Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03843 Striga asiatica HOM05D012724 ORTHO05D010595 3.7e-210 734.6 355 100.0
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 1.2e-54 218.0 145 74.5
SGA_v2.0_scaffold7G03767 Striga asiatica HOM05D012724 ORTHO05D010595 3.5e-51 206.5 109 90.8
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 8.9e-47 191.8 298 43.6
SGA_v2.0_scaffold7G03732 Striga asiatica HOM05D003543 ORTHO05D004112 4.9e-45 186.0 173 59.0
SGA_v2.0_scaffold7G03749 Striga asiatica HOM05D012724 ORTHO05D010595 5.8e-38 162.5 447 32.2
SGA_v2.0_scaffold39G15154 Striga asiatica HOM05D012724 ORTHO05D010595 1.3e-34 151.4 340 35.9
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 8.1e-32 142.1 160 49.4
SGA_v2.0_scaffold90G27929 Striga asiatica HOM05D012724 ORTHO05D010595 4.6e-27 126.3 327 34.3
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 1.1e-25 121.7 130 52.3
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 4.8e-24 116.3 139 48.2
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 3.8e-21 106.7 131 49.6
SGA_v2.0_scaffold90G27931 Striga asiatica HOM05D012724 ORTHO05D010595 4.6e-19 99.8 126 47.6
SGA_v2.0_scaffold7G04010 Striga asiatica HOM05D012724 ORTHO05D010595 7.9e-19 99.0 112 46.4
SGA_v2.0_scaffold90G27918 Striga asiatica HOM05D012724 ORTHO05D010595 1.4e-15 88.2 103 48.5
SGA_v2.0_scaffold7G03932 Striga asiatica HOM05D000002 ORTHO05D010595 1.3e-13 81.6 152 40.1
SGA_v2.0_scaffold7G04012 Striga asiatica HOM05D000449 ORTHO05D010595 5.5e-12 76.3 59 61.0
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 3.9e-10 70.1 39 87.2
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 1.6e-08 64.7 99 38.4
DCAR_009419 Daucus carota HOM05D000007 ORTHO05D000017 4.8e-08 63.2 167 29.3
BcaB05g23737 Brassica carinata HOM05D000007 ORTHO05D000017 6.2e-08 62.8 149 27.5
A02p25510 Brassica napus HOM05D000007 ORTHO05D000017 1.1e-07 62.0 149 28.2
PSO210G5368 Papaver somniferum HOM05D000007 ORTHO05D000017 1.1e-07 62.0 117 32.5
Sp6g04950 Schrenkiella parvula HOM05D000007 ORTHO05D000017 1.1e-07 62.0 149 26.8
BcaC03g16267 Brassica carinata HOM05D000007 ORTHO05D000017 1.4e-07 61.6 149 27.5
C02p40630 Brassica napus HOM05D000007 ORTHO05D000017 1.4e-07 61.6 149 27.5
BolC2t10085H Brassica oleracea HOM05D000007 ORTHO05D000017 1.4e-07 61.6 149 27.5
BraA02t07538Z Brassica rapa HOM05D000007 ORTHO05D000017 1.4e-07 61.6 149 27.5
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.8e-07 61.2 103 35.0
Medtr0129s0050 Medicago truncatula HOM05D000007 ORTHO05D000039 1.8e-07 61.2 52 51.9
SGA_v2.0_scaffold89G27539 Striga asiatica HOM05D011185 ORTHO05D010595 1.8e-07 61.2 88 39.8
COL.COLO4_22628 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.4e-07 60.8 138 31.9
Oeu009398.1 Olea europaea HOM05D000007 ORTHO05D000017 2.4e-07 60.8 121 33.9
Gohir.A10G227233 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.1e-07 60.5 85 44.7
Gorai.011G277300 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.1e-07 60.5 111 40.5
Gorai.011G277500 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.1e-07 60.5 111 40.5
FvH4_3g41160 Fragaria vesca HOM05D000007 ORTHO05D000017 4.0e-07 60.1 93 39.8
FAN09G3540 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.3e-07 59.7 108 35.2
Gohir.D08G025877 Gossypium hirsutum HOM05D000007 ORTHO05D000017 5.3e-07 59.7 136 25.7
RcHm_v2.0_Chr2g0154571 Rosa chinensis HOM05D000007 ORTHO05D000017 6.9e-07 59.3 91 39.6
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 9.0e-07 58.9 95 36.8
Oeu047069.1 Olea europaea HOM05D000007 ORTHO05D000017 9.0e-07 58.9 121 31.4
Thhalv10028697m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 1.2e-06 58.5 149 26.8
Gohir.D08G025800 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.2e-06 58.5 104 33.7
PSO133G0007 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-06 58.5 127 30.7
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 1.2e-06 58.5 53 50.9
FAN05G3599 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.5e-06 58.2 108 35.2
Carub.0006s3183 Capsella rubella HOM05D000007 ORTHO05D000017 2.0e-06 57.8 87 34.5
CARHR253610 Cardamine hirsuta HOM05D000007 ORTHO05D000017 2.0e-06 57.8 149 25.5
FAN25G1004 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.0e-06 57.8 102 36.3
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 2.0e-06 57.8 139 28.1
RcHm_v2.0_Chr2g0154521 Rosa chinensis HOM05D000007 ORTHO05D000017 2.0e-06 57.8 80 42.5
RcHm_v2.0_Chr2g0154541 Rosa chinensis HOM05D000007 ORTHO05D000017 2.0e-06 57.8 79 41.8
