Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25689 Striga asiatica HOM05D004810 ORTHO05D006272 0.0e+00 3030.0 1476 100.0
MSTRG.21726 Avicennia marina HOM05D004810 ORTHO05D006272 0.0e+00 1937.5 1405 69.5
GSVIVG01028203001 Vitis vinifera HOM05D004810 ORTHO05D006272 0.0e+00 1369.0 1399 52.6
Potri.002G189400 Populus trichocarpa HOM05D004810 ORTHO05D006272 0.0e+00 1368.6 1411 51.3
Sopen01g030000 Solanum pennellii HOM05D004810 ORTHO05D006272 0.0e+00 1360.9 1406 51.3
Rhsim13G0000700 Rhododendron simsii HOM05D004810 ORTHO05D006272 0.0e+00 1350.1 1422 51.7
Ciclev10018506m.g Citrus clementina HOM05D004810 ORTHO05D006272 0.0e+00 1341.3 1414 50.8
QL12p034348 Quercus lobata HOM05D004810 ORTHO05D006272 0.0e+00 1337.4 1461 50.0
Thecc.01G322600 Theobroma cacao HOM05D004810 ORTHO05D006272 0.0e+00 1328.9 1413 50.2
Cfa004881 Carpinus fangiana HOM05D004810 ORTHO05D006272 0.0e+00 1328.2 1418 50.7
Lj1g0015466 Lotus japonicus HOM05D004810 ORTHO05D006272 0.0e+00 1328.2 1411 50.5
Cc01_g21880 Coffea canephora HOM05D004810 ORTHO05D006272 0.0e+00 1327.4 1484 49.1
MD09G1293000 Malus domestica HOM05D004810 ORTHO05D006272 0.0e+00 1321.6 1402 50.8
RcHm_v2.0_Chr3g0486381 Rosa chinensis HOM05D004810 ORTHO05D006272 0.0e+00 1319.3 1408 50.6
FAN19G2038 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1313.1 1401 49.9
FvH4_1g26470 Fragaria vesca HOM05D004810 ORTHO05D006272 0.0e+00 1312.4 1401 50.0
Medtr7g110260 Medicago truncatula HOM05D004810 ORTHO05D006272 0.0e+00 1311.6 1403 50.2
TPR.G4131 Trifolium pratense HOM05D004810 ORTHO05D006272 0.0e+00 1311.2 1387 50.9
Sabra02G0166300 Salix brachista HOM05D004810 ORTHO05D006272 0.0e+00 1306.2 1488 48.2
Duzib138G1217 Durio zibethinus HOM05D004810 ORTHO05D006272 0.0e+00 1303.9 1412 50.0
FAN23G0904 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1301.6 1401 49.7
Haze_05120 Corylus avellana HOM05D004810 ORTHO05D006272 0.0e+00 1297.0 1470 49.0
FAN26G0889 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1296.6 1402 49.9
Nn3g21885 Nelumbo nucifera HOM05D004810 ORTHO05D006272 0.0e+00 1294.6 1414 50.1
Phvul.001G216500 Phaseolus vulgaris HOM05D004810 ORTHO05D006272 0.0e+00 1294.3 1413 49.9
Nitab4.5_0000222g0280 Nicotiana tabacum HOM05D004810 ORTHO05D006272 0.0e+00 1293.9 1427 49.1
Prupe.3G004200 Prunus persica HOM05D004810 ORTHO05D006272 0.0e+00 1293.5 1407 49.7
DCAR_018250 Daucus carota HOM05D004810 ORTHO05D006272 0.0e+00 1285.8 1466 48.8
Gorai.008G136000 Gossypium raimondii HOM05D004810 ORTHO05D006272 0.0e+00 1282.7 1420 49.0
Glyma.19G220100 Glycine max HOM05D004810 ORTHO05D006272 0.0e+00 1281.9 1402 49.3
Ca_09236_v3 Cicer arietinum L. HOM05D004810 ORTHO05D006272 0.0e+00 1279.6 1419 49.0
Lalb_Chr04g0260131 Lupinus albus HOM05D004810 ORTHO05D006272 0.0e+00 1279.6 1394 49.1
TAR362G0253 Trochodendron aralioides HOM05D004810 ORTHO05D006272 0.0e+00 1278.8 1412 50.1
TWI14G1319 Tripterygium wilfordii HOM05D004810 ORTHO05D006272 0.0e+00 1272.3 1417 47.7
CsaV3_3G031590 Cucumis sativus L. HOM05D004810 ORTHO05D006272 0.0e+00 1268.8 1402 48.7
Sed0025982 Sechium edule HOM05D004810 ORTHO05D006272 0.0e+00 1267.7 1405 49.6
Eucgr.K00589 Eucalyptus grandis HOM05D004810 ORTHO05D006272 0.0e+00 1266.1 1421 48.9
Manes.05G010600 Manihot esculenta HOM05D004810 ORTHO05D006272 0.0e+00 1263.8 1359 49.4
