Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03894 Striga asiatica HOM05D008179 ORTHO05D009362 3.4e-219 764.6 364 100.0
SGA_v2.0_scaffold114G32014 Striga asiatica HOM05D008179 ORTHO05D009362 1.9e-92 343.6 361 52.1
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 9.1e-71 271.6 330 40.3
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 2.8e-56 223.4 339 36.3
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 6.5e-53 212.2 336 34.8
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 9.4e-52 208.4 335 34.0
SalBow6G4060 Salvia bowleyana HOM05D008179 ORTHO05D009362 1.7e-48 197.6 330 33.3
DCAR_008111 Daucus carota HOM05D008179 ORTHO05D009362 2.2e-48 197.2 352 32.7
DCAR_008113 Daucus carota HOM05D008179 ORTHO05D009362 8.8e-42 175.3 346 30.3
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 1.1e-39 168.3 334 30.5
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 9.1e-39 165.2 291 33.3
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 2.8e-35 153.7 303 31.0
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 2.0e-33 147.5 338 29.6
TAR624G0619 Trochodendron aralioides HOM05D008179 ORTHO05D009362 2.1e-27 127.5 349 27.2
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 1.8e-26 124.4 295 28.5
Hma1.2p1_1682F.1_g297290 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 1.1e-20 105.1 217 32.7
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 4.3e-20 103.2 366 24.6
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 5.6e-20 102.8 342 25.7
Manes.11G148800 Manihot esculenta HOM05D008179 ORTHO05D009362 7.3e-20 102.4 341 25.8
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 1.2e-19 101.7 356 27.0
FAN14G5443 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.6e-19 101.3 361 25.5
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 3.6e-19 100.1 341 25.2
MD10G1311600 Malus domestica HOM05D008179 ORTHO05D009362 1.2e-17 95.1 348 25.6
MD05G1336000 Malus domestica HOM05D008179 ORTHO05D009362 2.0e-17 94.4 309 27.5
Oeu062972.1 Olea europaea HOM05D008179 ORTHO05D009362 7.5e-17 92.4 340 24.1
DCAR_008112 Daucus carota HOM05D008179 ORTHO05D009362 3.2e-15 87.0 215 27.9
Peaxi162Scf00263g00093 Petunia axillaris HOM05D009034 ORTHO05D009362 2.7e-14 84.0 272 25.0
Oeu030915.1 Olea europaea HOM05D000007 ORTHO05D000039 3.5e-14 83.6 372 23.1
Peaxi162Scf00016g00626 Petunia axillaris HOM05D009034 ORTHO05D009362 7.8e-14 82.4 286 25.2
FAN15G0940 Fragaria x ananassa HOM05D008179 ORTHO05D009362 5.1e-13 79.7 342 24.0
Dinv17850 Davidia involucrata HOM05D008179 ORTHO05D009362 1.9e-12 77.8 144 30.6
RcHm_v2.0_Chr3g0478691 Rosa chinensis HOM05D008179 ORTHO05D009362 3.3e-12 77.0 350 23.7
Dinv41784 Davidia involucrata HOM05D007726 ORTHO05D008819 4.3e-12 76.6 390 24.1
COL.COLO4_25855 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.6e-11 74.7 290 25.5
FAN05G4853 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.8e-11 73.9 275 26.2
Oeu007964.1 Olea europaea HOM05D000171 ORTHO05D016184 2.8e-11 73.9 295 24.7
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 4.7e-11 73.2 373 25.5
HanXRQChr07g0204801 Helianthus annuus HOM05D000007 ORTHO05D000039 1.1e-10 72.0 356 23.9
QL11p003899 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-10 71.6 339 22.4
Dinv26455 Davidia involucrata HOM05D000007 ORTHO05D013933 1.8e-10 71.2 348 24.1
MBI15_g33468_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.8e-10 71.2 302 24.8
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.8e-10 71.2 329 21.9
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 2.3e-10 70.9 373 23.9
HanXRQChr05g0144641 Helianthus annuus HOM05D000007 ORTHO05D009073 3.1e-10 70.5 298 25.8
