Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 3.3e-95 351.7 172 100.0
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 4.8e-30 135.2 172 44.8
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 7.2e-26 121.3 172 42.4
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 1.2e-25 120.6 173 42.2
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 4.6e-25 118.6 172 41.3
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 4.6e-25 118.6 172 41.9
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 4.6e-25 118.6 169 42.6
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 6.1e-25 118.2 169 42.6
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 1.3e-24 117.1 173 41.0
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 1.8e-24 116.7 173 40.5
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 2.3e-24 116.3 172 41.9
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 2.3e-24 116.3 173 45.1
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 2.3e-24 116.3 169 42.0
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 5.1e-24 115.2 172 40.1
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 5.1e-24 115.2 173 41.0
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 1.5e-23 113.6 172 41.3
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 1.5e-23 113.6 172 39.5
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 1.9e-23 113.2 172 40.1
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 2.5e-23 112.8 172 39.5
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 2.5e-23 112.8 174 40.8
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 1.3e-22 110.5 172 41.3
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 1.7e-22 110.2 172 40.1
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 2.2e-22 109.8 174 40.2
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 2.8e-22 109.4 172 39.5
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 3.7e-22 109.0 172 40.1
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 4.8e-22 108.6 172 39.5
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 6.3e-22 108.2 172 40.7
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 6.3e-22 108.2 172 39.5
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 1.1e-21 107.5 172 40.1
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 1.8e-21 106.7 167 44.3
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 1.8e-21 106.7 172 39.5
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 1.8e-21 106.7 172 38.4
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 3.1e-21 105.9 172 39.0
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 4.1e-21 105.5 172 40.7
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 3.4e-20 102.4 173 39.9
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 3.4e-20 102.4 172 39.0
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 3.4e-20 102.4 173 38.2
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 7.7e-20 101.3 186 39.2
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 2.2e-19 99.8 174 37.4
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 2.9e-19 99.4 167 38.3
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 2.9e-19 99.4 173 39.3
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 3.8e-19 99.0 173 38.2
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 6.5e-19 98.2 173 38.7
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 8.5e-19 97.8 179 36.9
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 1.1e-18 97.4 175 40.0
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 1.1e-18 97.4 173 39.3
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 1.9e-18 96.7 173 40.5
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 4.2e-18 95.5 173 38.7
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 1.2e-17 94.0 172 36.0
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 3.6e-17 92.4 169 36.7
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 3.6e-17 92.4 181 36.5
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 4.7e-17 92.0 178 36.0
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 4.7e-17 92.0 151 38.4
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 2.3e-16 89.7 151 37.1
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 6.7e-16 88.2 154 38.3
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 1.5e-15 87.0 150 38.0
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 1.7e-14 83.6 150 34.0
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 1.7e-14 83.6 154 33.8
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 6.3e-14 81.6 173 34.7
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 1.4e-13 80.5 53 67.9
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 4.5e-12 75.5 52 63.5
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 7.7e-12 74.7 53 62.3
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 7.7e-12 74.7 53 62.3
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 1.0e-11 74.3 53 62.3
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 1.3e-11 73.9 160 35.0
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 1.3e-11 73.9 53 62.3
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 1.7e-11 73.6 53 64.2
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 1.7e-11 73.6 55 61.8
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 2.9e-11 72.8 52 59.6
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 2.9e-11 72.8 67 55.2
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 5.0e-11 72.0 53 64.2
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 5.0e-11 72.0 161 36.6
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 3.2e-10 69.3 53 64.2
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 3.2e-10 69.3 53 60.4
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 7.2e-10 68.2 64 54.7
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 7.2e-10 68.2 53 58.5
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 7.2e-10 68.2 66 50.0
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 9.4e-10 67.8 53 60.4
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 1.2e-09 67.4 53 60.4
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 1.6e-09 67.0 69 53.6
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 8.0e-09 64.7 50 64.0
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 1.0e-08 64.3 176 31.8
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 3.9e-08 62.4 53 58.5
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 8.8e-08 61.2 51 58.8
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 1.7e-06 57.0 50 52.0
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 1.7e-06 57.0 59 44.1
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 3.7e-06 55.8 58 48.3
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 6.3e-06 55.1 49 55.1
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 6.3e-06 55.1 64 42.2


User provided reference genes

Program Settings