Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03810 Striga asiatica HOM05D010621 ORTHO05D000126 1.3e-148 529.6 258 100.0
SGA_v2.0_scaffold27G11486 Striga asiatica HOM05D000552 ORTHO05D000469 3.3e-27 126.3 146 45.9
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 2.8e-26 123.2 332 28.9
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 9.1e-25 118.2 206 35.4
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 6.1e-21 105.5 187 36.9
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 3.1e-17 93.2 246 29.7
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 9.4e-14 81.6 328 23.8
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-13 80.9 96 41.7
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-12 77.4 271 24.4
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 8.8e-12 75.1 111 36.0
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 5.7e-11 72.4 229 24.9
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 7.5e-11 72.0 114 36.8
SGA_v2.0_scaffold253G45145 Striga asiatica HOM05D039416 ORTHO05D000126 7.5e-11 72.0 188 29.3
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 2.8e-10 70.1 264 23.5
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 2.8e-10 70.1 70 42.9
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 3.7e-10 69.7 109 36.7
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 6.3e-10 68.9 107 36.4
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 4.1e-09 66.2 100 34.0
Dinv30133 Davidia involucrata HOM05D000003 ORTHO05D000126 9.1e-09 65.1 174 29.3
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 9.1e-09 65.1 63 46.0
Dinv23120 Davidia involucrata HOM05D000003 ORTHO05D000126 2.0e-08 63.9 253 22.9
Atru.chr2.1870 Acer truncatum HOM05D000003 ORTHO05D000126 5.9e-08 62.4 190 25.8
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 5.9e-08 62.4 108 31.5
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.9e-07 60.1 246 20.7
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 5.0e-07 59.3 82 35.4
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-06 56.6 102 30.4
Eucgr.K00628 Eucalyptus grandis HOM05D000003 ORTHO05D000126 5.5e-06 55.8 61 42.6
SGA_v2.0_scaffold308G48078 Striga asiatica HOM05D000003 ORTHO05D000126 5.5e-06 55.8 137 31.4
QL02p066394 Quercus lobata HOM05D000003 ORTHO05D000126 7.2e-06 55.5 73 35.6
SGA_v2.0_scaffold6G03387 Striga asiatica HOM05D016874 ORTHO05D404320 7.2e-06 55.5 112 30.4
Atru.chr4.156 Acer truncatum HOM05D000003 ORTHO05D000126 9.4e-06 55.1 152 25.7
Lj4g0023781 Lotus japonicus HOM05D000003 ORTHO05D000126 9.4e-06 55.1 44 52.3


User provided reference genes

Program Settings