Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03972 Striga asiatica HOM05D007576 ORTHO05D009576 0.0e+00 1438.7 743 100.0
MSTRG.15916 Avicennia marina HOM05D007576 ORTHO05D009576 7.5e-213 744.6 755 57.4
SalBow8G3709 Salvia bowleyana HOM05D007576 ORTHO05D009576 1.2e-199 700.7 755 55.9
Migut.M01192 Erythranthe guttata HOM05D007576 ORTHO05D009576 2.2e-188 663.3 744 54.6
CSS0005805 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 2.4e-155 553.5 757 47.8
Dinv07540 Davidia involucrata HOM05D007576 ORTHO05D009576 1.1e-150 538.1 750 45.6
Nitab4.5_0001357g0010 Nicotiana tabacum HOM05D007576 ORTHO05D009576 1.3e-148 531.2 762 45.3
Nitab4.5_0009493g0040 Nicotiana tabacum HOM05D007576 ORTHO05D009576 1.4e-147 527.7 762 44.6
PGSC0003DMG400022439 Solanum tuberosum HOM05D007576 ORTHO05D009576 5.1e-145 519.2 760 44.5
Sopen02g023320 Solanum pennellii HOM05D007576 ORTHO05D009576 7.4e-144 515.4 765 44.6
Sabra11G0034500 Salix brachista HOM05D007576 ORTHO05D009576 2.4e-142 510.4 746 45.6
Potri.011G050600 Populus trichocarpa HOM05D007576 ORTHO05D009576 1.5e-141 507.7 758 44.7
CiPaw.09G057800 Carya illinoinensis HOM05D007576 ORTHO05D009576 7.6e-141 505.4 710 44.4
Thecc.06G190300 Theobroma cacao HOM05D007576 ORTHO05D009576 8.4e-140 501.9 710 45.4
RhsimUnG0044800 Rhododendron simsii HOM05D007576 ORTHO05D009576 4.2e-139 499.6 754 45.8
CAN.G1164.10 Capsicum annuum HOM05D007576 ORTHO05D009576 1.2e-138 498.0 755 44.8
Cfa000420 Carpinus fangiana HOM05D007576 ORTHO05D009576 4.6e-138 496.1 748 42.6
Lj1A1207T83 Lonicera japonica HOM05D007576 ORTHO05D009576 1.9e-136 490.7 708 45.2
QL05p039732 Quercus lobata HOM05D007576 ORTHO05D009576 7.4e-136 488.8 769 42.9
Duzib192G1068 Durio zibethinus HOM05D007576 ORTHO05D009576 3.7e-135 486.5 767 42.9
Manes.17G043700 Manihot esculenta HOM05D007576 ORTHO05D009576 1.4e-134 484.6 711 44.3
TWI38G1553 Tripterygium wilfordii HOM05D007576 ORTHO05D009576 1.2e-133 481.5 713 44.7
COL.COLO4_31497 Corchorus olitorius HOM05D007576 ORTHO05D009576 3.5e-130 469.9 782 41.7
Cpa.g.sc1598.2 Carica papaya HOM05D007576 ORTHO05D009576 4.6e-130 469.5 704 43.3
FAN25G3788 Fragaria x ananassa HOM05D007576 ORTHO05D009576 4.6e-130 469.5 762 42.5
FAN21G0504 Fragaria x ananassa HOM05D007576 ORTHO05D009576 3.0e-129 466.8 756 42.7
MD05G1314800 Malus domestica HOM05D007576 ORTHO05D009576 1.9e-128 464.2 692 45.5
FAN16G1901 Fragaria x ananassa HOM05D007576 ORTHO05D009576 9.7e-128 461.8 756 42.2
FAN11G2000 Fragaria x ananassa HOM05D007576 ORTHO05D009576 2.2e-127 460.7 754 41.5
MD10G1296200 Malus domestica HOM05D007576 ORTHO05D009576 8.2e-127 458.8 733 43.2
FvH4_3g04910 Fragaria vesca HOM05D007576 ORTHO05D009576 1.5e-125 454.5 758 41.6
Ciclev10014397m.g Citrus clementina HOM05D007576 ORTHO05D009576 3.4e-125 453.4 740 41.6
