Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 6.1e-132 474.2 243 100.0
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 6.1e-55 218.4 243 56.0
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 1.3e-52 210.7 232 57.8
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 3.8e-49 199.1 243 55.1
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 5.2e-46 188.7 231 53.7
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.5e-40 170.6 237 47.7
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.2e-39 167.5 245 48.2
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 5.2e-38 162.2 237 46.8
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.2e-37 161.0 264 44.3
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.2e-37 161.0 248 44.4
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 5.7e-37 158.7 263 43.3
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 9.7e-37 157.9 280 40.7
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.7e-36 157.1 223 49.8
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 6.3e-36 155.2 241 41.9
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 8.3e-36 154.8 249 42.6
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 8.3e-36 154.8 282 42.6
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.8e-35 153.7 291 40.2
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 2.4e-35 153.3 210 49.5
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 2.4e-35 153.3 255 42.0
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 3.1e-35 152.9 227 49.3
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 4.1e-35 152.5 266 42.1
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 5.3e-35 152.1 247 45.3
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 9.1e-35 151.4 234 44.9
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.5e-34 149.4 205 48.3
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.5e-34 149.4 230 43.0
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.9e-34 148.7 259 40.9
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.7e-33 147.1 245 42.4
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 2.2e-33 146.7 268 42.9
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 3.8e-33 146.0 265 41.9
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 5.0e-33 145.6 255 40.0
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 6.5e-33 145.2 260 44.2
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.5e-32 144.1 264 41.7
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.5e-32 144.1 259 41.7
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 3.2e-32 142.9 280 37.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.2e-32 142.5 259 40.5
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 7.2e-32 141.7 250 43.6
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 9.4e-32 141.4 245 42.9
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.4e-32 141.4 259 41.3
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 9.4e-32 141.4 246 41.1
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.2e-31 141.0 267 39.0
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 1.2e-31 141.0 228 46.1
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 2.7e-31 139.8 269 40.5
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.7e-31 139.8 251 40.6
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 3.6e-31 139.4 269 42.0
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 4.7e-31 139.0 269 42.0
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.4e-30 137.5 249 39.4
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 1.8e-30 137.1 228 47.8
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 4.0e-30 136.0 231 41.1
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 4.0e-30 136.0 249 44.2
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 5.2e-30 135.6 238 40.3
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 1.2e-29 134.4 252 41.3
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.5e-29 134.0 259 38.2
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.5e-29 134.0 259 38.2
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 2.6e-29 133.3 248 41.1
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 2.6e-29 133.3 246 41.1
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.4e-29 132.5 267 39.3
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 2.2e-28 130.2 246 41.1
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 2.2e-28 130.2 248 41.5
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 4.8e-28 129.0 227 44.5
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.8e-27 127.1 231 43.3
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 4.1e-27 125.9 146 50.7
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 5.4e-27 125.6 244 40.6
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 7.0e-27 125.2 222 42.3
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.7e-26 123.2 231 42.0
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.9e-26 122.1 231 42.0
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 5.9e-26 122.1 240 39.2
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.0e-25 121.3 196 42.9
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 3.8e-25 119.4 248 40.7
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 3.8e-25 119.4 204 43.1
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 8.6e-25 118.2 256 36.7
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.1e-24 117.9 296 34.5
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.5e-24 117.5 246 40.2
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 3.3e-24 116.3 255 38.0
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 3.3e-24 116.3 333 31.5
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 3.3e-24 116.3 263 39.5
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 5.5e-24 115.5 249 36.9
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 7.2e-24 115.2 235 39.6
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 7.2e-24 115.2 265 38.9
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 1.6e-23 114.0 242 40.1
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.1e-23 113.6 241 38.6
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.0e-22 111.3 289 32.9
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.4e-22 110.9 248 38.7
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.3e-22 110.2 165 44.8
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 2.3e-22 110.2 242 39.3
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 8.9e-22 108.2 244 36.5
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 8.9e-22 108.2 254 38.6
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.5e-21 107.5 244 36.1
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.6e-21 106.7 242 38.4
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 5.7e-21 105.5 254 34.3
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 7.5e-21 105.1 245 37.6
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 9.8e-21 104.8 125 47.2
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 2.8e-20 103.2 245 38.8
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 6.3e-20 102.1 245 38.8
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 3.2e-19 99.8 246 38.6
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 5.4e-19 99.0 133 42.9
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 2.0e-18 97.1 238 38.2
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 2.0e-18 97.1 254 37.4
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.7e-18 96.7 249 37.8
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 2.7e-18 96.7 240 37.5
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 2.7e-18 96.7 168 38.1
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 4.5e-18 95.9 249 33.3
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 7.8e-18 95.1 251 36.3
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 2.3e-17 93.6 85 62.4
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.9e-17 93.2 209 37.3
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.1e-16 91.3 227 41.4
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.9e-16 90.5 202 39.1
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.5e-16 90.1 227 40.5
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 7.3e-16 88.6 230 33.5
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 9.5e-16 88.2 143 40.6
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 1.6e-15 87.4 244 32.0
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.1e-15 87.0 225 37.8
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.1e-15 87.0 225 37.8
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 4.7e-15 85.9 247 33.2
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 9.8e-13 78.2 242 31.8
unitig_37.g12336 Utricularia gibba HOM05D006486 ORTHO05D007888 8.3e-12 75.1 238 33.2
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.4e-11 74.3 186 34.4
Oeu001396.1 Olea europaea HOM05D045950 ORTHO05D007888 1.0e-09 68.2 64 59.4
Oeu001394.1 Olea europaea HOM05D045950 ORTHO05D007888 1.3e-09 67.8 81 51.9
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.7e-09 67.4 206 33.0
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 2.3e-09 67.0 75 56.0
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 1.5e-08 64.3 140 38.6
Ah.14g088910 Amaranthus hybridus HOM05D000873 ORTHO05D001654 6.8e-06 55.5 115 42.6


User provided reference genes

Program Settings