Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03870 Striga asiatica HOM05D004992 ORTHO05D006004 2.3e-69 265.4 130 100.0
Oeu051218.1 Olea europaea HOM05D004992 ORTHO05D006004 4.6e-25 118.2 112 53.6
Dinv13873 Davidia involucrata HOM05D004992 ORTHO05D006004 3.6e-22 108.6 112 47.3
Nitab4.5_0010096g0060 Nicotiana tabacum HOM05D004992 ORTHO05D006004 3.1e-21 105.5 130 42.3
Solyc02g080360.1 Solanum lycopersicum HOM05D004992 ORTHO05D006004 4.0e-21 105.1 115 44.3
Sopen02g025060 Solanum pennellii HOM05D004992 ORTHO05D006004 6.8e-21 104.4 115 44.3
Cc09_g01920 Coffea canephora HOM05D004992 ORTHO05D006004 9.9e-20 100.5 109 46.8
CSS0017416 Camellia sinensis var. sinensis HOM05D004992 ORTHO05D006004 1.7e-19 99.8 120 41.7
PGSC0003DMG400016488 Solanum tuberosum HOM05D004992 ORTHO05D006004 8.4e-19 97.4 116 41.4
Hma1.2p1_0091F.1_g046260 Hydrangea macrophylla HOM05D004992 ORTHO05D006004 1.6e-17 93.2 110 43.6
Migut.M01366 Erythranthe guttata HOM05D004992 ORTHO05D006004 3.5e-17 92.0 117 47.9
Peaxi162Scf00262g00051 Petunia axillaris HOM05D004992 ORTHO05D006004 7.8e-17 90.9 115 46.1
Duzib192G0598 Durio zibethinus HOM05D004992 ORTHO05D006004 3.0e-16 89.0 128 42.2
Oeu037355.1 Olea europaea HOM05D004992 ORTHO05D006004 5.1e-16 88.2 112 48.2
QL05p074036 Quercus lobata HOM05D004992 ORTHO05D006004 6.6e-16 87.8 120 40.0
CiPaw.10G069500 Carya illinoinensis HOM05D004992 ORTHO05D006004 1.9e-15 86.3 104 42.3
Thecc.06G217500 Theobroma cacao HOM05D004992 ORTHO05D006004 2.5e-15 85.9 116 44.8
Potri.004G018600 Populus trichocarpa HOM05D004992 ORTHO05D006004 3.3e-15 85.5 107 42.1
Gohir.D06G153200 Gossypium hirsutum HOM05D004992 ORTHO05D006004 5.6e-15 84.7 112 40.2
Gorai.010G179200 Gossypium raimondii HOM05D004992 ORTHO05D006004 5.6e-15 84.7 112 40.2
CiPaw.09G089400 Carya illinoinensis HOM05D004992 ORTHO05D006004 9.6e-15 84.0 104 41.3
Duzib235G0746 Durio zibethinus HOM05D004992 ORTHO05D006004 9.6e-15 84.0 116 44.0
Gohir.A06G147400 Gossypium hirsutum HOM05D004992 ORTHO05D006004 9.6e-15 84.0 112 39.3
Sabra04G0010400 Salix brachista HOM05D003428 ORTHO05D004131 9.6e-15 84.0 107 41.1
Haze_06774 Corylus avellana HOM05D003428 ORTHO05D004131 2.1e-14 82.8 101 44.6
CSS0025190 Camellia sinensis var. sinensis HOM05D004992 ORTHO05D006004 6.2e-14 81.3 111 42.3
CSS0030561 Camellia sinensis var. sinensis HOM05D004992 ORTHO05D006004 6.2e-14 81.3 111 42.3
Cfa000249 Carpinus fangiana HOM05D004992 ORTHO05D006004 6.2e-14 81.3 101 43.6
Ciclev10016836m.g Citrus clementina HOM05D004992 ORTHO05D006004 8.1e-14 80.9 105 42.9
Cpa.g.sc198.27 Carica papaya HOM05D004992 ORTHO05D006004 4.0e-13 78.6 107 40.2
TWI38G1979 Tripterygium wilfordii HOM05D004992 ORTHO05D006004 4.0e-13 78.6 100 43.0
Nitab4.5_0010096g0020 Nicotiana tabacum HOM05D000001 ORTHO05D009485 6.9e-13 77.8 108 40.7
FvH4_3g02450 Fragaria vesca HOM05D004992 ORTHO05D006004 1.2e-12 77.0 111 41.4
