Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G04104 Striga asiatica HOM05D007939 ORTHO05D010027 3.9e-84 314.7 152 100.0
Oeu046758.2 Olea europaea HOM05D007939 ORTHO05D010027 1.3e-15 87.0 47 87.2
Nn3g17057 Nelumbo nucifera HOM05D007939 ORTHO05D010027 1.9e-14 83.2 43 88.4
Nn4g22962 Nelumbo nucifera HOM05D007939 ORTHO05D010027 1.9e-14 83.2 43 88.4
Oeu041591.1 Olea europaea HOM05D007939 ORTHO05D010027 1.9e-14 83.2 43 88.4
CsaV3_1G008140 Cucumis sativus L. HOM05D007939 ORTHO05D010027 4.3e-14 82.0 44 86.4
CSS0005245 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 9.5e-14 80.9 48 79.2
ClCG01G014170 Citrullus lanatus HOM05D007939 ORTHO05D010027 9.5e-14 80.9 43 88.4
MELO3C002231.2 Cucumis melo HOM05D007939 ORTHO05D010027 9.5e-14 80.9 43 88.4
Rhsim12G0160700 Rhododendron simsii HOM05D007939 ORTHO05D010027 9.5e-14 80.9 47 80.9
CiPaw.11G033900 Carya illinoinensis HOM05D007939 ORTHO05D010027 1.2e-13 80.5 43 86.0
Sed0024093 Sechium edule HOM05D007939 ORTHO05D010027 1.2e-13 80.5 43 86.0
Cc04_g16150 Coffea canephora HOM05D007939 ORTHO05D010027 1.6e-13 80.1 42 83.3
COL.COLO4_05795 Corchorus olitorius HOM05D007939 ORTHO05D010027 1.6e-13 80.1 46 80.4
CSS0025662 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 2.8e-13 79.3 47 78.7
Ciclev10023252m.g Citrus clementina HOM05D007939 ORTHO05D010027 2.8e-13 79.3 43 83.7
Potri.012G074300 Populus trichocarpa HOM05D007939 ORTHO05D010027 2.8e-13 79.3 43 83.7
Hund02701 Selenicereus undatus HOM05D007939 ORTHO05D010027 4.7e-13 78.6 44 81.8
Migut.D01894 Erythranthe guttata HOM05D007939 ORTHO05D010027 6.1e-13 78.2 44 86.4
Thecc.03G001700 Theobroma cacao HOM05D007939 ORTHO05D010027 6.1e-13 78.2 43 81.4
Manes.14G071800 Manihot esculenta HOM05D007939 ORTHO05D010027 8.0e-13 77.8 43 79.1
Cfa019042 Carpinus fangiana HOM05D007939 ORTHO05D010027 1.4e-12 77.0 43 81.4
Rhsim08G0164200 Rhododendron simsii HOM05D007939 ORTHO05D010027 1.4e-12 77.0 43 79.1
Sabra12G0052700 Salix brachista HOM05D007939 ORTHO05D010027 1.4e-12 77.0 45 77.8
Haze_07419 Corylus avellana HOM05D007939 ORTHO05D010027 2.3e-12 76.3 42 83.3
DCAR_021553 Daucus carota HOM05D007939 ORTHO05D010027 3.0e-12 75.9 43 81.4
Aa31LG4G16500 Aethionema arabicum HOM05D007939 ORTHO05D010027 4.0e-12 75.5 42 81.0
MD14G1189000 Malus domestica HOM05D007939 ORTHO05D010027 4.0e-12 75.5 42 78.6
BcaB01g00871 Brassica carinata HOM05D007939 ORTHO05D010027 5.2e-12 75.1 41 80.5
C03p72070 Brassica napus HOM05D007939 ORTHO05D010027 5.2e-12 75.1 41 80.5
BolC3t19505H Brassica oleracea HOM05D007939 ORTHO05D010027 5.2e-12 75.1 41 80.5
BraA06t25058Z Brassica rapa HOM05D007939 ORTHO05D010027 5.2e-12 75.1 41 80.5
Thhalv10010893m.g Eutrema salsugineum HOM05D007939 ORTHO05D010027 5.2e-12 75.1 41 80.5
Sabra15G0093500 Salix brachista HOM05D007939 ORTHO05D010027 5.2e-12 75.1 47 72.3
CARHR156540 Cardamine hirsuta HOM05D007939 ORTHO05D010027 6.8e-12 74.7 42 78.6
Gohir.A12G276700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 6.8e-12 74.7 42 78.6
Gohir.D12G277700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 6.8e-12 74.7 42 78.6
Gorai.008G298400 Gossypium raimondii HOM05D007939 ORTHO05D010027 6.8e-12 74.7 42 78.6
Prupe.5G181400 Prunus persica HOM05D007939 ORTHO05D010027 6.8e-12 74.7 42 76.2
BcaB02g10687 Brassica carinata HOM05D007939 ORTHO05D010027 8.9e-12 74.3 41 80.5