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 5.2e-10 69.7 328 21.6
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 8.9e-10 68.9 343 24.5
CAN.G108.40 Capsicum annuum HOM05D000007 ORTHO05D000017 8.9e-10 68.9 178 27.5
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 8.9e-10 68.9 385 22.6
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-09 68.6 329 21.6
Nitab4.5_0003526g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.0e-09 67.8 293 21.5
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 2.6e-09 67.4 367 22.6
Nitab4.5_0003603g0160 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.4e-09 67.0 153 28.8
Lj1C674T3 Lonicera japonica HOM05D000007 ORTHO05D000039 4.4e-09 66.6 374 23.0
QL08p020067 Quercus lobata HOM05D000007 ORTHO05D000039 4.4e-09 66.6 358 23.7
Oeu002398.1 Olea europaea HOM05D000007 ORTHO05D000039 5.8e-09 66.2 385 22.9
Thhalv10026790m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.6e-09 65.9 288 23.6
FAN28G0391 Fragaria x ananassa HOM05D000007 ORTHO05D015648 7.6e-09 65.9 227 27.3
Rhsim09G0013900 Rhododendron simsii HOM05D000007 ORTHO05D000039 9.9e-09 65.5 386 23.8
AT1G50870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.3e-08 65.1 290 24.1
CSS0009515 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 1.3e-08 65.1 344 23.5
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.3e-08 65.1 281 20.6
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.3e-08 65.1 287 21.3
BraA07t30511Z Brassica rapa HOM05D011922 ORTHO05D007252 2.2e-08 64.3 313 23.6
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 2.2e-08 64.3 298 23.5
Aqoxy7G03510 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.7e-08 63.5 368 20.9
CAN.G1121.7 Capsicum annuum HOM05D000007 ORTHO05D000017 3.7e-08 63.5 248 23.8
Dinv06537 Davidia involucrata HOM05D000007 ORTHO05D000039 3.7e-08 63.5 338 21.3
Lj2P928T12 Lonicera japonica HOM05D000007 ORTHO05D000017 3.7e-08 63.5 234 26.5
Lj2P943T5 Lonicera japonica HOM05D000007 ORTHO05D000017 3.7e-08 63.5 234 26.5
Thhalv10015820m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 4.9e-08 63.2 144 28.5
Gohir.A08G015500 Gossypium hirsutum HOM05D000007 ORTHO05D000017 4.9e-08 63.2 133 30.1
Oeu026989.1 Olea europaea HOM05D000007 ORTHO05D007252 4.9e-08 63.2 366 23.2
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.9e-08 63.2 284 23.6
A07p28710 Brassica napus HOM05D011922 ORTHO05D007252 8.4e-08 62.4 313 23.6
Gorai.004G022100 Gossypium raimondii HOM05D000007 ORTHO05D000017 8.4e-08 62.4 132 31.1
Carub.0002s2261 Capsella rubella HOM05D011922 ORTHO05D007252 1.1e-07 62.0 327 23.9
Gohir.A08G015350 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.1e-07 62.0 149 29.5
TWI81G0714 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.4e-07 61.6 149 26.8
TAR626G0901 Trochodendron aralioides HOM05D000007 ORTHO05D000017 1.4e-07 61.6 365 23.6
Haze_13541 Corylus avellana HOM05D000007 ORTHO05D000039 1.9e-07 61.2 269 23.8
DCAR_028233 Daucus carota HOM05D008179 ORTHO05D009362 1.9e-07 61.2 213 24.9
CAN.G1375.11 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-07 60.8 247 23.5
COL.COLO4_20026 Corchorus olitorius HOM05D000007 ORTHO05D000521 2.4e-07 60.8 225 26.2
COL.COLO4_25856 Corchorus olitorius HOM05D000007 ORTHO05D000521 2.4e-07 60.8 307 23.8
FvH4_2g03910 Fragaria vesca HOM05D008179 ORTHO05D009362 2.4e-07 60.8 230 25.2
Phvul.006G157000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 2.4e-07 60.8 202 26.7
RcHm_v2.0_Chr5g0075691 Rosa chinensis HOM05D000007 ORTHO05D000017 3.2e-07 60.5 257 28.0
FvH4_7g33810 Fragaria vesca HOM05D000007 ORTHO05D009073 4.1e-07 60.1 320 24.7
