Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 8.9e-48 193.4 103 100.0
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 6.4e-38 160.6 103 83.5
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 8.3e-38 160.2 103 83.5
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 3.6e-33 144.8 96 80.2
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 3.1e-32 141.7 102 76.5
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 4.0e-32 141.4 104 74.0
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 2.6e-31 138.7 103 75.7
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 4.4e-31 137.9 102 73.5
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 5.8e-31 137.5 103 74.8
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 5.8e-31 137.5 103 74.8
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 7.5e-31 137.1 103 73.8
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.7e-30 136.0 103 75.7
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 2.2e-30 135.6 109 67.0
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 3.7e-30 134.8 103 72.8
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 8.3e-30 133.7 102 70.6
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 1.1e-29 133.3 104 69.2
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 2.4e-29 132.1 99 73.7
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 5.4e-29 131.0 102 67.6
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 9.2e-29 130.2 99 71.7
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 1.2e-28 129.8 103 68.0
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 1.6e-28 129.4 104 66.3
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.6e-28 129.4 105 67.6
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 1.6e-28 129.4 102 69.6
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 2.1e-28 129.0 104 68.3
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 3.5e-28 128.3 102 68.6
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 4.6e-28 127.9 107 69.2
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 4.6e-28 127.9 105 66.7
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 4.6e-28 127.9 103 66.0
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 6.0e-28 127.5 107 69.2
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 1.0e-27 126.7 101 69.3
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 1.0e-27 126.7 104 69.2
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.0e-27 126.7 105 66.7
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 1.3e-27 126.3 101 69.3
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 1.3e-27 126.3 101 69.3
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 1.3e-27 126.3 103 69.9
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 1.3e-27 126.3 101 69.3
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 1.7e-27 125.9 104 67.3
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 2.3e-27 125.6 107 68.2
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.3e-27 125.6 107 68.2
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 3.0e-27 125.2 108 66.7
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 3.9e-27 124.8 100 70.0
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 5.1e-27 124.4 101 68.3
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 6.6e-27 124.0 104 66.3
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 6.6e-27 124.0 102 66.7
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 6.6e-27 124.0 100 64.0
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 1.1e-26 123.2 102 64.7
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 1.5e-26 122.9 101 67.3
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 1.5e-26 122.9 101 67.3
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 1.5e-26 122.9 101 67.3
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 1.5e-26 122.9 101 67.3
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 2.5e-26 122.1 101 64.4
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 2.5e-26 122.1 105 63.8
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 2.5e-26 122.1 104 66.3
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 4.3e-26 121.3 103 65.0
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 4.3e-26 121.3 104 63.5
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 7.3e-26 120.6 104 64.4
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 9.5e-26 120.2 100 67.0
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 9.5e-26 120.2 107 62.6
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 9.5e-26 120.2 97 67.0
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 9.5e-26 120.2 104 63.5
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 2.8e-25 118.6 104 62.5
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 6.2e-25 117.5 103 65.0
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 1.1e-24 116.7 100 67.0
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.8e-24 115.9 104 60.6
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 1.8e-24 115.9 102 61.8
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 3.1e-24 115.2 98 63.3
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 5.2e-24 114.4 106 59.4
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 6.8e-24 114.0 124 59.7
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 1.2e-23 113.2 107 61.7
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 1.2e-23 113.2 104 60.6
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 1.2e-23 113.2 101 61.4
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.5e-23 112.8 105 59.0
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 2.0e-23 112.5 104 58.7
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 3.4e-23 111.7 102 61.8
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 4.4e-23 111.3 103 63.1
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 5.8e-23 110.9 104 59.6
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 5.8e-23 110.9 105 59.0
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 9.9e-23 110.2 103 61.2
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.7e-22 109.4 105 57.1
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 2.2e-22 109.0 104 57.7
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 2.9e-22 108.6 104 57.7
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 8.4e-22 107.1 95 62.1
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 2.7e-20 102.1 107 52.3
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 6.0e-20 100.9 103 53.4
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 1.0e-19 100.1 67 77.6
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 3.9e-19 98.2 81 67.9
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 5.1e-19 97.8 82 65.9
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 8.7e-19 97.1 62 85.5
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 8.7e-19 97.1 117 51.3
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 1.5e-18 96.3 82 64.6
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 2.5e-18 95.5 65 78.5
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 3.3e-18 95.1 87 59.8
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.3e-17 93.2 106 55.7
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 2.8e-17 92.0 62 75.8
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 3.6e-17 91.7 65 72.3
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 6.2e-17 90.9 65 72.3
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 1.1e-16 90.1 61 78.7
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 1.4e-16 89.7 68 72.1
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 1.8e-16 89.4 53 86.8
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 2.0e-15 85.9 103 50.5
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 2.6e-15 85.5 52 88.5
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 9.9e-15 83.6 50 88.0
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.2e-14 82.4 56 82.1
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 2.9e-14 82.0 50 84.0
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 7.1e-13 77.4 53 75.5
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 9.3e-13 77.0 68 60.3
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 6.2e-09 64.3 39 82.1
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 2.9e-06 55.5 104 36.5
SMO203G0278 Selaginella moellendorffii HOM05D000001 ORTHO05D375656 8.4e-06 53.9 61 54.1


User provided reference genes

Program Settings