Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.0e-165 586.6 287 100.0
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 8.0e-147 523.9 287 86.8
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 1.7e-144 516.2 287 86.4
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 5.9e-142 507.7 287 83.3
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.0e-141 506.9 287 85.0
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.3e-141 505.8 287 82.9
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 9.5e-140 500.4 287 81.2
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 3.6e-139 498.4 285 82.1
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 2.3e-138 495.7 287 82.2
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 5.7e-137 491.1 287 77.7
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 3.7e-136 488.4 285 78.9
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 3.7e-136 488.4 287 77.4
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 4.9e-136 488.0 282 81.6
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 8.3e-136 487.3 294 77.9
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 5.4e-135 484.6 284 78.5
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 5.4e-135 484.6 286 77.3
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 7.0e-135 484.2 284 79.6
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 7.0e-135 484.2 309 76.1
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 7.0e-135 484.2 286 77.3
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 9.2e-135 483.8 287 79.1
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 1.2e-134 483.4 284 78.5
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.0e-134 482.6 287 78.0
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.7e-134 482.3 284 78.2
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 5.9e-134 481.1 284 78.2
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.0e-133 480.3 284 77.8
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.3e-133 479.9 287 78.4
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.3e-133 479.9 287 78.0
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 5.0e-133 478.0 286 78.3
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 6.6e-133 477.6 287 77.4
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.1e-132 476.9 287 76.7
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.5e-132 476.5 286 78.0
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 3.3e-132 475.3 298 74.5
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 5.6e-132 474.6 286 77.6
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 5.6e-132 474.6 286 78.0
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 9.5e-132 473.8 287 77.4
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 9.5e-132 473.8 287 77.4
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 9.5e-132 473.8 287 77.7
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.2e-131 473.4 288 76.4
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.6e-131 473.0 287 74.2
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 6.1e-131 471.1 284 75.7
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 6.1e-131 471.1 284 76.1
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 1.0e-130 470.3 287 77.0
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 2.3e-130 469.2 287 74.2
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 3.0e-130 468.8 288 75.3
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 4.0e-130 468.4 285 76.5
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 8.9e-130 467.2 284 76.8
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 1.2e-129 466.8 285 76.8
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 1.2e-129 466.8 271 80.1
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 1.5e-129 466.5 287 76.3
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 2.0e-129 466.1 284 76.8
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 5.8e-129 464.5 285 75.8
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 9.8e-129 463.8 286 76.2
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 9.8e-129 463.8 285 77.2
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 2.9e-128 462.2 285 76.1
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 2.9e-128 462.2 287 73.2
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 2.9e-128 462.2 287 73.2
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 2.9e-128 462.2 285 75.8
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 6.4e-128 461.1 278 75.9
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 8.3e-128 460.7 287 72.8
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 8.3e-128 460.7 283 73.9
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 1.1e-127 460.3 285 76.1
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.1e-127 460.3 287 75.3
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.4e-127 459.9 287 73.2
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.9e-127 459.5 282 75.2
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 3.2e-127 458.8 287 72.5
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.0e-125 453.8 287 72.8
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 3.9e-125 451.8 286 73.4
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.9e-125 451.8 285 74.0
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 6.6e-125 451.1 283 73.5
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 3.3e-124 448.7 288 72.2
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 4.3e-124 448.4 287 72.1
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 9.5e-124 447.2 290 71.0
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.6e-123 446.4 286 70.3
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 2.1e-123 446.0 286 72.0
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 8.0e-123 444.1 286 73.1
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 1.4e-122 443.4 281 73.0
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 4.0e-122 441.8 269 75.8
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 8.9e-122 440.7 286 69.6
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 8.9e-122 440.7 287 71.1
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 2.0e-121 439.5 269 76.2
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 2.0e-121 439.5 269 76.2
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.9e-120 435.6 325 64.0
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 3.7e-120 435.3 282 72.3
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 7.0e-119 431.0 286 69.9
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.6e-118 429.9 288 68.4
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.3e-117 426.8 277 70.4
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 2.3e-114 416.0 269 70.3
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 5.8e-113 411.4 268 70.1
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.4e-111 406.8 285 64.2
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.9e-111 406.4 262 71.0
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 6.0e-110 401.4 246 75.2
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.5e-108 396.7 280 68.2
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 5.2e-106 388.3 280 66.4
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 5.8e-105 384.8 283 62.9
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 3.8e-104 382.1 285 62.5
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.2e-102 377.1 246 69.5
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 7.3e-100 367.9 239 74.1
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.4e-95 352.8 213 77.0
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 5.4e-87 325.1 262 57.3
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 2.1e-78 296.6 175 77.1
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 2.1e-75 286.6 265 48.7
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 6.5e-72 275.0 262 49.6
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.5e-70 269.2 253 50.6
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 6.0e-70 268.5 262 48.9
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 6.3e-51 205.3 254 41.3
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.5e-49 200.7 151 61.6
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 7.7e-49 198.4 111 85.6
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 6.7e-45 185.3 105 79.0
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 2.0e-44 183.7 310 40.6
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 9.7e-44 181.4 194 51.5
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 7.5e-36 155.2 166 49.4
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 1.2e-33 147.9 88 77.3
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.2e-30 137.9 77 83.1
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.6e-30 136.3 94 62.8
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 3.0e-29 133.3 94 62.8
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 1.7e-19 100.9 72 62.5
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 2.2e-19 100.5 69 65.2
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 4.0e-13 79.7 41 80.5
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 8.0e-06 55.5 47 59.6


User provided reference genes

Program Settings