Os07g0242600 Oryza sativa ssp. japonica HOM05D014280 ORTHO05D018069 4.1e-07 60.1 364 23.1
TWI14G0263 Tripterygium wilfordii HOM05D007726 ORTHO05D008819 4.1e-07 60.1 388 21.9
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.1e-07 60.1 262 22.9
BolC6t38364H Brassica oleracea HOM05D011922 ORTHO05D007252 5.4e-07 59.7 308 24.4
Dinv05293 Davidia involucrata HOM05D000007 ORTHO05D000039 5.4e-07 59.7 285 22.1
Glyma.13G211000 Glycine max HOM05D000007 ORTHO05D000017 5.4e-07 59.7 202 26.7
PSO832G0873 Papaver somniferum HOM05D000007 ORTHO05D000676 5.4e-07 59.7 269 25.3
RcHm_v2.0_Chr2g0131321 Rosa chinensis HOM05D000007 ORTHO05D000039 5.4e-07 59.7 162 26.5
CAN.G1209.3 Capsicum annuum HOM05D000007 ORTHO05D000017 7.1e-07 59.3 175 26.3
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 7.1e-07 59.3 197 26.4
Thhalv10000505m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.1e-07 59.3 279 21.5
FAN26G1160 Fragaria x ananassa HOM05D000007 ORTHO05D015648 7.1e-07 59.3 157 30.6
Rhsim08G0197100 Rhododendron simsii HOM05D000171 ORTHO05D000101 7.1e-07 59.3 367 23.4
Solyc10g075010.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 7.1e-07 59.3 140 28.6
Cpa.g.sc791.2 Carica papaya HOM05D000007 ORTHO05D000039 9.2e-07 58.9 239 22.6
Glyma.15G101600 Glycine max HOM05D000007 ORTHO05D000017 9.2e-07 58.9 183 26.2
QL11p000252 Quercus lobata HOM05D000007 ORTHO05D000039 9.2e-07 58.9 293 22.9
vmacro18930 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 9.2e-07 58.9 191 26.7
Migut.J01047 Erythranthe guttata HOM05D000007 ORTHO05D007252 1.2e-06 58.5 267 22.5
Thecc.01G185300 Theobroma cacao HOM05D000007 ORTHO05D000521 1.2e-06 58.5 299 26.1
FAN01G1574 Fragaria x ananassa HOM05D000007 ORTHO05D009073 1.6e-06 58.2 320 24.4
Sp4g22180 Schrenkiella parvula HOM05D011922 ORTHO05D007252 1.6e-06 58.2 308 24.0
VMungo0540G1914 Vigna mungo HOM05D000007 ORTHO05D000017 1.6e-06 58.2 183 25.1
Carub.0007s2126 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-06 57.8 327 25.4
CAN.G488.27 Capsicum annuum HOM05D000007 ORTHO05D000017 2.1e-06 57.8 212 25.0
Os10g0567900 Oryza sativa ssp. japonica HOM05D000007 ORTHO05D000676 2.1e-06 57.8 136 33.8
PGSC0003DMG400046539 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.1e-06 57.8 152 30.3
Thhalv10022356m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 2.7e-06 57.4 164 26.8
CiPaw.07G037500 Carya illinoinensis HOM05D000007 ORTHO05D000017 3.5e-06 57.0 232 25.0
Dinv05294 Davidia involucrata HOM05D000007 ORTHO05D000039 3.5e-06 57.0 157 26.8
Migut.C01220 Erythranthe guttata HOM05D000007 ORTHO05D000521 3.5e-06 57.0 234 24.8
Prupe.3G110400 Prunus persica HOM05D000007 ORTHO05D000039 3.5e-06 57.0 215 26.0
QL07p035948 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-06 57.0 197 25.9
PGSC0003DMG400013290 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.5e-06 57.0 183 26.8
GSVIVG01017506001 Vitis vinifera HOM05D000664 ORTHO05D000491 3.5e-06 57.0 170 29.4
PSO675G6799 Papaver somniferum HOM05D000007 ORTHO05D000676 4.6e-06 56.6 240 25.0
Sopen04g026420 Solanum pennellii HOM05D000007 ORTHO05D000039 4.6e-06 56.6 165 27.9
PGSC0003DMG400002699 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.6e-06 56.6 158 27.2
Lalb_Chr15g0087251 Lupinus albus HOM05D000007 ORTHO05D000017 6.0e-06 56.2 245 23.3
BcaB02g08397 Brassica carinata HOM05D000171 ORTHO05D000101 7.8e-06 55.8 299 22.4
CANSAT56G1116 Cannabis sativa HOM05D000007 ORTHO05D000017 7.8e-06 55.8 119 31.1
Peaxi162Scf00016g00068 Petunia axillaris HOM05D009034 ORTHO05D009362 7.8e-06 55.8 80 31.2


User provided reference genes

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