Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 2.9e-105 385.2 185 100.0
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 9.6e-53 210.7 111 92.8
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 1.5e-37 160.2 124 68.5
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 8.2e-36 154.5 117 70.1
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.2e-31 140.6 111 64.9
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.4e-30 137.1 101 65.3
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.4e-30 137.1 101 65.3
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.8e-30 136.7 148 53.4
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 1.8e-30 136.7 131 57.3
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.1e-29 134.0 128 57.0
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 3.3e-29 132.5 122 60.7
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 4.4e-29 132.1 142 50.0
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 4.4e-29 132.1 142 50.0
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 4.4e-29 132.1 98 68.4
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.7e-29 131.7 86 75.6
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 7.4e-29 131.3 128 57.8
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 9.7e-29 131.0 122 59.8
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.7e-28 130.2 145 51.7
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 2.8e-28 129.4 136 51.5
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 2.8e-28 129.4 91 70.3
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 2.8e-28 129.4 134 53.7
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.8e-28 129.4 93 73.1
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 3.7e-28 129.0 118 61.9
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 3.7e-28 129.0 137 57.7
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 6.3e-28 128.3 91 71.4
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 6.3e-28 128.3 134 54.5
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 6.3e-28 128.3 89 75.3
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 6.3e-28 128.3 129 55.0
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 6.3e-28 128.3 141 52.5
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 6.3e-28 128.3 87 73.6
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.1e-27 127.5 87 74.7
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 1.1e-27 127.5 128 55.5
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 1.4e-27 127.1 85 74.1
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.4e-27 127.1 87 74.7
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.4e-27 127.1 112 60.7
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 1.4e-27 127.1 87 72.4
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 1.8e-27 126.7 84 76.2
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.8e-27 126.7 87 71.3
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 1.8e-27 126.7 85 74.1
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 1.8e-27 126.7 86 73.3
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 1.8e-27 126.7 88 72.7
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 2.4e-27 126.3 85 74.1
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 2.4e-27 126.3 126 54.0
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 2.4e-27 126.3 126 54.0
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 2.4e-27 126.3 87 73.6
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.4e-27 126.3 85 74.1
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.4e-27 126.3 85 74.1
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 2.4e-27 126.3 130 55.4
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 3.1e-27 125.9 119 59.7
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 3.1e-27 125.9 88 71.6
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 4.1e-27 125.6 103 63.1
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 4.1e-27 125.6 134 52.2
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 5.3e-27 125.2 95 68.4
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 7.0e-27 124.8 142 52.1
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 7.0e-27 124.8 85 71.8
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 7.0e-27 124.8 85 74.1
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 9.1e-27 124.4 85 74.1
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 9.1e-27 124.4 83 75.9
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 9.1e-27 124.4 83 75.9
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 1.2e-26 124.0 88 70.5
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.2e-26 124.0 88 68.2
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.2e-26 124.0 87 71.3
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 1.6e-26 123.6 101 63.4
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.6e-26 123.6 83 75.9
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 1.6e-26 123.6 85 70.6
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 2.0e-26 123.2 119 58.0
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 2.0e-26 123.2 85 71.8
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 2.0e-26 123.2 118 61.0
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 2.0e-26 123.2 86 69.8
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 2.6e-26 122.9 96 62.5
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 3.5e-26 122.5 87 70.1
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 3.5e-26 122.5 116 57.8
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 3.5e-26 122.5 128 54.7
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 4.5e-26 122.1 98 64.3
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 4.5e-26 122.1 97 66.0
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 4.5e-26 122.1 96 64.6
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 5.9e-26 121.7 112 58.9
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 5.9e-26 121.7 113 57.5
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 7.7e-26 121.3 66 83.3
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 1.0e-25 120.9 92 68.5
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.3e-25 120.6 85 71.8
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.3e-25 120.6 119 57.1
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.3e-25 120.6 77 77.9
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 1.3e-25 120.6 87 69.0
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 1.7e-25 120.2 87 67.8
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 2.9e-25 119.4 85 69.4
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 6.5e-25 118.2 61 90.2
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 8.5e-25 117.9 128 55.5
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 8.5e-25 117.9 83 69.9
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.1e-24 117.5 87 65.5
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 1.1e-24 117.5 86 67.4
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.1e-24 117.5 135 52.6
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 1.9e-24 116.7 112 56.2
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.9e-24 116.7 77 72.7
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.9e-24 116.7 77 72.7
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.9e-24 116.7 77 72.7
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.9e-24 116.7 77 72.7
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 2.5e-24 116.3 112 56.2
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 2.5e-24 116.3 87 66.7
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 2.5e-24 116.3 75 73.3
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 7.2e-24 114.8 83 68.7
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 1.2e-23 114.0 110 55.5
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 2.1e-23 113.2 120 50.8
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 5.2e-22 108.6 89 60.7
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 2.0e-21 106.7 81 65.4
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 4.4e-21 105.5 60 75.0
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.7e-20 103.6 77 63.6
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 3.7e-20 102.4 58 72.4
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.5e-18 95.5 47 91.5
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.3e-12 77.4 120 38.3
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.6e-10 70.5 60 51.7
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 2.9e-09 66.2 95 36.8
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 7.2e-08 61.6 67 49.3


User provided reference genes

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