Cc02_g13130 Coffea canephora HOM05D007576 ORTHO05D009576 3.4e-125 453.4 715 42.9
Gohir.A06G126300 Gossypium hirsutum HOM05D007576 ORTHO05D009576 1.2e-122 444.9 720 41.5
Gorai.010G153000 Gossypium raimondii HOM05D007576 ORTHO05D009576 2.7e-122 443.7 721 41.6
Sc05g0007790 Simmondsia chinensis HOM05D007576 ORTHO05D009576 2.7e-122 443.7 771 41.4
RcHm_v2.0_Chr5g0008071 Rosa chinensis HOM05D007576 ORTHO05D009576 6.1e-122 442.6 758 40.5
DCAR_008044 Daucus carota HOM05D007576 ORTHO05D009576 7.9e-122 442.2 687 42.6
Gohir.D06G131100 Gossypium hirsutum HOM05D007576 ORTHO05D009576 7.9e-122 442.2 721 41.7
CsaV3_6G050020 Cucumis sativus L. HOM05D007576 ORTHO05D009576 2.3e-121 440.7 699 40.3
MELO3C007295.2 Cucumis melo HOM05D007576 ORTHO05D009576 5.1e-121 439.5 699 40.3
Phvul.003G161900 Phaseolus vulgaris HOM05D007576 ORTHO05D009576 8.7e-121 438.7 730 40.5
CANSAT35G0220 Cannabis sativa HOM05D007576 ORTHO05D009576 1.9e-120 437.6 698 43.3
Hund21235 Selenicereus undatus HOM05D007576 ORTHO05D009576 1.3e-119 434.9 748 41.6
ClCG01G022850 Citrullus lanatus HOM05D007576 ORTHO05D009576 2.4e-118 430.6 699 40.5
Glyma.05G009500 Glycine max HOM05D007576 ORTHO05D009576 9.1e-118 428.7 717 41.6
HanXRQChr16g0518181 Helianthus annuus HOM05D007576 ORTHO05D009576 2.0e-117 427.6 748 40.6
Prupe.4G044400 Prunus persica HOM05D007576 ORTHO05D009576 3.4e-117 426.8 773 40.8
Lsat_1_v5_gn_4_52541 Lactuca sativa HOM05D007576 ORTHO05D009576 4.5e-117 426.4 738 41.2
VMungo1215G0476 Vigna mungo HOM05D007576 ORTHO05D009576 2.2e-116 424.1 761 39.0
arahy.Tifrunner.gnm1.ann1.TJX0PA Arachis hypogaea HOM05D007576 ORTHO05D009576 8.5e-116 422.2 730 41.1
Sed0017500 Sechium edule HOM05D007576 ORTHO05D009576 8.5e-116 422.2 727 39.6
Glyma.17G117500 Glycine max HOM05D007576 ORTHO05D009576 1.4e-115 421.4 741 39.9
arahy.Tifrunner.gnm1.ann1.TJT9YV Arachis hypogaea HOM05D007576 ORTHO05D009576 4.2e-115 419.9 741 40.1
Eucgr.E03347 Eucalyptus grandis HOM05D007576 ORTHO05D009576 9.4e-115 418.7 764 39.0
Nn1g06600 Nelumbo nucifera HOM05D007576 ORTHO05D009576 9.4e-115 418.7 732 39.6
Lalb_Chr13g0302021 Lupinus albus HOM05D007576 ORTHO05D009576 1.2e-114 418.3 744 39.2
Medtr4g113740 Medicago truncatula HOM05D007576 ORTHO05D009576 2.1e-114 417.5 753 39.6
Psat4g041840 Pisum sativum HOM05D007576 ORTHO05D009576 3.6e-114 416.8 717 40.6
Ah.14g089350 Amaranthus hybridus HOM05D007576 ORTHO05D009576 8.8e-113 412.1 695 41.3
Peaxi162Scf00947g00422 Petunia axillaris HOM05D007576 ORTHO05D009576 8.8e-113 412.1 613 44.5
Ca_21702_v3 Cicer arietinum L. HOM05D007576 ORTHO05D009576 1.1e-112 411.8 749 40.1
PSO675G5421 Papaver somniferum HOM05D007576 ORTHO05D009576 1.1e-112 411.8 803 37.6
AUR62014798 Chenopodium quinoa HOM05D007576 ORTHO05D009576 3.1e-110 403.7 758 39.7
