Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 8.3e-207 723.4 346 100.0
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 1.8e-39 167.5 384 33.9
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 6.7e-39 165.6 381 34.9
SGA_v2.0_scaffold100G29621 Striga asiatica HOM05D012911 ORTHO05D010595 7.4e-38 162.2 373 34.3
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 1.5e-30 137.9 232 38.8
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 1.9e-30 137.5 230 40.0
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 4.3e-30 136.3 225 40.0
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 4.0e-28 129.8 379 31.7
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 1.0e-26 125.2 220 37.7
SGA_v2.0_scaffold40G15666 Striga asiatica HOM05D011185 ORTHO05D010595 1.7e-26 124.4 318 32.7
SGA_v2.0_scaffold366G50043 Striga asiatica HOM05D011185 ORTHO05D010595 4.9e-26 122.9 354 31.9
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 7.9e-24 115.5 212 38.7
SGA_v2.0_scaffold181G39784 Striga asiatica HOM05D017978 ORTHO05D010595 2.5e-22 110.5 218 34.9
SGA_v2.0_scaffold117G32318 Striga asiatica HOM05D011185 ORTHO05D010595 5.7e-22 109.4 221 35.3
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 1.3e-21 108.2 234 34.6
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 8.2e-21 105.5 238 35.7
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 1.4e-20 104.8 229 34.9
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 6.9e-20 102.4 329 29.2
SGA_v2.0_scaffold90G27929 Striga asiatica HOM05D012724 ORTHO05D010595 6.9e-20 102.4 231 33.8
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 9.0e-20 102.1 220 33.2
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 2.6e-19 100.5 228 35.1
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 3.4e-19 100.1 227 33.0
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 4.5e-19 99.8 225 34.2
SGA_v2.0_scaffold84G26560 Striga asiatica HOM05D012911 ORTHO05D010595 4.5e-19 99.8 211 35.5
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 1.3e-18 98.2 228 34.6
SGA_v2.0_scaffold8G04360 Striga asiatica HOM05D011185 ORTHO05D010595 2.2e-18 97.4 263 30.8
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 3.8e-18 96.7 235 34.0
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 3.8e-18 96.7 265 30.6
Gorai.011G276900 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.5e-17 94.0 258 32.2
SGA_v2.0_scaffold90G27918 Striga asiatica HOM05D012724 ORTHO05D010595 7.2e-17 92.4 198 35.4
Gorai.011G276500 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.2e-16 91.7 195 35.4
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 1.2e-16 91.7 246 31.3
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 1.6e-16 91.3 199 32.7
Gohir.D10G241100 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.6e-16 89.7 257 31.5
Gohir.D10G241600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.9e-16 89.0 257 30.7
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 1.0e-15 88.6 251 31.5
Gohir.D10G241008 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.8e-15 87.8 257 31.9
Gorai.011G276100 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.8e-15 87.8 257 31.1
Gohir.D10G240616 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.0e-15 87.0 192 34.9
Gohir.D10G241300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.0e-15 87.0 192 34.9
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.0e-15 87.0 188 34.0
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.9e-15 86.7 188 34.6
Gohir.D10G240516 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.9e-15 86.7 257 31.1
Gorai.011G281100 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.9e-15 86.7 257 30.7
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.9e-15 86.7 226 31.0
