Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.8e-125 452.6 223 100.0
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 6.5e-104 380.9 224 84.8
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.1e-102 375.9 223 81.6
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.1e-102 375.9 223 81.6
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 3.0e-101 372.1 223 81.2
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 5.7e-100 367.9 228 79.8
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.7e-99 366.3 225 80.0
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 4.1e-98 361.7 231 79.7
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 1.6e-97 359.8 229 77.7
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 4.5e-97 358.2 227 77.1
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 7.7e-97 357.5 227 76.7
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.3e-96 356.7 222 79.3
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.3e-96 356.7 225 78.7
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 1.7e-96 356.3 230 77.8
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 2.9e-96 355.5 232 76.7
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.8e-96 355.1 224 77.2
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.8e-96 355.1 224 77.2
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 1.9e-95 352.8 224 76.8
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 2.5e-95 352.4 223 76.2
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.2e-95 351.7 224 76.8
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.2e-95 351.7 224 76.8
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 4.2e-95 351.7 227 77.1
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 7.2e-95 350.9 224 75.9
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 1.6e-94 349.7 232 74.6
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 2.7e-94 349.0 228 77.2
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 4.7e-94 348.2 221 76.5
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 6.1e-94 347.8 224 76.3
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 8.0e-94 347.4 225 76.9
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 8.0e-94 347.4 224 75.0
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 8.0e-94 347.4 226 75.2
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.4e-93 346.7 230 76.1
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 1.8e-93 346.3 228 76.8
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 2.3e-93 345.9 230 76.1
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 5.2e-93 344.7 228 75.9
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 1.1e-92 343.6 259 68.3
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 1.5e-92 343.2 224 75.4
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.5e-92 343.2 226 73.9
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 2.0e-92 342.8 218 77.1
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 2.0e-92 342.8 225 74.7
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 2.0e-92 342.8 245 71.4
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 2.0e-92 342.8 230 75.2
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 2.0e-92 342.8 224 77.7
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 2.6e-92 342.4 221 76.5
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 3.3e-92 342.0 225 75.6
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.3e-91 340.1 226 74.3
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 2.2e-91 339.3 226 77.0
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 4.8e-91 338.2 218 75.7
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 8.2e-91 337.4 227 73.6
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.1e-90 337.0 226 73.0
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 1.4e-90 336.7 226 73.9
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.8e-90 336.3 226 73.5
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 2.4e-90 335.9 236 71.2
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 2.4e-90 335.9 231 71.9
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 4.1e-90 335.1 222 73.4
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 7.0e-90 334.3 228 72.4
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 7.0e-90 334.3 225 74.2
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 1.6e-89 333.2 225 73.3
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 5.9e-89 331.3 222 73.0
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 5.9e-89 331.3 222 73.0
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 7.7e-89 330.9 222 73.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 7.7e-89 330.9 222 73.0
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 1.0e-88 330.5 225 72.9
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 1.0e-88 330.5 222 73.0
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.7e-88 329.7 230 71.3
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 2.2e-88 329.3 247 68.0
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 5.0e-88 328.2 222 72.5
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 6.5e-88 327.8 225 71.6
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 8.5e-88 327.4 224 72.8
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 8.5e-88 327.4 223 72.6
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 8.5e-88 327.4 226 73.5
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 3.2e-87 325.5 233 69.5
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 4.2e-87 325.1 228 72.8
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.2e-86 323.6 228 72.4
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.6e-86 323.2 221 70.6
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.0e-85 320.5 225 70.7
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.4e-85 320.1 208 75.0
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 1.4e-85 320.1 213 74.6
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 2.3e-85 319.3 227 70.9
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.0e-85 318.9 245 66.1
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 4.0e-85 318.5 226 70.4
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 8.8e-85 317.4 232 70.3
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 1.5e-84 316.6 205 76.1
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 1.3e-83 313.5 210 74.3
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 2.2e-83 312.8 215 72.1
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 7.0e-82 307.8 206 72.8
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 2.7e-81 305.8 207 72.9
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 3.8e-80 302.0 218 68.8
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 5.0e-80 301.6 223 68.6
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 1.1e-79 300.4 212 73.1
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 1.2e-78 297.0 228 67.5
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.0e-77 293.9 231 65.8
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 4.9e-75 285.0 226 66.8
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 4.1e-74 282.0 173 75.1
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 4.1e-74 282.0 152 85.5
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.1e-70 269.6 179 67.6
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 8.0e-70 267.7 209 67.9
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 1.0e-69 267.3 232 61.6
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 6.8e-69 264.6 169 78.1
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.5e-68 263.5 178 68.0
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 2.9e-67 259.2 225 60.4
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 5.4e-66 255.0 226 61.1
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 9.2e-66 254.2 209 65.1
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 8.6e-64 247.7 327 46.8
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 5.6e-63 245.0 147 76.2
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 4.7e-62 241.9 225 58.2
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 5.2e-61 238.4 125 89.6
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 4.9e-59 231.9 145 80.7
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.6e-57 226.9 221 56.1
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 3.5e-57 225.7 170 58.8
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 4.6e-57 225.3 152 73.0
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 1.9e-50 203.4 134 64.9
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.4e-45 187.2 194 50.0
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 3.0e-40 169.5 133 60.9
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.1e-37 161.0 159 48.4
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 9.9e-28 127.9 63 88.9
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 5.4e-26 122.1 84 66.7
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.1e-25 120.2 68 85.3
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.8e-24 117.1 63 77.8
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 3.6e-22 109.4 144 43.8
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.2e-19 100.1 92 57.6
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.6e-17 94.0 51 78.4


User provided reference genes

Program Settings