Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 2.6e-75 285.4 158 100.0
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 3.3e-25 119.0 139 58.3
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 1.7e-21 106.7 122 58.2
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 2.7e-19 99.4 120 55.0
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 7.8e-19 97.8 140 50.0
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 8.6e-18 94.4 95 62.1
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 4.3e-17 92.0 78 65.4
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 4.3e-17 92.0 133 51.1
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 4.3e-17 92.0 78 65.4
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 5.6e-17 91.7 158 46.2
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 7.3e-17 91.3 147 48.3
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 9.5e-17 90.9 135 48.9
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 1.2e-16 90.5 135 48.9
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 2.1e-16 89.7 135 49.6
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 2.8e-16 89.4 136 48.5
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 2.8e-16 89.4 139 48.9
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 3.6e-16 89.0 121 50.4
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 3.6e-16 89.0 144 47.2
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 4.7e-16 88.6 147 48.3
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 6.2e-16 88.2 77 64.9
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 8.1e-16 87.8 138 46.4
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 1.1e-15 87.4 146 43.8
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 1.4e-15 87.0 133 47.4
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 1.8e-15 86.7 153 41.2
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 2.3e-15 86.3 77 62.3
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 3.1e-15 85.9 77 63.6
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 4.0e-15 85.5 135 48.1
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 4.0e-15 85.5 136 47.1
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 4.0e-15 85.5 135 45.9
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 5.2e-15 85.1 110 50.9
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 5.2e-15 85.1 112 50.0
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 1.2e-14 84.0 77 59.7
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.2e-14 84.0 79 63.3
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.2e-14 84.0 134 46.3
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 1.5e-14 83.6 77 59.7
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.5e-14 83.6 79 62.0
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 1.5e-14 83.6 136 46.3
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 2.0e-14 83.2 143 42.7
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 2.0e-14 83.2 143 42.7
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 2.0e-14 83.2 79 62.0
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.0e-14 83.2 79 62.0
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 2.0e-14 83.2 158 41.8
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 2.6e-14 82.8 134 46.3
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 2.6e-14 82.8 89 56.2
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 3.4e-14 82.4 97 50.5
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 4.4e-14 82.0 81 60.5
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 4.4e-14 82.0 134 45.5
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 4.4e-14 82.0 134 45.5
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 4.4e-14 82.0 133 47.4
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 7.5e-14 81.3 135 43.0
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 7.5e-14 81.3 126 45.2
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 7.5e-14 81.3 137 48.9
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 9.8e-14 80.9 90 52.2
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 1.3e-13 80.5 105 49.5
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 2.9e-13 79.3 77 58.4
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 2.9e-13 79.3 89 52.8
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 4.9e-13 78.6 129 48.1
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 8.3e-13 77.8 84 52.4
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 8.3e-13 77.8 130 45.4
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 1.1e-12 77.4 107 45.8
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 1.1e-12 77.4 130 45.4
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 1.4e-12 77.0 83 53.0
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 1.9e-12 76.6 107 44.9
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 1.9e-12 76.6 107 44.9
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 1.9e-12 76.6 124 44.4
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 1.9e-12 76.6 81 55.6
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 2.4e-12 76.3 128 43.8
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 2.4e-12 76.3 111 43.2
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 3.2e-12 75.9 105 50.5
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 3.2e-12 75.9 114 48.2
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 4.1e-12 75.5 126 42.9
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 4.1e-12 75.5 126 42.9
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 4.1e-12 75.5 126 42.9
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 5.4e-12 75.1 120 44.2
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 9.2e-12 74.3 139 43.2
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 2.1e-11 73.2 131 41.2
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 2.7e-11 72.8 155 38.1
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 7.8e-11 71.2 119 43.7
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 2.3e-10 69.7 65 53.8
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 5.1e-10 68.6 99 47.5
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 6.6e-10 68.2 109 43.1
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 8.6e-10 67.8 84 50.0
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 1.1e-09 67.4 65 55.4
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 1.9e-09 66.6 75 49.3
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 4.3e-09 65.5 136 39.7
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 9.5e-09 64.3 64 54.7
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 2.1e-08 63.2 130 40.8
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 8.1e-08 61.2 74 48.6
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 8.1e-08 61.2 74 47.3
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 4.0e-07 58.9 197 34.0
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 5.2e-07 58.5 115 48.7
DCAR_012259 Daucus carota HOM05D007375 ORTHO05D009293 7.6e-06 54.7 98 43.9
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 7.6e-06 54.7 27 85.2


User provided reference genes

Program Settings