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 2.0e-06 57.8 89 39.3
FAN13G1585 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.6e-06 57.4 162 32.1
Gohir.A10G227500 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.6e-06 57.4 94 42.6
Gorai.011G281200 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.6e-06 57.4 104 40.4
Lj3A655G20 Lonicera japonica HOM05D000007 ORTHO05D000017 2.6e-06 57.4 117 32.5
Medtr2g021770 Medicago truncatula HOM05D000007 ORTHO05D000039 2.6e-06 57.4 53 49.1
PSO478G2700 Papaver somniferum HOM05D000007 ORTHO05D000017 2.6e-06 57.4 134 31.3
PSO782G1055 Papaver somniferum HOM05D000007 ORTHO05D000017 2.6e-06 57.4 78 38.5
Peaxi162Scf00231g00251 Petunia axillaris HOM05D000007 ORTHO05D000017 2.6e-06 57.4 81 38.3
RcHm_v2.0_Chr2g0154711 Rosa chinensis HOM05D000007 ORTHO05D000017 2.6e-06 57.4 89 41.6
Cfa007607 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.4e-06 57.0 79 38.0
CsaV3_3G041350 Cucumis sativus L. HOM05D000007 ORTHO05D000039 3.4e-06 57.0 55 52.7
FvH4_5g11823 Fragaria vesca HOM05D000007 ORTHO05D000039 3.4e-06 57.0 92 37.0
FAN16G2277 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.4e-06 57.0 102 35.3
Gohir.D10G241000 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.4e-06 57.0 111 39.6
Gorai.004G021300 Gossypium raimondii HOM05D000007 ORTHO05D000017 3.4e-06 57.0 104 32.7
Medtr4g055820 Medicago truncatula HOM05D000007 ORTHO05D000039 3.4e-06 57.0 54 46.3
Medtr6g461660 Medicago truncatula HOM05D000007 ORTHO05D000039 3.4e-06 57.0 99 33.3
RcHm_v2.0_Chr6g0294901 Rosa chinensis HOM05D000007 ORTHO05D000017 3.4e-06 57.0 98 34.7
Migut.J01312 Erythranthe guttata HOM05D000007 ORTHO05D000017 4.5e-06 56.6 136 33.1
FvH4_6g33740 Fragaria vesca HOM05D000007 ORTHO05D000017 4.5e-06 56.6 76 40.8
FvH4_6g33751 Fragaria vesca HOM05D000007 ORTHO05D000017 4.5e-06 56.6 108 35.2
FvH4_6g40000 Fragaria vesca HOM05D000007 ORTHO05D000017 4.5e-06 56.6 59 40.7
FAN02G1298 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.5e-06 56.6 76 40.8
FAN05G1410 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.5e-06 56.6 76 40.8
FAN09G3678 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.5e-06 56.6 76 40.8
FAN14G2437 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.5e-06 56.6 76 40.8
PSO801G0844 Papaver somniferum HOM05D000007 ORTHO05D000017 4.5e-06 56.6 93 36.6
PSO832G0042 Papaver somniferum HOM05D000007 ORTHO05D000017 4.5e-06 56.6 83 38.6
RcHm_v2.0_Chr2g0154601 Rosa chinensis HOM05D000007 ORTHO05D000017 4.5e-06 56.6 76 42.1
Aqoxy4G00863 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 5.8e-06 56.2 181 26.0
MSTRG.7163 Avicennia marina HOM05D000007 ORTHO05D000017 5.8e-06 56.2 156 31.4
Cfa007606 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.8e-06 56.2 79 38.0
Migut.M01404 Erythranthe guttata HOM05D000007 ORTHO05D000017 5.8e-06 56.2 134 27.6
Gohir.D10G241700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.8e-06 56.2 84 44.0
Gorai.011G276700 Gossypium raimondii HOM05D000007 ORTHO05D000039 5.8e-06 56.2 84 44.0
Gorai.011G281100 Gossypium raimondii HOM05D000007 ORTHO05D000039 5.8e-06 56.2 84 44.0
PGSC0003DMG400022273 Solanum tuberosum HOM05D000007 ORTHO05D000949 5.8e-06 56.2 134 33.6
THA.LOC104806333 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 5.8e-06 56.2 94 35.1
Gohir.D10G241100 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.6e-06 55.8 84 44.0
Gorai.011G276100 Gossypium raimondii HOM05D000007 ORTHO05D000039 7.6e-06 55.8 84 44.0
Lj1g0009362 Lotus japonicus HOM05D000007 ORTHO05D000039 7.6e-06 55.8 104 30.8
Medtr8g063440 Medicago truncatula HOM05D000007 ORTHO05D000039 7.6e-06 55.8 54 50.0
PSO782G4409 Papaver somniferum HOM05D000007 ORTHO05D000017 7.6e-06 55.8 81 39.5
RcHm_v2.0_Chr1g0350191 Rosa chinensis HOM05D000007 ORTHO05D000039 7.6e-06 55.8 85 34.1
RcHm_v2.0_Chr5g0006271 Rosa chinensis HOM05D000007 ORTHO05D000017 7.6e-06 55.8 140 30.7
MSTRG.13115 Avicennia marina HOM05D000007 ORTHO05D000017 1.0e-05 55.5 131 28.2
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 1.0e-05 55.5 76 42.1
PSO478G2862 Papaver somniferum HOM05D000007 ORTHO05D000017 1.0e-05 55.5 115 30.4
Phvul.004G050100 Phaseolus vulgaris HOM05D000007 ORTHO05D000039 1.0e-05 55.5 155 32.9
Psat7g145040 Pisum sativum HOM05D000007 ORTHO05D000039 1.0e-05 55.5 107 35.5
RcHm_v2.0_Chr2g0154551 Rosa chinensis HOM05D000007 ORTHO05D000017 1.0e-05 55.5 81 38.3
SalBow1G2862 Salvia bowleyana HOM05D000007 ORTHO05D000017 1.0e-05 55.5 135 28.9


User provided reference genes

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