CiPaw.07G123600 Carya illinoinensis HOM05D004810 ORTHO05D006272 0.0e+00 1263.1 1417 48.8
Actinidia21354 Actinidia chinensis HOM05D004810 ORTHO05D006272 0.0e+00 1261.1 1392 49.8
Aqoxy5G02779 Aquilegia oxysepala HOM05D004810 ORTHO05D006272 0.0e+00 1258.4 1413 47.9
THA.LOC104825930 Tarenaya hassleriana HOM05D004810 ORTHO05D006272 0.0e+00 1254.2 1382 48.0
PGR142G2149 Punica granatum HOM05D004810 ORTHO05D006272 0.0e+00 1251.9 1390 48.7
HanXRQChr06g0167991 Helianthus annuus HOM05D004810 ORTHO05D006272 0.0e+00 1249.6 1368 49.2
AT4G01860 Arabidopsis thaliana HOM05D004810 ORTHO05D006272 0.0e+00 1241.1 1387 47.4
AUR62011731 Chenopodium quinoa HOM05D004810 ORTHO05D006272 0.0e+00 1239.2 1395 47.9
arahy.Tifrunner.gnm1.ann1.NAX4N2 Arachis hypogaea HOM05D004810 ORTHO05D006272 0.0e+00 1233.0 1399 48.2
BcaB01g02106 Brassica carinata HOM05D004810 ORTHO05D006272 0.0e+00 1228.0 1392 46.8
PSO170G6261 Papaver somniferum HOM05D004810 ORTHO05D006272 0.0e+00 1227.2 1411 47.7
arahy.Tifrunner.gnm1.ann1.RS5E8T Arachis hypogaea HOM05D004810 ORTHO05D006272 0.0e+00 1226.1 1403 47.9
COL.COLO4_23155 Corchorus olitorius HOM05D004810 ORTHO05D006272 0.0e+00 1224.5 1411 47.6
PSO357G0647 Papaver somniferum HOM05D004810 ORTHO05D006272 0.0e+00 1224.2 1410 47.4
EL10As5g23578 Beta vulgaris HOM05D004810 ORTHO05D006272 0.0e+00 1223.0 1431 47.0
Aa31LG5G1530 Aethionema arabicum HOM05D004810 ORTHO05D006272 0.0e+00 1222.2 1398 46.7
AL6G51450 Arabidopsis lyrata HOM05D004810 ORTHO05D006272 0.0e+00 1219.1 1384 46.8
A09p01330 Brassica napus HOM05D004810 ORTHO05D006272 0.0e+00 1219.1 1392 47.3
Sp6g01700 Schrenkiella parvula HOM05D004810 ORTHO05D006272 0.0e+00 1216.8 1388 47.0
MELO3C012913.2 Cucumis melo HOM05D004810 ORTHO05D006272 0.0e+00 1213.0 1396 47.5
Thhalv10027621m.g Eutrema salsugineum HOM05D004810 ORTHO05D006272 0.0e+00 1213.0 1392 47.1
BraA09t35800Z Brassica rapa HOM05D004810 ORTHO05D006272 0.0e+00 1212.2 1397 46.9
C09p01390 Brassica napus HOM05D004810 ORTHO05D006272 0.0e+00 1211.8 1394 47.0
Carub.0006s3538 Capsella rubella HOM05D004810 ORTHO05D006272 0.0e+00 1211.8 1391 46.4
VMungo1383G1823 Vigna mungo HOM05D004810 ORTHO05D006272 0.0e+00 1205.3 1379 48.4
BcaC04g24069 Brassica carinata HOM05D004810 ORTHO05D006272 0.0e+00 1201.4 1394 46.6
BolC9t53072H Brassica oleracea HOM05D004810 ORTHO05D006272 0.0e+00 1201.4 1394 46.7
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 0.0e+00 1192.9 1349 48.3
Lsat_1_v5_gn_8_167321 Lactuca sativa HOM05D004810 ORTHO05D006272 0.0e+00 1187.6 1385 47.4
Hma1.2p1_0484F.1_g162890 Hydrangea macrophylla HOM05D004810 ORTHO05D006272 0.0e+00 1176.8 1152 54.0
MBI18_g09625_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D006272 0.0e+00 1174.1 1419 47.5
Psat3g018400 Pisum sativum HOM05D004810 ORTHO05D006272 0.0e+00 1168.7 1396 46.3
ClCG10G011790 Citrullus lanatus HOM05D004810 ORTHO05D006272 0.0e+00 1155.2 1364 46.9
FAN28G1956 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1150.2 1477 44.2
Atru.chr5.899 Acer truncatum HOM05D004810 ORTHO05D006272 0.0e+00 1134.4 1180 51.3
Hund09692 Selenicereus undatus HOM05D004810 ORTHO05D006272 0.0e+00 1132.9 1388 46.5
ATR0796G051 Amborella trichopoda HOM05D004810 ORTHO05D006272 0.0e+00 1130.9 1430 45.2