Manes.17G037200 Manihot esculenta HOM05D004992 ORTHO05D006004 1.2e-12 77.0 103 44.7
Duzib268G1102 Durio zibethinus HOM05D004992 ORTHO05D006004 1.5e-12 76.6 127 35.4
GSVIVG01012656001 Vitis vinifera HOM05D004992 ORTHO05D006004 4.4e-12 75.1 113 41.6
Thecc.07G043900 Theobroma cacao HOM05D004992 ORTHO05D006004 7.6e-12 74.3 125 40.0
FAN21G0406 Fragaria x ananassa HOM05D004992 ORTHO05D006004 9.9e-12 73.9 113 40.7
Prupe.4G023900 Prunus persica HOM05D004992 ORTHO05D006004 1.7e-11 73.2 109 39.4
Phvul.006G151000 Phaseolus vulgaris HOM05D004992 ORTHO05D006004 2.2e-11 72.8 97 40.2
Potri.011G000400 Populus trichocarpa HOM05D004992 ORTHO05D006004 2.9e-11 72.4 104 38.5
RcHm_v2.0_Chr5g0003701 Rosa chinensis HOM05D004992 ORTHO05D006004 2.9e-11 72.4 110 37.3
VMungo0540G0931 Vigna mungo HOM05D004992 ORTHO05D006004 2.9e-11 72.4 101 39.6
PGR042G3122 Punica granatum HOM05D004992 ORTHO05D006004 4.9e-11 71.6 108 37.0
Sed0007059 Sechium edule HOM05D004992 ORTHO05D006004 6.4e-11 71.2 110 35.5
TWI38G1613 Tripterygium wilfordii HOM05D004992 ORTHO05D006004 8.4e-11 70.9 100 39.0
Ciclev10009906m.g Citrus clementina HOM05D004992 ORTHO05D006004 1.1e-10 70.5 127 37.0
Sed0000784 Sechium edule HOM05D004992 ORTHO05D006004 3.2e-10 68.9 112 40.2
Rhsim04G0000900 Rhododendron simsii HOM05D004992 ORTHO05D006004 5.4e-10 68.2 106 41.5
Rhsim04G0002000 Rhododendron simsii HOM05D004992 ORTHO05D006004 5.4e-10 68.2 106 41.5
FAN25G3450 Fragaria x ananassa HOM05D004992 ORTHO05D006004 7.1e-10 67.8 110 38.2
Gohir.D05G366700 Gossypium hirsutum HOM05D004992 ORTHO05D006004 7.1e-10 67.8 114 36.0
Gorai.009G425100 Gossypium raimondii HOM05D004992 ORTHO05D006004 7.1e-10 67.8 114 36.0
ClCG01G022080 Citrullus lanatus HOM05D004992 ORTHO05D006004 9.3e-10 67.4 104 41.3
Lalb_Chr18g0056231 Lupinus albus HOM05D004992 ORTHO05D006004 9.3e-10 67.4 112 38.4
Nn1g07103 Nelumbo nucifera HOM05D004992 ORTHO05D006004 9.3e-10 67.4 110 40.9
TAR624G0245 Trochodendron aralioides HOM05D004992 ORTHO05D006004 1.2e-09 67.0 101 42.6
CANSAT56G2390 Cannabis sativa HOM05D004992 ORTHO05D006004 2.1e-09 66.2 122 34.4
COL.COLO4_31744 Corchorus olitorius HOM05D004992 ORTHO05D006004 2.1e-09 66.2 113 38.1
Peaxi162Scf00203g00113 Petunia axillaris HOM05D004992 ORTHO05D006004 2.1e-09 66.2 99 39.4
Eucgr.F03448 Eucalyptus grandis HOM05D004992 ORTHO05D006004 3.5e-09 65.5 124 33.9
Gohir.A04G019200 Gossypium hirsutum HOM05D004992 ORTHO05D006004 3.5e-09 65.5 114 35.1
Hma1.2p1_0813F.1_g222590 Hydrangea macrophylla HOM05D004992 ORTHO05D006004 3.5e-09 65.5 89 44.9
Lsat_1_v5_gn_7_17380 Lactuca sativa HOM05D004992 ORTHO05D006004 3.5e-09 65.5 132 31.8
Glyma.13G206400 Glycine max HOM05D004992 ORTHO05D006004 4.6e-09 65.1 105 39.0
MELO3C007381.2 Cucumis melo HOM05D004992 ORTHO05D006004 7.8e-09 64.3 105 41.0
Gorai.002G086600 Gossypium raimondii HOM05D004992 ORTHO05D006004 1.0e-08 63.9 107 40.2
