Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 5.6e-261 903.7 431 100.0
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 2.0e-210 735.7 429 82.8
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 2.7e-207 725.3 432 81.0
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 7.4e-205 717.2 432 80.1
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 4.1e-203 711.4 433 78.5
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 5.0e-201 704.5 431 77.0
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 6.5e-201 704.1 429 77.6
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 1.9e-200 702.6 429 77.2
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 5.5e-200 701.0 437 76.9
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 6.1e-199 697.6 429 77.2
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 7.9e-199 697.2 429 76.9
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 1.0e-198 696.8 424 78.1
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 3.0e-198 695.3 428 76.4
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 3.9e-198 694.9 427 76.8
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 3.9e-198 694.9 428 76.4
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 1.1e-197 693.3 428 78.0
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 1.5e-197 693.0 429 75.3
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 2.5e-197 692.2 428 75.5
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 2.5e-197 692.2 429 76.5
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 2.5e-197 692.2 429 75.8
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 5.7e-197 691.0 429 75.5
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 7.4e-197 690.6 431 76.3
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 2.8e-196 688.7 428 75.5
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 4.8e-196 688.0 429 75.3
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 1.1e-195 686.8 434 75.3
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 5.3e-195 684.5 431 75.2
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 5.3e-195 684.5 429 75.1
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 6.9e-195 684.1 430 76.5
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 6.9e-195 684.1 429 75.5
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 1.5e-194 682.9 427 75.4
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 2.0e-194 682.6 431 74.7
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 4.5e-194 681.4 436 74.3
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 5.9e-194 681.0 427 76.1
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 1.3e-193 679.9 432 73.4
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 5.0e-193 677.9 427 74.9
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 5.0e-193 677.9 469 70.8
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 6.5e-193 677.6 432 73.1
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 8.5e-193 677.2 438 75.8
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 8.5e-193 677.2 429 75.1
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 1.4e-192 676.4 455 71.0
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 2.5e-192 675.6 429 73.9
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 4.2e-192 674.9 431 73.8
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 7.2e-192 674.1 430 73.3
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 7.2e-192 674.1 428 75.0
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 7.2e-192 674.1 455 71.0
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 9.4e-192 673.7 429 75.5
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 1.2e-191 673.3 428 73.6
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 1.2e-191 673.3 429 74.6
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 1.6e-191 672.9 410 77.8
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 2.1e-191 672.5 427 75.2
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 2.7e-191 672.2 428 73.6
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 6.1e-191 671.0 432 73.6
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 7.9e-191 670.6 429 72.5
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 7.9e-191 670.6 429 74.4
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 3.9e-190 668.3 429 73.4
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 1.5e-189 666.4 429 72.5
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 1.5e-189 666.4 429 73.0
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 2.6e-189 665.6 429 72.0
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 3.3e-189 665.2 430 72.6
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 3.3e-189 665.2 431 72.2
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 7.4e-189 664.1 429 74.1
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 1.3e-188 663.3 430 71.9
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 2.2e-188 662.5 427 72.6
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 2.8e-188 662.1 429 71.6
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 2.8e-188 662.1 429 71.3
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 2.8e-188 662.1 429 71.8
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 3.7e-188 661.8 430 73.5
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 3.7e-188 661.8 427 72.6
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 3.7e-188 661.8 418 75.6
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 4.8e-188 661.4 430 71.6
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 6.3e-188 661.0 429 71.6
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 6.3e-188 661.0 429 73.9
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 8.2e-188 660.6 430 71.2
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 1.1e-187 660.2 429 71.1
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 1.1e-187 660.2 430 71.2
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 1.4e-187 659.8 429 71.6
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.8e-187 659.4 427 72.4
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 3.1e-187 658.7 423 73.8
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 4.1e-187 658.3 461 69.4
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 4.1e-187 658.3 429 71.1
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 5.3e-187 657.9 430 70.7
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 1.2e-186 656.8 514 63.4
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 1.5e-186 656.4 429 72.0
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 5.9e-186 654.4 425 72.5
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 7.7e-186 654.1 431 72.4
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 2.9e-185 652.1 433 71.6
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 3.8e-185 651.7 466 67.6
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 1.9e-184 649.4 429 69.2
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 7.2e-184 647.5 427 71.7
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 1.6e-183 646.4 427 71.7
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 3.9e-182 641.7 412 75.2
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.5e-181 639.8 427 71.0
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 1.6e-178 629.8 412 71.1
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 3.5e-178 628.6 437 68.0
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 5.9e-178 627.9 405 72.3
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 7.7e-178 627.5 429 69.2
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 7.7e-178 627.5 412 70.9
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 1.3e-177 626.7 411 71.0
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 1.3e-177 626.7 436 67.7
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 2.2e-177 625.9 411 71.0
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 1.1e-176 623.6 416 73.1
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 9.4e-176 620.5 445 69.0
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 6.7e-174 614.4 432 69.7
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 5.7e-173 611.3 469 65.7
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 1.7e-172 609.8 433 64.2
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 9.1e-171 604.0 438 67.4
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 2.7e-170 602.4 431 64.0
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 2.4e-163 579.3 410 68.5
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 5.4e-163 578.2 429 67.4
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 1.7e-161 573.2 431 67.1
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 8.3e-156 554.3 430 60.9
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 1.8e-155 553.1 433 61.7
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 1.1e-152 543.9 429 60.4
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 1.0e-150 537.3 371 70.9
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 2.3e-150 536.2 430 60.2
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 8.3e-140 501.1 368 63.3
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 1.9e-139 500.0 448 59.8
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 1.6e-138 496.9 429 60.1
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 1.1e-136 490.7 311 74.0
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 4.7e-135 485.3 370 63.2
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 3.0e-129 466.1 440 50.7
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 1.4e-126 457.2 472 53.4
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 3.3e-120 436.0 467 52.5
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 1.4e-118 430.6 471 47.1
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 3.8e-116 422.5 282 72.7
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 1.5e-112 410.6 479 45.7
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 3.3e-104 382.9 437 47.4
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 2.6e-48 197.2 115 75.7
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 5.8e-32 142.9 89 69.7
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 5.8e-32 142.9 89 69.7
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 2.9e-31 140.6 97 64.9
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 8.3e-31 139.0 115 58.3
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 1.1e-30 138.7 80 81.2
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 5.1e-20 103.2 69 63.8
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 1.5e-19 101.7 66 69.7
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 4.3e-19 100.1 141 41.1
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 2.1e-18 97.8 66 66.7
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 1.4e-17 95.1 64 65.6
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 4.0e-17 93.6 55 76.4
SEGI_21127 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.4e-09 67.8 68 47.1
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 8.4e-07 59.3 36 69.4
CAN.G327.2 Capsicum annuum HOM05D001287 ORTHO05D010951 3.2e-06 57.4 25 96.0
MCO13G238 Micromonas commoda HOM05D004309 ORTHO05D005588 5.4e-06 56.6 187 28.3


User provided reference genes

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