Lj2C1214G2 Lonicera japonica HOM05D004810 ORTHO05D006272 0.0e+00 1129.8 1387 46.9
CDE05G2014 Ceratophyllum demersum HOM05D004810 ORTHO05D006272 0.0e+00 1114.0 1414 45.3
Os03g0111800 Oryza sativa ssp. japonica HOM05D004810 ORTHO05D006272 0.0e+00 1085.9 1382 44.3
Migut.D00026 Erythranthe guttata HOM05D004810 ORTHO05D006272 1.5e-310 1070.1 732 71.7
Gohir.A12G121200 Gossypium hirsutum HOM05D004810 ORTHO05D006272 4.4e-310 1068.5 1179 48.7
HPP92_017301 Vanilla planifolia HOM05D004810 ORTHO05D006272 1.2e-307 1060.4 1415 44.2
Sc18g0007580 Simmondsia chinensis HOM05D004810 ORTHO05D006272 1.7e-301 1040.0 1097 50.8
Hma1.2p1_0484F.1_g162880 Hydrangea macrophylla HOM05D004810 ORTHO05D006272 1.4e-290 1003.8 979 54.0
CSS0014565 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 3.3e-289 999.2 1077 50.8
CSS0019531 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 2.4e-287 993.0 1063 50.4
Dinv12098 Davidia involucrata HOM05D004810 ORTHO05D006272 3.1e-287 992.6 987 53.5
CARHR249820 Cardamine hirsuta HOM05D004810 ORTHO05D006272 3.0e-282 976.1 1046 48.4
Nitab4.5_0002994g0090 Nicotiana tabacum HOM05D004810 ORTHO05D006272 6.6e-261 905.2 1410 39.8
unitig_62.g23902 Utricularia gibba HOM05D004810 ORTHO05D006272 7.5e-249 865.1 1351 40.2
Gohir.D12G125000 Gossypium hirsutum HOM05D004810 ORTHO05D006272 5.6e-236 822.4 966 47.1
Oeu044753.1 Olea europaea HOM05D004810 ORTHO05D006272 7.3e-236 822.0 781 56.3
Migut.D00025 Erythranthe guttata HOM05D004810 ORTHO05D006272 2.0e-233 813.9 649 65.6
vmacro02367 Vaccinium macrocarpon HOM05D004810 ORTHO05D006272 3.8e-224 783.1 878 49.9
Pp3c3_23690 Physcomitrium patens HOM05D004810 ORTHO05D006272 9.3e-223 778.5 1483 35.7
Oeu044752.1 Olea europaea HOM05D004810 ORTHO05D006272 2.3e-221 773.9 595 64.2
Mapoly0020s0127 Marchantia polymorpha HOM05D004810 ORTHO05D006272 3.4e-217 760.0 1505 33.3
AagrBONN_evm.TU.Sc2ySwM_344.1995 Anthoceros agrestis HOM05D004810 ORTHO05D006272 1.6e-206 724.5 1498 32.9
AUR62024565 Chenopodium quinoa HOM05D004810 ORTHO05D006272 1.1e-180 638.6 854 43.7
CANSAT21G0194 Cannabis sativa HOM05D004810 ORTHO05D006272 5.9e-169 599.7 593 51.1
Cpa.g.sc67.77 Carica papaya HOM05D004810 ORTHO05D006272 3.8e-168 597.0 605 50.4
vmacro02368 Vaccinium macrocarpon HOM05D004810 ORTHO05D006272 2.7e-158 564.3 586 51.5
SEGI_19859 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 5.9e-153 546.6 788 40.7
Zm00001eb404090 Zea mays HOM05D004810 ORTHO05D006272 3.2e-151 540.8 799 40.9
SMO137G0268 Selaginella moellendorffii HOM05D004810 ORTHO05D006272 8.0e-142 509.6 1349 30.5
SEGI_21204 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 2.4e-138 498.0 881 37.3
FAN10G1333 Fragaria x ananassa HOM05D004810 ORTHO05D006272 3.7e-131 474.2 656 43.0
Dinv12097 Davidia involucrata HOM05D004810 ORTHO05D006272 2.4e-98 365.2 386 51.8
MD17G1281400 Malus domestica HOM05D004810 ORTHO05D006272 5.8e-84 317.4 314 50.3
SHI15445 Sapria himalayana HOM05D004810 ORTHO05D006272 3.8e-83 314.7 435 43.9
SHI15448 Sapria himalayana HOM05D000105 ORTHO05D000023 9.6e-79 300.1 350 46.9
SEGI_09896 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 1.3e-67 263.1 304 46.7
MCO01G012 Micromonas commoda HOM05D004810 ORTHO05D006272 1.1e-66 260.0 1625 23.7
MD17G1281300 Malus domestica HOM05D004810 ORTHO05D006272 1.9e-58 232.6 333 41.7
