Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 0.0e+00 1218.4 613 100.0
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 1.7e-133 480.7 696 47.3
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 9.4e-129 464.9 664 48.2
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.2e-115 421.4 695 43.3
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 3.2e-113 413.3 696 43.5
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 5.5e-113 412.5 698 43.1
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 7.2e-113 412.1 697 42.5
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 6.1e-112 409.1 696 42.4
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 1.5e-110 404.4 699 42.8
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 2.0e-107 394.0 694 42.9
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 6.6e-106 389.0 446 53.6
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 1.8e-103 380.9 701 39.8
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 3.2e-100 370.2 676 43.0
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 5.9e-99 365.9 710 39.9
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 1.3e-98 364.8 652 42.2
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.3e-98 364.8 688 40.8
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 1.8e-95 354.4 693 40.8
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 6.8e-95 352.4 700 39.0
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 6.8e-95 352.4 691 40.7
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 6.8e-95 352.4 691 40.7
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 2.6e-94 350.5 694 40.1
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 7.5e-94 349.0 697 38.6
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 2.9e-93 347.1 668 40.3
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 2.7e-91 340.5 697 38.9
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 7.8e-91 339.0 690 39.6
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 7.8e-91 339.0 690 40.0
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 1.0e-90 338.6 657 41.4
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 1.0e-90 338.6 662 41.4
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 1.3e-90 338.2 693 39.4
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 1.7e-90 337.8 695 38.0
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 5.0e-90 336.3 658 39.4
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 1.1e-89 335.1 698 39.7
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 4.7e-88 329.7 700 38.7
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 1.4e-87 328.2 692 40.9
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.4e-87 328.2 692 38.0
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 4.4e-86 323.2 675 37.2
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 7.5e-86 322.4 693 38.8
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 9.8e-86 322.0 635 40.5
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 1.7e-85 321.2 729 37.4
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 8.3e-85 318.9 674 36.8
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 1.9e-84 317.8 638 38.6
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.6e-83 314.7 693 38.4
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.0e-82 312.0 702 37.7
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 2.3e-82 310.8 693 38.0
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 2.3e-82 310.8 721 35.5
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.3e-82 310.8 693 37.4
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 8.6e-82 308.9 686 36.9
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 1.5e-81 308.1 692 35.7
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.1e-79 302.0 699 37.3
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 5.2e-79 299.7 704 36.5
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 8.9e-79 298.9 698 35.7
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 4.4e-78 296.6 698 37.0
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 5.8e-78 296.2 555 39.5
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 7.6e-78 295.8 681 37.2
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.7e-77 294.7 708 35.5
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 4.1e-76 290.0 674 37.4
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 7.1e-76 289.3 696 36.6
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 7.1e-76 289.3 678 35.8
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 7.1e-76 289.3 691 36.3
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 2.7e-75 287.3 703 35.7
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 4.6e-75 286.6 682 36.8
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 4.6e-75 286.6 688 36.3
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 7.8e-75 285.8 694 36.5
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.9e-73 281.2 411 44.5
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 2.5e-73 280.8 683 35.7
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 6.2e-72 276.2 666 37.8
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 6.2e-72 276.2 686 35.9
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 8.1e-72 275.8 686 35.6
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 1.1e-71 275.4 697 36.6
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.4e-71 274.2 670 36.6
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 8.9e-71 272.3 688 35.5
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 2.2e-69 267.7 427 43.1
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 4.9e-69 266.5 690 34.6
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 1.1e-68 265.4 686 36.6
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.9e-68 264.6 659 36.1
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 3.5e-67 260.4 698 35.1
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 3.5e-67 260.4 693 35.5
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 4.6e-67 260.0 686 36.3
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 6.0e-67 259.6 445 42.2
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 6.0e-67 259.6 684 37.7
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 2.3e-66 257.7 694 34.4
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.1e-65 255.4 691 35.3
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 7.3e-65 252.7 694 34.6
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 3.6e-64 250.4 683 34.0
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 4.8e-64 250.0 738 35.4
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 3.1e-63 247.3 642 35.7
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 3.2e-60 237.3 455 40.0
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 3.2e-60 237.3 435 40.0
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 3.5e-59 233.8 670 34.6
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 4.6e-59 233.4 680 34.3
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 3.0e-58 230.7 573 36.0
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 5.1e-58 229.9 674 33.1
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 3.3e-57 227.3 663 34.5
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 1.3e-56 225.3 452 37.6
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 6.9e-55 219.5 664 33.1
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.2e-53 214.5 635 32.4
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 3.8e-53 213.8 659 33.1
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 5.5e-52 209.9 440 37.5
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 7.1e-52 209.5 645 33.5
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 2.1e-51 208.0 665 34.1
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.0e-50 205.7 679 32.3
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.3e-50 205.3 554 34.3
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 6.7e-50 203.0 736 30.8
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 4.3e-49 200.3 666 33.6
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 5.6e-49 199.9 672 31.7
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 7.4e-49 199.5 670 31.9
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 2.8e-48 197.6 678 30.4
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 8.1e-48 196.1 661 32.2
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 1.8e-47 194.9 446 39.0
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 3.4e-46 190.7 672 31.8
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 1.3e-45 188.7 658 31.0
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 3.8e-45 187.2 664 31.9
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 8.4e-45 186.0 696 32.8
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 1.6e-43 181.8 668 31.0
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 7.9e-43 179.5 665 31.0
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 5.1e-42 176.8 414 34.3
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 7.4e-41 172.9 672 30.4
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 2.1e-40 171.4 652 30.4
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 2.4e-39 167.9 528 32.2
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 5.3e-39 166.8 624 30.0
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 3.6e-35 154.1 665 30.1
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.0e-34 152.5 158 53.2
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 3.3e-33 147.5 238 43.7
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 3.7e-32 144.1 663 30.3
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 1.1e-31 142.5 120 59.2
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 2.2e-29 134.8 786 29.6
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 2.5e-28 131.3 407 33.9
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 9.1e-23 112.8 179 46.9
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 6.5e-21 106.7 356 34.3
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 1.4e-15 89.0 243 35.0
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 3.1e-15 87.8 107 49.5
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 9.1e-15 86.3 162 40.7
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 2.9e-13 81.3 262 31.7
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 4.0e-10 70.9 111 45.0
CAN.G466.8 Capsicum annuum HOM05D005409 ORTHO05D006456 1.7e-08 65.5 56 55.4
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 2.7e-06 58.2 179 31.3
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 4.5e-06 57.4 77 50.6
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 7.7e-06 56.6 213 31.5


User provided reference genes

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