Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03815 Striga asiatica HOM05D001231 ORTHO05D400489 5.1e-157 557.8 295 100.0
Gohir.A01G033800 Gossypium hirsutum HOM05D001231 ORTHO05D001012 8.8e-08 62.0 47 59.6
Gohir.D01G023520 Gossypium hirsutum HOM05D001231 ORTHO05D001012 8.8e-08 62.0 47 59.6
Gohir.D01G023526 Gossypium hirsutum HOM05D001231 ORTHO05D001012 8.8e-08 62.0 47 59.6
Gorai.002G029700 Gossypium raimondii HOM05D001231 ORTHO05D001012 8.8e-08 62.0 47 59.6
Medtr8g070780 Medicago truncatula HOM05D001231 ORTHO05D001012 3.4e-07 60.1 61 47.5
Oeu059528.1 Olea europaea HOM05D001231 ORTHO05D001012 5.7e-07 59.3 49 53.1
CARHR144790 Cardamine hirsuta HOM05D001231 ORTHO05D001012 7.5e-07 58.9 55 49.1
Gorai.002G029500 Gossypium raimondii HOM05D001231 ORTHO05D001012 7.5e-07 58.9 47 57.4
Nn7g38191 Nelumbo nucifera HOM05D001231 ORTHO05D001012 9.8e-07 58.5 49 51.0
Peaxi162Scf00088g01110 Petunia axillaris HOM05D001231 ORTHO05D001012 1.7e-06 57.8 49 51.0
Migut.M01517 Erythranthe guttata HOM05D001231 ORTHO05D001012 2.2e-06 57.4 53 45.3
Nn7g38192 Nelumbo nucifera HOM05D001231 ORTHO05D001012 2.2e-06 57.4 55 45.5
Nn7g38263 Nelumbo nucifera HOM05D001231 ORTHO05D001012 2.2e-06 57.4 50 50.0
Psat4g112280 Pisum sativum HOM05D001231 ORTHO05D001012 2.2e-06 57.4 46 56.5
EL10Ac5g10882 Beta vulgaris HOM05D001231 ORTHO05D001012 2.8e-06 57.0 49 53.1
C02p38770 Brassica napus HOM05D001231 ORTHO05D001012 2.8e-06 57.0 44 52.3
Medtr8g070790 Medicago truncatula HOM05D001231 ORTHO05D001012 2.8e-06 57.0 49 51.0
AT2G31953 Arabidopsis thaliana HOM05D001231 ORTHO05D001012 3.7e-06 56.6 53 45.3
Ciclev10006362m.g Citrus clementina HOM05D001231 ORTHO05D001012 3.7e-06 56.6 60 43.3
Nn7g38190 Nelumbo nucifera HOM05D001231 ORTHO05D001012 3.7e-06 56.6 62 41.9
Thecc.04G140800 Theobroma cacao HOM05D001231 ORTHO05D001012 3.7e-06 56.6 44 54.5
AL4G27280 Arabidopsis lyrata HOM05D001231 ORTHO05D001012 4.8e-06 56.2 53 43.4
AL80U10050 Arabidopsis lyrata HOM05D001231 ORTHO05D001012 4.8e-06 56.2 53 43.4
BcaC09g49338 Brassica carinata HOM05D001231 ORTHO05D001012 4.8e-06 56.2 61 47.5
A01p29870 Brassica napus HOM05D001231 ORTHO05D001012 4.8e-06 56.2 61 47.5
C01p37750 Brassica napus HOM05D001231 ORTHO05D001012 4.8e-06 56.2 61 47.5
C03p57970 Brassica napus HOM05D001231 ORTHO05D001012 4.8e-06 56.2 47 55.3
BolC1t03737H Brassica oleracea HOM05D001231 ORTHO05D001012 4.8e-06 56.2 61 47.5
BraA01t03115Z Brassica rapa HOM05D001231 ORTHO05D001012 4.8e-06 56.2 61 47.5
Os03g0130300 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 4.8e-06 56.2 49 51.0
PSO541G0572 Papaver somniferum HOM05D001231 ORTHO05D001012 4.8e-06 56.2 47 48.9
C05p21990 Brassica napus HOM05D001231 ORTHO05D001012 6.3e-06 55.8 47 51.1
Cc06_g07890 Coffea canephora HOM05D001231 ORTHO05D001012 6.3e-06 55.8 69 39.1
Migut.E00740 Erythranthe guttata HOM05D001231 ORTHO05D001012 6.3e-06 55.8 54 44.4
SalBow6G1343 Salvia bowleyana HOM05D001231 ORTHO05D001012 6.3e-06 55.8 58 48.3
EL10Ac5g10881 Beta vulgaris HOM05D001231 ORTHO05D001012 8.3e-06 55.5 60 41.7
Glyma.08G268000 Glycine max HOM05D001231 ORTHO05D001012 8.3e-06 55.5 44 54.5
Sc19g0000440 Simmondsia chinensis HOM05D001231 ORTHO05D001012 8.3e-06 55.5 55 45.5


User provided reference genes

Program Settings