Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold802G53622 Striga asiatica HOM05D021350 ORTHO05D001299 6.7e-54 213.8 109 100.0
SGA_v2.0_scaffold789G53605 Striga asiatica HOM05D021350 ORTHO05D001299 2.9e-12 75.5 41 87.8
SalBow2G0883 Salvia bowleyana HOM05D001557 ORTHO05D001299 8.3e-12 73.9 73 53.4
SGA_v2.0_scaffold250G44994 Striga asiatica HOM05D021350 ORTHO05D404333 4.1e-11 71.6 41 82.9
SGA_v2.0_scaffold40G15388 Striga asiatica HOM05D021350 ORTHO05D001299 4.1e-11 71.6 41 82.9
SGA_v2.0_scaffold63G21642 Striga asiatica HOM05D001557 ORTHO05D001299 4.1e-11 71.6 66 57.6
SGA_v2.0_scaffold38G15101 Striga asiatica HOM05D021350 ORTHO05D403848 3.5e-10 68.6 41 80.5
Cc11_g12840 Coffea canephora HOM05D001557 ORTHO05D001299 1.7e-09 66.2 75 50.7
Migut.L01276 Erythranthe guttata HOM05D001557 ORTHO05D001299 1.7e-09 66.2 64 57.8
unitig_21.g20420 Utricularia gibba HOM05D001557 ORTHO05D001299 3.9e-09 65.1 65 55.4
Actinidia12293 Actinidia chinensis HOM05D001557 ORTHO05D001299 1.1e-08 63.5 66 48.5
CSS0022504 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.1e-08 63.5 70 47.1
CSS0035188 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.1e-08 63.5 70 47.1
RcHm_v2.0_Chr4g0439561 Rosa chinensis HOM05D001557 ORTHO05D001299 1.9e-08 62.8 88 43.2
Migut.E00082 Erythranthe guttata HOM05D001557 ORTHO05D001299 2.5e-08 62.4 61 54.1
SGA_v2.0_scaffold172G38963 Striga asiatica HOM05D001557 ORTHO05D001299 3.3e-08 62.0 63 50.8
MSTRG.712 Avicennia marina HOM05D001557 ORTHO05D001299 5.6e-08 61.2 67 47.8
Dinv16661 Davidia involucrata HOM05D001557 ORTHO05D001299 5.6e-08 61.2 64 51.6
SalBow8G0091 Salvia bowleyana HOM05D001557 ORTHO05D001299 5.6e-08 61.2 93 43.0
CSS0019472 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.2e-07 60.1 70 45.7
CSS0012568 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 2.8e-07 58.9 66 45.5
CSS0039687 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 2.8e-07 58.9 66 45.5
Lj3P1036T14 Lonicera japonica HOM05D001557 ORTHO05D001299 2.8e-07 58.9 69 47.8
Glyma.01G049900 Glycine max HOM05D001557 ORTHO05D001299 3.6e-07 58.5 66 48.5
Nitab4.5_0004623g0020 Nicotiana tabacum HOM05D001557 ORTHO05D001299 4.7e-07 58.2 64 48.4
CAN.G1580.1 Capsicum annuum HOM05D001557 ORTHO05D001299 1.1e-06 57.0 63 52.4
Glyma.02G108900 Glycine max HOM05D001557 ORTHO05D001299 1.1e-06 57.0 71 45.1
Manes.01G034700 Manihot esculenta HOM05D001557 ORTHO05D001299 1.4e-06 56.6 67 47.8
FAN07G1395 Fragaria x ananassa HOM05D001557 ORTHO05D001299 5.2e-06 54.7 72 48.6
Lsat_1_v5_gn_3_54060 Lactuca sativa HOM05D001557 ORTHO05D001299 6.8e-06 54.3 63 47.6
Nitab4.5_0000040g0140 Nicotiana tabacum HOM05D001557 ORTHO05D001299 6.8e-06 54.3 64 46.9
GSVIVG01010499001 Vitis vinifera HOM05D001557 ORTHO05D001299 8.9e-06 53.9 126 34.9


User provided reference genes

Program Settings