Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 2.5e-92 342.0 167 100.0
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 7.1e-63 244.2 163 71.8
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 8.7e-61 237.3 177 68.4
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 1.5e-60 236.5 163 72.4
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 3.3e-60 235.3 165 68.5
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 9.6e-60 233.8 179 65.9
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 3.7e-59 231.9 166 69.3
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 8.1e-59 230.7 165 68.5
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 1.1e-58 230.3 166 66.9
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 1.8e-58 229.6 168 68.5
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 3.1e-58 228.8 163 71.8
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 2.0e-57 226.1 165 66.7
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 2.6e-57 225.7 158 69.6
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 2.6e-57 225.7 158 69.6
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 2.6e-57 225.7 165 68.5
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 2.6e-57 225.7 165 66.1
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 7.6e-57 224.2 166 68.1
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 9.9e-57 223.8 165 68.5
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 1.3e-56 223.4 165 67.3
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.7e-56 223.0 166 68.7
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 3.8e-56 221.9 168 65.5
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 3.8e-56 221.9 165 66.1
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 3.8e-56 221.9 165 66.1
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 8.4e-56 220.7 165 66.7
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 1.9e-55 219.5 166 68.1
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 3.2e-55 218.8 166 65.1
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 4.2e-55 218.4 159 67.9
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 4.2e-55 218.4 148 71.6
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 5.5e-55 218.0 170 67.1
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 7.1e-55 217.6 166 65.7
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 9.3e-55 217.2 167 67.1
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 2.7e-54 215.7 127 80.3
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 4.6e-54 214.9 170 65.3
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.3e-53 213.4 141 74.5
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 1.3e-53 213.4 141 74.5
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 1.8e-53 213.0 136 75.0
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 1.8e-53 213.0 166 63.9
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 2.3e-53 212.6 165 64.2
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 2.3e-53 212.6 171 66.7
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 3.9e-53 211.8 168 65.5
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 5.1e-53 211.5 167 64.7
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 5.1e-53 211.5 166 63.9
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 6.7e-53 211.1 163 65.6
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 8.7e-53 210.7 159 64.8
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 1.3e-51 206.8 120 81.7
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 1.3e-51 206.8 165 63.0
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 1.6e-51 206.5 170 64.1
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 4.8e-51 204.9 168 63.7
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 6.2e-51 204.5 165 63.6
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 6.2e-51 204.5 163 65.6
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 6.2e-51 204.5 163 65.6
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 6.2e-51 204.5 147 69.4
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 8.2e-51 204.1 163 65.6
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 1.4e-50 203.4 163 65.0
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 1.4e-50 203.4 163 65.0
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 2.4e-50 202.6 164 64.0
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 3.1e-50 202.2 135 71.1
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 3.1e-50 202.2 164 64.0
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 3.1e-50 202.2 164 65.2
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 3.1e-50 202.2 135 73.3
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 9.0e-50 200.7 170 60.0
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 9.0e-50 200.7 134 71.6
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 4.5e-49 198.4 164 63.4
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 5.8e-49 198.0 154 66.2
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 2.9e-48 195.7 120 76.7
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 2.9e-48 195.7 126 75.4
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 2.9e-48 195.7 120 75.8
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 6.5e-48 194.5 136 71.3
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 6.5e-48 194.5 124 75.0
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 1.9e-47 193.0 226 50.0
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 4.6e-46 188.3 120 75.0
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 1.8e-45 186.4 130 70.0
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 1.5e-44 183.3 120 72.5
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 1.9e-44 183.0 120 73.3
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 4.3e-44 181.8 154 64.3
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 5.7e-44 181.4 195 54.4
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 4.8e-43 178.3 144 63.2
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 3.1e-42 175.6 131 64.1
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 3.1e-42 175.6 127 67.7
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 4.5e-41 171.8 120 68.3
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 1.3e-40 170.2 121 67.8
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 8.5e-40 167.5 165 57.6
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 1.9e-39 166.4 120 66.7
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 1.1e-36 157.1 116 69.8
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 9.7e-36 154.1 118 59.3
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 6.9e-34 147.9 120 60.8
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 1.0e-32 144.1 85 81.2
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 1.9e-31 139.8 111 60.4
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 2.1e-30 136.3 122 57.4
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 1.4e-29 133.7 127 56.7
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 2.3e-29 132.9 98 64.3
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 9.7e-28 127.5 119 57.1
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 1.7e-27 126.7 110 60.0
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 1.7e-27 126.7 166 46.4
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 4.5e-25 118.6 165 44.2
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 2.7e-22 109.4 89 60.7
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 2.8e-19 99.4 127 42.5
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 6.3e-19 98.2 90 55.6
Nitab4.5_0001409g0190 Nicotiana tabacum HOM05D007052 ORTHO05D008871 6.5e-16 88.2 74 62.2
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 9.4e-15 84.3 45 88.9
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 1.0e-13 80.9 48 79.2
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 1.0e-13 80.9 123 42.3
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 1.0e-13 80.9 127 37.8
FAN25G3667 Fragaria x ananassa HOM05D007052 ORTHO05D008871 2.6e-12 76.3 39 89.7
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 1.7e-11 73.6 59 59.3
Nitab4.5_0007209g0010 Nicotiana tabacum HOM05D007052 ORTHO05D008871 5.3e-10 68.6 39 76.9
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 2.0e-09 66.6 178 29.8
PRCOL_00004464 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 7.7e-09 64.7 119 32.8
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 9.4e-07 57.8 127 31.5
MCO14G271 Micromonas commoda HOM05D007052 ORTHO05D008871 8.0e-06 54.7 123 30.1


User provided reference genes

Program Settings