Psat4g129960 Pisum sativum HOM05D004810 ORTHO05D006272 8.8e-56 223.8 202 54.5
PRCOL_00001957 Prasinoderma coloniale HOM05D004810 ORTHO05D006272 4.4e-55 221.5 847 25.4
MD17G1281700 Malus domestica HOM05D004810 ORTHO05D006272 1.1e-53 216.9 274 47.8
SEGI_37781 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 5.9e-52 211.1 302 43.0
RcHm_v2.0_Chr3g0486501 Rosa chinensis HOM05D004810 ORTHO05D006272 2.5e-50 205.7 248 50.0
SHI15450 Sapria himalayana HOM05D000105 ORTHO05D000023 3.0e-48 198.7 381 34.1
Cpa.g.sc3588.1 Carica papaya HOM05D004810 ORTHO05D006272 1.5e-47 196.4 239 49.4
Atru.chr5.900 Acer truncatum HOM05D004810 ORTHO05D006272 6.3e-46 191.0 186 53.8
A02p42710 Brassica napus HOM05D004810 ORTHO05D006272 1.6e-44 186.4 202 48.5
Solyc01g068070.4 Solanum lycopersicum HOM05D004810 ORTHO05D006272 1.0e-40 173.7 217 47.5
RcHm_v2.0_Chr3g0486491 Rosa chinensis HOM05D004810 ORTHO05D006272 5.7e-39 167.9 205 45.9
Gohir.A12G121250 Gossypium hirsutum HOM05D004810 ORTHO05D006272 4.1e-37 161.8 181 49.2
CBR_g26439 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-33 149.4 621 24.8
RcHm_v2.0_Chr3g0486511 Rosa chinensis HOM05D004810 ORTHO05D006272 1.1e-29 137.1 199 40.7
MD17G1281800 Malus domestica HOM05D004810 ORTHO05D006272 4.5e-28 131.7 98 63.3
Psat0s2464g0040 Pisum sativum HOM05D004810 ORTHO05D006272 1.3e-27 130.2 111 55.0
SEGI_39451 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 5.6e-26 124.8 156 40.4
SHI15443 Sapria himalayana HOM05D004810 ORTHO05D006272 1.4e-24 120.2 256 34.0
FAN24G0870 Fragaria x ananassa HOM05D004810 ORTHO05D006272 3.4e-23 115.5 161 40.4
CAN.G100.30 Capsicum annuum HOM05D004810 ORTHO05D006272 6.4e-22 111.3 85 58.8
Psat0s3766g0080 Pisum sativum HOM05D002292 ORTHO05D006272 1.1e-21 110.5 73 63.0
Actinidia06394 Actinidia chinensis HOM05D004810 ORTHO05D006272 5.4e-21 108.2 137 42.3
RcHm_v2.0_Chr3g0486521 Rosa chinensis HOM05D004810 ORTHO05D006272 6.6e-19 101.3 109 47.7
Lsat_1_v5_gn_2_51680 Lactuca sativa HOM05D004810 ORTHO05D006272 3.6e-17 95.5 114 41.2
FvH4_2g08080 Fragaria vesca HOM05D004810 ORTHO05D006272 8.0e-17 94.4 116 41.4
MBI14_g40313_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 3.2e-13 82.4 63 61.9
MBI15_g23571_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 3.2e-13 82.4 63 61.9
Zm00001eb241980 Zea mays HOM05D004810 ORTHO05D006272 2.7e-12 79.3 85 48.2
MBI13_g10212_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 4.6e-12 78.6 63 60.3
MBI14_g17170_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 6.6e-11 74.7 56 66.1
Actinidia06392 Actinidia chinensis HOM05D004810 ORTHO05D006272 1.2e-09 70.5 55 60.0
MBI19_g30553_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 2.1e-09 69.7 56 64.3
CBR_g26440 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-08 67.4 39 66.7
C02p62710 Brassica napus HOM05D004810 ORTHO05D006272 2.3e-08 66.2 83 45.8
Hund09691 Selenicereus undatus HOM05D004810 ORTHO05D006272 5.2e-08 65.1 87 47.1
FvH4_6g28340 Fragaria vesca HOM05D003050 ORTHO05D006272 3.4e-07 62.4 74 45.9
Cre04.g217991 Chlamydomonas reinhardtii HOM05D004810 ORTHO05D006272 3.7e-06 58.9 104 34.6
FAN14G3945 Fragaria x ananassa HOM05D004810 ORTHO05D029461 6.4e-06 58.2 53 50.9


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