AUR62016989 Chenopodium quinoa HOM05D007576 ORTHO05D009576 9.1e-110 402.1 744 38.6
ECA234G2395 Erigeron canadensis HOM05D007576 ORTHO05D009576 7.7e-109 399.1 702 39.9
Lj4g0015142 Lotus japonicus HOM05D007576 ORTHO05D009576 7.7e-109 399.1 716 38.8
EL10Ac8g20358 Beta vulgaris HOM05D007576 ORTHO05D009576 2.2e-108 397.5 717 39.7
Aqoxy1G02531 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 3.2e-107 393.7 765 37.9
Aqoxy1G02534 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 3.2e-107 393.7 765 37.9
MBI18_g17005_MAGBIO Magnolia biondii HOM05D007576 ORTHO05D009576 1.5e-104 384.8 837 37.2
Haze_06496 Corylus avellana HOM05D007576 ORTHO05D009576 2.2e-100 370.9 655 39.2
PGR042G0577 Punica granatum HOM05D007576 ORTHO05D009576 3.0e-97 360.5 695 37.6
Oeu038219.1 Olea europaea HOM05D007576 ORTHO05D009576 8.8e-97 359.0 245 75.5
GSVIVG01002036001 Vitis vinifera HOM05D007576 ORTHO05D009576 3.7e-95 353.6 307 62.2
PSO541G6317 Papaver somniferum HOM05D007576 ORTHO05D009576 4.2e-91 340.1 393 51.1
CSS0010553 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 6.1e-90 336.3 716 38.7
TPR.G10703 Trifolium pratense HOM05D007576 ORTHO05D009576 4.8e-87 326.6 275 61.8
HPP92_014806 Vanilla planifolia HOM05D007576 ORTHO05D009576 7.0e-86 322.8 731 35.3
CDE01G0107 Ceratophyllum demersum HOM05D007576 ORTHO05D009576 2.0e-80 304.7 618 36.7
Zm00001eb229030 Zea mays HOM05D007576 ORTHO05D009576 4.5e-77 293.5 304 52.6
ATR0680G038 Amborella trichopoda HOM05D007576 ORTHO05D009576 5.9e-77 293.1 510 40.8
Os06g0731700 Oryza sativa ssp. japonica HOM05D007576 ORTHO05D009576 8.6e-76 289.3 346 46.8
Atru.chr10.1919 Acer truncatum HOM05D007576 ORTHO05D009576 6.8e-65 253.1 560 35.9
Ciclev10008775m.g Citrus clementina HOM05D007576 ORTHO05D009576 4.4e-64 250.4 381 45.4
Pp3c11_25570 Physcomitrium patens HOM05D007576 ORTHO05D009576 2.2e-55 221.5 284 45.4
Mapoly0181s0007 Marchantia polymorpha HOM05D007576 ORTHO05D009576 2.7e-53 214.5 250 46.4
Ciclev10009735m.g Citrus clementina HOM05D007576 ORTHO05D009576 1.1e-43 182.6 156 62.2
Duzib235G0673 Durio zibethinus HOM05D007576 ORTHO05D009576 5.6e-43 180.3 153 62.7
Solyc02g078470.4 Solanum lycopersicum HOM05D007576 ORTHO05D009576 1.7e-31 142.1 104 68.3
CBR_g49326 Chara braunii HOM05D007576 ORTHO05D000002 9.6e-27 126.3 189 38.6
Atru.chr10.1928 Acer truncatum HOM05D007576 ORTHO05D009576 1.5e-19 102.4 384 29.4
Lj2g0021670 Lotus japonicus HOM05D007576 ORTHO05D009576 4.3e-19 100.9 166 40.4
SEGI_32076 Sequoiadendron giganteum HOM05D007576 ORTHO05D009576 8.4e-15 86.7 87 50.6
ECA247G2871 Erigeron canadensis HOM05D000526 ORTHO05D000956 3.2e-14 84.7 76 59.2
Cre13.g589167 Chlamydomonas reinhardtii HOM05D007576 ORTHO05D009576 3.7e-10 71.2 256 26.2


User provided reference genes

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