BcaC01g01771 Brassica carinata HOM05D007939 ORTHO05D010027 8.9e-12 74.3 40 82.5
Glyma.05G032500 Glycine max HOM05D007939 ORTHO05D010027 8.9e-12 74.3 43 79.1
HanXRQChr09g0271581 Helianthus annuus HOM05D007939 ORTHO05D010027 8.9e-12 74.3 42 83.3
Medtr4g107140 Medicago truncatula HOM05D007939 ORTHO05D010027 8.9e-12 74.3 64 59.4
SalBow3G2524 Salvia bowleyana HOM05D007939 ORTHO05D010027 1.2e-11 73.9 43 72.1
Lj4g0008013 Lotus japonicus HOM05D007939 ORTHO05D010027 1.5e-11 73.6 43 76.7
Sp5g14120 Schrenkiella parvula HOM05D007939 ORTHO05D010027 2.0e-11 73.2 41 78.0
Lalb_Chr13g0298021 Lupinus albus HOM05D007939 ORTHO05D010027 2.6e-11 72.8 43 76.7
RcHm_v2.0_Chr7g0179931 Rosa chinensis HOM05D007939 ORTHO05D010027 2.6e-11 72.8 41 78.0
Lj9A455T57 Lonicera japonica HOM05D007939 ORTHO05D010027 3.4e-11 72.4 43 76.7
Nitab4.5_0002875g0050 Nicotiana tabacum HOM05D007939 ORTHO05D010027 3.4e-11 72.4 51 62.7
Solyc03g113670.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 3.4e-11 72.4 42 73.8
AL5G27140 Arabidopsis lyrata HOM05D007939 ORTHO05D010027 4.4e-11 72.0 41 75.6
Phvul.003G196000 Phaseolus vulgaris HOM05D007939 ORTHO05D010027 5.7e-11 71.6 45 73.3
BolC3t18968H Brassica oleracea HOM05D007939 ORTHO05D010027 7.5e-11 71.2 44 75.0
Zm00001eb302590 Zea mays HOM05D007939 ORTHO05D010027 7.5e-11 71.2 41 80.5
C03p66950 Brassica napus HOM05D007939 ORTHO05D010027 9.8e-11 70.9 40 80.0
CAN.G853.35 Capsicum annuum HOM05D007939 ORTHO05D010027 1.3e-10 70.5 41 75.6
Nitab4.5_0000642g0220 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.3e-10 70.5 40 77.5
PSO591G0029 Papaver somniferum HOM05D007939 ORTHO05D010027 1.7e-10 70.1 42 78.6
Solyc06g071260.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 1.7e-10 70.1 44 75.0
PGSC0003DMG400033058 Solanum tuberosum HOM05D007939 ORTHO05D010027 1.7e-10 70.1 44 75.0
Peaxi162Scf00017g02235 Petunia axillaris HOM05D007939 ORTHO05D010027 3.7e-10 68.9 42 71.4
ATR0712G037 Amborella trichopoda HOM05D007939 ORTHO05D010027 4.9e-10 68.6 40 80.0
EL10Ac5g10844 Beta vulgaris HOM05D007939 ORTHO05D010027 4.9e-10 68.6 51 60.8
CAN.G628.63 Capsicum annuum HOM05D007939 ORTHO05D010027 6.4e-10 68.2 42 78.6
Nitab4.5_0000003g0340 Nicotiana tabacum HOM05D007939 ORTHO05D010027 6.4e-10 68.2 46 71.7
Carub.0005s1396 Capsella rubella HOM05D007939 ORTHO05D010027 8.3e-10 67.8 42 71.4
EL10Ac5g10864 Beta vulgaris HOM05D007939 ORTHO05D010027 1.1e-09 67.4 41 73.2
Lsat_1_v5_gn_4_74421 Lactuca sativa HOM05D007939 ORTHO05D010027 1.1e-09 67.4 42 73.8
Atru.chr9.2381 Acer truncatum HOM05D007939 ORTHO05D010027 1.4e-09 67.0 43 69.8
Nitab4.5_0002101g0080 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.4e-09 67.0 74 51.4
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 1.4e-09 67.0 44 65.9
Os03g0824500 Oryza sativa ssp. japonica HOM05D007939 ORTHO05D010027 1.8e-09 66.6 40 77.5
EL10Ac5g11334 Beta vulgaris HOM05D007939 ORTHO05D010027 3.2e-09 65.9 57 59.6
QL10p013938 Quercus lobata HOM05D007939 ORTHO05D010027 1.6e-08 63.5 54 51.9
Zm00001eb151290 Zea mays HOM05D007939 ORTHO05D010027 2.7e-08 62.8 39 74.4
Zm00001eb123900 Zea mays HOM05D007939 ORTHO05D010027 4.6e-08 62.0 39 71.8
Peaxi162Scf00689g00418 Petunia axillaris HOM05D007939 ORTHO05D010027 5.6e-06 55.1 40 67.5


User provided reference genes

Program Settings