Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 5.7e-127 457.6 233 100.0
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 2.5e-50 203.0 165 69.1
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 4.3e-50 202.2 164 71.3
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 2.4e-48 196.4 166 68.1
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 8.7e-43 177.9 158 62.0
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.1e-42 177.6 128 72.7
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.9e-42 176.8 140 68.6
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 1.9e-42 176.8 167 59.9
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 1.9e-42 176.8 157 63.1
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 3.3e-42 176.0 126 73.0
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 3.3e-42 176.0 184 56.0
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 3.3e-42 176.0 167 62.3
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 3.3e-42 176.0 122 74.6
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.3e-42 176.0 122 76.2
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.3e-42 175.6 114 78.1
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 7.4e-42 174.9 122 73.8
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 7.4e-42 174.9 139 70.5
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 7.4e-42 174.9 169 58.6
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.3e-41 174.1 123 72.4
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.6e-41 173.7 122 73.8
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.6e-41 173.7 176 54.0
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 2.2e-41 173.3 167 61.7
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 2.2e-41 173.3 167 61.7
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 4.8e-41 172.2 124 72.6
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 4.8e-41 172.2 143 66.4
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 6.3e-41 171.8 144 64.6
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 6.3e-41 171.8 144 61.8
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 8.2e-41 171.4 155 61.3
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.1e-40 171.0 128 71.1
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.1e-40 171.0 144 64.6
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 1.1e-40 171.0 142 64.8
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 1.1e-40 171.0 169 56.2
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 1.4e-40 170.6 131 74.0
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 2.4e-40 169.9 165 61.2
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 3.1e-40 169.5 118 72.9
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.5e-39 167.2 122 68.9
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.5e-39 167.2 126 71.4
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 2.0e-39 166.8 167 57.5
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 2.0e-39 166.8 143 63.6
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.6e-39 166.4 182 54.9
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 3.4e-39 166.0 137 68.6
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.5e-39 165.6 182 56.0
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 4.5e-39 165.6 119 70.6
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 5.9e-39 165.2 113 76.1
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.0e-38 164.5 120 72.5
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 1.0e-38 164.5 114 74.6
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 1.0e-38 164.5 140 63.6
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.7e-38 163.7 125 69.6
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 1.7e-38 163.7 128 70.3
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 2.2e-38 163.3 140 62.9
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 2.9e-38 162.9 203 51.2
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 2.9e-38 162.9 111 73.9
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 6.5e-38 161.8 168 56.5
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 8.5e-38 161.4 150 62.0
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 8.5e-38 161.4 111 74.8
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.1e-37 161.0 148 58.8
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.1e-37 161.0 154 57.8
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 1.1e-37 161.0 167 56.3
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 2.5e-37 159.8 162 53.7
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 2.5e-37 159.8 133 66.2
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 3.2e-37 159.5 133 65.4
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 4.2e-37 159.1 168 55.4
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 4.2e-37 159.1 124 67.7
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 5.5e-37 158.7 167 56.3
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.2e-36 157.5 133 64.7
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.2e-36 157.5 170 54.7
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 1.6e-36 157.1 123 66.7
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 2.1e-36 156.8 101 80.2
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 2.7e-36 156.4 127 66.1
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.7e-36 156.4 170 54.7
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 3.6e-36 156.0 129 68.2
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 6.1e-36 155.2 137 62.8
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 1.0e-35 154.5 148 60.8
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.0e-35 154.5 197 49.2
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 2.3e-35 153.3 134 62.7
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 3.9e-35 152.5 127 64.6
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 3.9e-35 152.5 125 66.4
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 6.7e-35 151.8 108 72.2
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 6.7e-35 151.8 108 72.2
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 6.7e-35 151.8 169 51.5
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 6.7e-35 151.8 133 64.7
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 1.9e-34 150.2 166 54.8
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 1.9e-34 150.2 118 69.5
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.9e-34 150.2 122 68.0
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 7.4e-34 148.3 165 55.2
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 4.8e-33 145.6 148 57.4
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 8.2e-33 144.8 101 74.3
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 2.9e-30 136.3 102 67.6
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 8.5e-30 134.8 139 55.4
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 5.5e-29 132.1 117 64.1
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 7.9e-28 128.3 145 53.1
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 6.9e-24 115.2 90 66.7
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.2e-23 114.4 109 60.6
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 1.3e-22 110.9 136 50.7
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 3.8e-22 109.4 77 74.0
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 1.4e-21 107.5 202 44.6
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 1.9e-21 107.1 71 80.3
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 1.9e-21 107.1 108 59.3
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 5.5e-21 105.5 75 76.0
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 2.7e-20 103.2 71 76.1
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.7e-20 103.2 75 76.0
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.3e-19 100.1 71 77.5
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.3e-19 100.1 71 77.5
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.0e-19 99.8 71 69.0
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 2.6e-18 96.7 80 63.8
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 7.4e-18 95.1 72 69.4
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 4.8e-17 92.4 183 34.4
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.4e-16 90.9 107 51.4
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 2.6e-15 86.7 115 46.1
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.5e-13 80.1 71 63.4
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 7.2e-13 78.6 75 57.3
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 8.8e-11 71.6 46 78.3
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 1.7e-09 67.4 90 36.7
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.0e-07 60.5 69 47.8
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 2.2e-06 57.0 31 83.9
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 2.2e-06 57.0 31 83.9


User provided reference genes

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