Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03838 Striga asiatica HOM05D011575 ORTHO05D004912 3.9e-54 214.5 108 100.0
SGA_v2.0_scaffold4G01914 Striga asiatica HOM05D011575 ORTHO05D004912 8.4e-41 170.2 108 81.5
MSTRG.7209 Avicennia marina HOM05D011575 ORTHO05D004912 6.7e-38 160.6 106 75.5
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 4.5e-34 147.9 108 74.1
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 9.3e-32 140.2 110 66.4
SalBow8G3401 Salvia bowleyana HOM05D011575 ORTHO05D004912 9.3e-32 140.2 108 66.7
Oeu002741.1 Olea europaea HOM05D011575 ORTHO05D004912 2.0e-21 105.9 111 55.0
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 1.8e-19 99.4 91 54.9
unitig_0.g942 Utricularia gibba HOM05D011575 ORTHO05D004912 6.9e-19 97.4 109 52.3
PGSC0003DMG400016452 Solanum tuberosum HOM05D011575 ORTHO05D004912 5.9e-18 94.4 97 53.6
Sopen02g025250 Solanum pennellii HOM05D011575 ORTHO05D004912 2.3e-14 82.4 97 47.4
Solyc02g080550.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 2.0e-13 79.3 94 47.9
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 1.3e-12 76.6 111 43.2
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 3.7e-12 75.1 111 44.1
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 3.7e-12 75.1 109 42.2
Sopen02g025260 Solanum pennellii HOM05D011575 ORTHO05D004912 5.3e-11 71.2 109 40.4
Solyc02g080560.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 7.0e-11 70.9 109 40.4
Haze_06802 Corylus avellana HOM05D061810 ORTHO05D004912 3.5e-10 68.6 88 43.2
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.7e-09 66.2 101 42.6
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 2.9e-09 65.5 86 45.3
Medtr8g468960 Medicago truncatula HOM05D011727 ORTHO05D004912 3.8e-09 65.1 91 48.4
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 8.5e-09 63.9 95 41.1
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 8.5e-09 63.9 85 48.2
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 3.2e-08 62.0 87 46.0
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 4.2e-08 61.6 87 43.7
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 4.2e-08 61.6 87 43.7
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 5.5e-08 61.2 92 42.4
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 5.5e-08 61.2 93 46.2
Ca_22861_v3 Cicer arietinum L. HOM05D011727 ORTHO05D004912 5.5e-08 61.2 91 47.3
FAN25G2989 Fragaria x ananassa HOM05D011727 ORTHO05D004912 5.5e-08 61.2 94 43.6
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 7.2e-08 60.8 111 44.1
FAN21G2105 Fragaria x ananassa HOM05D011727 ORTHO05D004912 7.2e-08 60.8 117 40.2
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 7.2e-08 60.8 87 44.8
FvH4_3g02050 Fragaria vesca HOM05D011727 ORTHO05D004912 9.4e-08 60.5 94 44.7
Glyma.14G163600 Glycine max HOM05D011727 ORTHO05D004912 9.4e-08 60.5 93 44.1
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.2e-07 60.1 87 47.1
RcHm_v2.0_Chr5g0002951 Rosa chinensis HOM05D011727 ORTHO05D004912 1.2e-07 60.1 112 42.9
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 2.1e-07 59.3 87 42.5
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 2.1e-07 59.3 115 41.7
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 2.7e-07 58.9 95 44.2
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 2.7e-07 58.9 90 41.1
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 2.7e-07 58.9 102 38.2
Lj1g0009560 Lotus japonicus HOM05D011727 ORTHO05D004912 2.7e-07 58.9 91 42.9
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.6e-07 58.5 99 41.4
Glyma.13G082350 Glycine max HOM05D011727 ORTHO05D004912 3.6e-07 58.5 93 38.7
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 3.6e-07 58.5 87 44.8
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 4.7e-07 58.2 103 36.9
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 4.7e-07 58.2 82 46.3
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 4.7e-07 58.2 104 40.4
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 6.1e-07 57.8 95 44.2
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 8.0e-07 57.4 103 42.7
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 8.0e-07 57.4 97 40.2
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 1.0e-06 57.0 91 45.1
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 1.0e-06 57.0 88 42.0
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 1.4e-06 56.6 105 41.0
DCAR_024934 Daucus carota HOM05D011575 ORTHO05D004912 1.8e-06 56.2 91 41.8
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.3e-06 55.8 99 40.4
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 2.3e-06 55.8 89 38.2
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.0e-06 55.5 99 40.4
Glyma.13G082600 Glycine max HOM05D011727 ORTHO05D004912 3.0e-06 55.5 99 38.4
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.0e-06 55.5 87 44.8
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 3.0e-06 55.5 96 43.8
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 3.0e-06 55.5 91 38.5
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 4.0e-06 55.1 97 40.2
Medtr8g468940 Medicago truncatula HOM05D011727 ORTHO05D004912 4.0e-06 55.1 91 41.8
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 4.0e-06 55.1 88 43.2
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 5.2e-06 54.7 99 39.4
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 6.7e-06 54.3 101 42.6
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 8.8e-06 53.9 96 39.6
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 8.8e-06 53.9 83 39.8
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 8.8e-06 53.9 89 42.7


User provided reference genes

Program Settings