Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 2.5e-80 302.4 191 100.0
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 1.3e-49 200.3 191 68.6
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 5.1e-49 198.4 160 78.1
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 1.9e-48 196.4 193 68.4
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.5e-48 196.1 191 68.1
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 3.3e-48 195.7 166 77.1
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 4.3e-48 195.3 192 68.2
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 4.3e-48 195.3 192 68.2
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 5.7e-48 194.9 156 79.5
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 1.6e-47 193.4 156 78.8
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 2.1e-47 193.0 198 70.7
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 8.2e-47 191.0 170 73.5
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 8.2e-47 191.0 194 66.0
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 1.1e-46 190.7 191 67.5
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 3.1e-46 189.1 177 71.2
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 3.1e-46 189.1 176 68.8
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 5.3e-46 188.3 195 66.7
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 6.9e-46 188.0 168 73.2
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 9.0e-46 187.6 194 66.5
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 1.2e-45 187.2 193 70.5
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 2.6e-45 186.0 171 69.6
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 7.6e-45 184.5 170 72.9
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 1.0e-44 184.1 179 67.6
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.0e-44 184.1 173 69.9
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.0e-44 184.1 173 69.9
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 1.0e-44 184.1 173 69.4
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 1.3e-44 183.7 179 67.6
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.3e-44 183.7 173 69.9
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 1.7e-44 183.3 154 76.6
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 2.2e-44 183.0 179 67.6
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 2.2e-44 183.0 191 65.4
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 2.2e-44 183.0 156 76.9
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 2.2e-44 183.0 156 76.9
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.9e-44 182.6 173 69.4
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 2.9e-44 182.6 191 64.9
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 3.8e-44 182.2 156 76.9
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 1.1e-43 180.6 176 68.8
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 1.1e-43 180.6 179 68.2
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 1.9e-43 179.9 191 66.0
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 2.5e-43 179.5 199 63.8
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 3.2e-43 179.1 177 67.2
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 3.2e-43 179.1 179 65.9
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 3.2e-43 179.1 193 66.8
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 4.2e-43 178.7 191 65.4
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 4.2e-43 178.7 170 71.2
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 4.2e-43 178.7 198 64.6
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 5.5e-43 178.3 155 74.8
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 7.2e-43 177.9 165 70.9
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 9.3e-43 177.6 196 63.8
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 1.2e-42 177.2 177 67.8
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 2.1e-42 176.4 162 70.4
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 2.7e-42 176.0 158 72.8
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 2.7e-42 176.0 155 72.9
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 3.6e-42 175.6 171 70.8
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 4.6e-42 175.3 182 65.4
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 6.1e-42 174.9 179 64.8
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 6.1e-42 174.9 195 63.1
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 6.1e-42 174.9 179 64.8
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 6.1e-42 174.9 192 63.0
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 6.1e-42 174.9 165 67.9
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 6.1e-42 174.9 188 63.8
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 6.1e-42 174.9 158 72.2
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 6.1e-42 174.9 167 71.3
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 7.9e-42 174.5 156 72.4
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 7.9e-42 174.5 156 72.4
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 7.9e-42 174.5 194 62.9
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 7.9e-42 174.5 195 62.6
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 7.9e-42 174.5 155 72.9
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 7.9e-42 174.5 154 74.0
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 1.0e-41 174.1 177 65.5
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.0e-41 174.1 190 64.2
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 1.8e-41 173.3 195 62.6
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 2.3e-41 172.9 179 63.7
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 3.0e-41 172.6 149 75.2
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 3.9e-41 172.2 165 70.3
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 6.7e-41 171.4 158 71.5
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 6.7e-41 171.4 170 68.2
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 8.7e-41 171.0 183 65.6
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 8.7e-41 171.0 197 61.4
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 8.7e-41 171.0 177 66.1
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 8.7e-41 171.0 156 71.8
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 1.5e-40 170.2 169 68.0
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.9e-40 169.9 152 72.4
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 1.9e-40 169.9 170 68.8
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 2.5e-40 169.5 150 73.3
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 5.7e-40 168.3 156 69.9
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 5.7e-40 168.3 156 69.9
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 1.6e-39 166.8 155 71.6
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 1.6e-39 166.8 149 71.8
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 2.2e-39 166.4 188 61.7
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 2.2e-39 166.4 154 73.4
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 2.8e-39 166.0 146 75.3
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 1.1e-38 164.1 179 62.0
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 1.8e-38 163.3 148 71.6
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 1.8e-38 163.3 191 59.7
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 2.4e-38 162.9 169 66.9
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 2.4e-38 162.9 155 72.9
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 4.1e-38 162.2 155 69.7
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 9.1e-38 161.0 170 66.5
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 3.4e-37 159.1 197 58.4
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 5.9e-37 158.3 156 68.6
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 5.0e-36 155.2 179 60.3
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 3.6e-34 149.1 191 57.1
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 6.1e-34 148.3 170 67.1
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 1.4e-33 147.1 133 73.7
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 1.1e-32 144.1 178 56.7
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.1e-30 137.5 173 60.7
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.7e-26 122.9 152 58.6
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 8.8e-25 117.9 104 61.5
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 8.8e-25 117.9 123 62.6
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 6.3e-23 111.7 153 55.6
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 3.1e-22 109.4 166 51.8
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 2.6e-21 106.3 146 56.8
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 5.9e-21 105.1 153 56.2
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 5.2e-17 92.0 103 67.0
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 2.0e-16 90.1 76 59.2
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 3.3e-16 89.4 140 52.9
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 2.2e-15 86.7 110 51.8
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 1.3e-12 77.4 155 44.5
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 4.7e-10 68.9 112 49.1
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 3.4e-08 62.8 154 47.4


User provided reference genes

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