Gohir.A01G077800 Gossypium hirsutum HOM05D004992 ORTHO05D006004 1.3e-08 63.5 107 40.2
MELO3C002469.2 Cucumis melo HOM05D004992 ORTHO05D006004 2.3e-08 62.8 121 38.8
Potri.001G421100 Populus trichocarpa HOM05D004992 ORTHO05D006004 2.3e-08 62.8 129 34.1
Sc16g0006270 Simmondsia chinensis HOM05D004992 ORTHO05D006004 2.3e-08 62.8 108 34.3
Ca_00623_v3 Cicer arietinum L. HOM05D004992 ORTHO05D006004 3.0e-08 62.4 111 36.9
Phvul.006G038900 Phaseolus vulgaris HOM05D004992 ORTHO05D006004 3.9e-08 62.0 105 41.0
arahy.Tifrunner.gnm1.ann1.FJ4Y8F Arachis hypogaea HOM05D004992 ORTHO05D006004 6.6e-08 61.2 108 38.9
DCAR_008138 Daucus carota HOM05D004992 ORTHO05D006004 8.7e-08 60.8 102 33.3
Eucgr.D01305 Eucalyptus grandis HOM05D004992 ORTHO05D006004 8.7e-08 60.8 128 35.9
Lj4g0012462 Lotus japonicus HOM05D004992 ORTHO05D006004 8.7e-08 60.8 107 36.4
Lalb_Chr17g0348391 Lupinus albus HOM05D004992 ORTHO05D006004 1.1e-07 60.5 107 30.8
arahy.Tifrunner.gnm1.ann1.9Z1Z9Z Arachis hypogaea HOM05D004992 ORTHO05D006004 1.5e-07 60.1 105 36.2
VMungo1215G1625 Vigna mungo HOM05D004992 ORTHO05D006004 1.9e-07 59.7 104 35.6
MBI18_g24808_MAGBIO Magnolia biondii HOM05D004992 ORTHO05D006004 2.5e-07 59.3 109 33.0
Potri.011G136500 Populus trichocarpa HOM05D004992 ORTHO05D006004 2.5e-07 59.3 127 34.6
BcaNung02246 Brassica carinata HOM05D004992 ORTHO05D006004 4.3e-07 58.5 120 38.3
Eucgr.L03501 Eucalyptus grandis HOM05D004992 ORTHO05D006004 4.3e-07 58.5 108 38.0
Glyma.17G015100 Glycine max HOM05D004992 ORTHO05D006004 7.3e-07 57.8 106 34.9
Thhalv10027254m.g Eutrema salsugineum HOM05D004992 ORTHO05D006004 9.6e-07 57.4 116 35.3
Medtr2g022820 Medicago truncatula HOM05D004992 ORTHO05D006004 9.6e-07 57.4 102 36.3
Phvul.003G077200 Phaseolus vulgaris HOM05D004992 ORTHO05D006004 9.6e-07 57.4 110 33.6
CsaV3_1G010900 Cucumis sativus L. HOM05D004992 ORTHO05D006004 1.6e-06 56.6 107 37.4
Eucgr.E04090 Eucalyptus grandis HOM05D004992 ORTHO05D006004 1.6e-06 56.6 106 33.0
Manes.03G126800 Manihot esculenta HOM05D004992 ORTHO05D006004 1.6e-06 56.6 125 34.4
Prupe.4G209300 Prunus persica HOM05D004992 ORTHO05D006004 2.1e-06 56.2 106 34.9
TWI38G2258 Tripterygium wilfordii HOM05D004992 ORTHO05D006004 2.1e-06 56.2 126 34.1
AL7G32150 Arabidopsis lyrata HOM05D004992 ORTHO05D006004 2.8e-06 55.8 113 32.7
AT4G21780 Arabidopsis thaliana HOM05D004992 ORTHO05D006004 2.8e-06 55.8 117 32.5
ClCG03G004870 Citrullus lanatus HOM05D004992 ORTHO05D006004 2.8e-06 55.8 102 35.3
Glyma.07G259100 Glycine max HOM05D004992 ORTHO05D006004 2.8e-06 55.8 107 34.6
TPR.G29123 Trifolium pratense HOM05D004992 ORTHO05D006004 2.8e-06 55.8 108 33.3
Rhsim06G0215300 Rhododendron simsii HOM05D004992 ORTHO05D006004 4.8e-06 55.1 110 34.5
Migut.M01784 Erythranthe guttata HOM05D004992 ORTHO05D006004 8.1e-06 54.3 110 32.7


User provided reference genes

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