Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 2.6e-104 382.1 198 100.0
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 2.8e-66 255.8 194 74.7
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 3.7e-66 255.4 197 73.1
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 5.3e-65 251.5 191 73.8
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 1.5e-64 250.0 192 75.5
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 2.0e-64 249.6 201 72.1
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 1.7e-63 246.5 199 72.9
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 8.4e-63 244.2 194 72.2
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 5.5e-62 241.5 196 70.9
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.5e-62 241.5 196 70.9
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 2.7e-61 239.2 198 69.7
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 2.7e-61 239.2 199 68.3
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 6.0e-61 238.0 203 68.5
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 7.9e-61 237.7 203 70.4
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 7.9e-61 237.7 203 70.4
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.0e-60 237.3 196 69.9
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.3e-60 236.9 202 68.3
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 1.3e-60 236.9 191 71.2
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.0e-60 235.7 196 70.9
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 3.9e-60 235.3 203 67.0
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 6.7e-60 234.6 195 68.7
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 8.7e-60 234.2 196 69.4
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 4.3e-59 231.9 186 71.0
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 4.3e-59 231.9 200 71.0
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 5.7e-59 231.5 160 79.4
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 7.4e-59 231.1 194 70.6
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 7.4e-59 231.1 196 69.9
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 7.4e-59 231.1 196 68.9
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 9.6e-59 230.7 148 83.8
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 1.6e-58 229.9 156 80.8
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 1.6e-58 229.9 164 77.4
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 2.1e-58 229.6 153 82.4
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 3.7e-58 228.8 171 71.3
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 3.7e-58 228.8 196 69.9
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 6.3e-58 228.0 153 81.7
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 6.3e-58 228.0 195 68.7
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 1.1e-57 227.3 199 64.8
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 1.1e-57 227.3 196 69.9
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 1.4e-57 226.9 188 69.7
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 1.4e-57 226.9 194 69.1
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 1.4e-57 226.9 192 67.7
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 1.8e-57 226.5 159 78.0
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 3.1e-57 225.7 198 64.6
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 3.1e-57 225.7 182 70.3
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 3.1e-57 225.7 200 66.5
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 4.1e-57 225.3 205 65.4
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 4.1e-57 225.3 194 68.6
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 4.1e-57 225.3 151 80.1
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 6.9e-57 224.6 159 76.7
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 9.0e-57 224.2 198 64.1
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 9.0e-57 224.2 198 64.1
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 9.0e-57 224.2 170 70.0
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 9.0e-57 224.2 193 68.4
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 1.2e-56 223.8 159 76.7
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 1.5e-56 223.4 197 64.5
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 2.0e-56 223.0 192 67.2
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 2.6e-56 222.6 192 66.7
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 4.5e-56 221.9 195 65.1
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 7.6e-56 221.1 158 79.1
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 7.6e-56 221.1 158 76.6
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 7.6e-56 221.1 153 77.8
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 1.3e-55 220.3 159 76.7
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 1.7e-55 219.9 158 78.5
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 1.7e-55 219.9 154 74.7
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.7e-55 219.9 194 67.0
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.2e-55 219.5 161 73.9
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.2e-55 219.5 161 73.9
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 2.9e-55 219.2 168 71.4
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 2.9e-55 219.2 146 81.5
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 2.9e-55 219.2 152 77.6
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 5.0e-55 218.4 161 73.9
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 5.0e-55 218.4 184 67.9
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 5.0e-55 218.4 188 67.0
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 8.4e-55 217.6 152 77.6
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 1.1e-54 217.2 201 64.2
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 1.9e-54 216.5 151 77.5
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 1.9e-54 216.5 154 77.9
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 1.9e-54 216.5 155 76.8
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 2.5e-54 216.1 149 78.5
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 4.2e-54 215.3 203 63.1
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 4.2e-54 215.3 203 63.1
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 4.2e-54 215.3 163 71.2
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 4.2e-54 215.3 204 63.7
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 5.5e-54 214.9 179 67.0
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 5.5e-54 214.9 135 82.2
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 7.2e-54 214.5 196 65.8
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 1.2e-53 213.8 209 60.3
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 1.6e-53 213.4 188 63.8
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.1e-53 213.0 147 81.0
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.1e-53 213.0 147 81.0
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 2.1e-53 213.0 199 63.3
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 3.5e-53 212.2 206 62.1
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 3.5e-53 212.2 147 76.2
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 4.6e-53 211.8 151 74.8
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 1.0e-52 210.7 196 64.8
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 5.1e-52 208.4 142 79.6
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 8.7e-52 207.6 205 61.5
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 8.7e-52 207.6 144 78.5
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 6.3e-50 201.4 158 69.6
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 9.0e-49 197.6 142 74.6
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 1.0e-47 194.1 151 70.2
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 2.2e-47 193.0 196 62.8
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 1.4e-46 190.3 134 71.6
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 2.5e-46 189.5 114 86.8
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 5.5e-46 188.3 154 65.6
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 7.2e-46 188.0 138 71.7
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 7.9e-45 184.5 171 56.7
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 5.1e-44 181.8 140 66.4
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 2.5e-43 179.5 124 75.0
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 4.3e-43 178.7 116 83.6
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.4e-41 173.7 114 78.9
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 1.0e-39 167.5 116 77.6
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 6.5e-39 164.9 170 53.5
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 1.2e-37 160.6 108 79.6
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 9.7e-35 151.0 156 58.3
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.8e-34 149.4 125 60.8
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 2.6e-32 142.9 135 58.5
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 1.0e-31 141.0 147 53.1
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 2.2e-31 139.8 160 52.5
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.5e-30 137.1 92 82.6
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.5e-30 137.1 87 85.1
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 5.5e-30 135.2 87 83.9
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.7e-26 123.6 136 58.1
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 2.7e-24 116.3 86 73.3
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 2.9e-23 112.8 90 70.0
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 4.0e-20 102.4 78 71.8
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 1.5e-19 100.5 121 50.4
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.4e-17 94.0 136 43.4
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 2.3e-07 60.1 112 34.8


User provided reference genes

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