SGA_v2.0_scaffold152G36797 Striga asiatica HOM05D011185 ORTHO05D010595 8.8e-15 85.5 325 27.4
SGA_v2.0_scaffold181G39793 Striga asiatica HOM05D017978 ORTHO05D010595 8.8e-15 85.5 232 31.9
SGA_v2.0_scaffold20G09149 Striga asiatica HOM05D011185 ORTHO05D010595 8.8e-15 85.5 238 31.1
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.3e-14 83.6 179 35.8
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.8e-13 80.5 269 31.6
Gorai.011G276600 Gossypium raimondii HOM05D000007 ORTHO05D000039 4.8e-13 79.7 234 29.9
Gohir.D10G241400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.4e-12 78.2 234 29.9
Gohir.D10G240608 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.8e-12 77.8 208 31.2
SGA_v2.0_scaffold223G42883 Striga asiatica HOM05D000002 ORTHO05D000001 5.3e-12 76.3 196 30.1
TWI59G1353 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 6.9e-12 75.9 236 30.9
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 2.0e-11 74.3 223 27.8
Carub.0003s0567 Capsella rubella HOM05D000007 ORTHO05D000017 5.9e-11 72.8 230 30.0
SGA_v2.0_scaffold181G39794 Striga asiatica HOM05D017978 ORTHO05D010595 1.0e-10 72.0 216 31.9
AT3G06240 Arabidopsis thaliana HOM05D000007 ORTHO05D000017 2.2e-10 70.9 230 27.8
FvH4_6g06831 Fragaria vesca HOM05D000007 ORTHO05D000039 2.9e-10 70.5 259 26.6
Thhalv10020779m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 3.8e-10 70.1 238 27.7
SGA_v2.0_scaffold7G03932 Striga asiatica HOM05D000002 ORTHO05D010595 6.5e-10 69.3 129 36.4
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 8.5e-10 68.9 283 27.9
SGA_v2.0_scaffold186G40188 Striga asiatica HOM05D000007 ORTHO05D010595 1.4e-09 68.2 231 30.7
FAN14G0731 Fragaria x ananassa HOM05D002144 ORTHO05D002170 3.2e-09 67.0 257 26.8
SalBow2G2011 Salvia bowleyana HOM05D011515 ORTHO05D005165 3.2e-09 67.0 224 27.7
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 4.2e-09 66.6 228 27.2
SalBow1G4017 Salvia bowleyana HOM05D046612 ORTHO05D037496 1.2e-08 65.1 184 28.3
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.7e-08 63.9 244 26.2
CANSAT64G2524 Cannabis sativa HOM05D000007 ORTHO05D000039 3.6e-08 63.5 237 27.0
DCAR_019197 Daucus carota HOM05D000007 ORTHO05D000039 3.6e-08 63.5 237 26.6
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 3.6e-08 63.5 272 27.6
Aa31LG5G16750 Aethionema arabicum HOM05D000007 ORTHO05D000017 4.7e-08 63.2 229 27.1
SGA_v2.0_scaffold90G27931 Striga asiatica HOM05D012724 ORTHO05D010595 4.7e-08 63.2 85 43.5
Cfa000501 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.0e-07 62.0 227 27.8
SGA_v2.0_scaffold7G03749 Striga asiatica HOM05D012724 ORTHO05D010595 2.3e-07 60.8 80 42.5
PSO675G0641 Papaver somniferum HOM05D000007 ORTHO05D000676 3.0e-07 60.5 210 25.7
SalBow1G7714 Salvia bowleyana HOM05D012950 ORTHO05D005165 3.0e-07 60.5 169 30.2
SalBow6G4842 Salvia bowleyana HOM05D012950 ORTHO05D000017 3.0e-07 60.5 204 27.0
Haze_02829 Corylus avellana HOM05D000007 ORTHO05D000039 3.9e-07 60.1 198 27.8
SGA_v2.0_scaffold2492G54133 Striga asiatica HOM05D000007 ORTHO05D000039 3.9e-07 60.1 231 30.3
Cfa000495 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.1e-07 59.7 230 27.4
AUR62015056 Chenopodium quinoa HOM05D000007 ORTHO05D000039 2.6e-06 57.4 184 31.0
COL.COLO4_11672 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.6e-06 57.4 220 29.1
Haze_02828 Corylus avellana HOM05D000007 ORTHO05D000039 3.3e-06 57.0 160 30.0
Potri.006G170300 Populus trichocarpa HOM05D000007 ORTHO05D000039 3.3e-06 57.0 223 24.2
SalBow6G2994 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.4e-06 56.6 202 27.7
vmacro00488 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 4.4e-06 56.6 191 27.7
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.7e-06 55.5 144 31.9
SalBow1G0945 Salvia bowleyana HOM05D046612 ORTHO05D037496 9.7e-06 55.5 127 31.5


User provided reference genes

Program Settings