Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03749 Striga asiatica HOM05D012724 ORTHO05D010595 0.0e+00 1126.7 548 100.0
SGA_v2.0_scaffold39G15154 Striga asiatica HOM05D012724 ORTHO05D010595 2.7e-82 310.5 595 38.7
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 4.7e-63 246.5 671 31.9
SGA_v2.0_scaffold90G27931 Striga asiatica HOM05D012724 ORTHO05D010595 4.0e-62 243.4 264 53.4
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 3.9e-49 200.3 371 38.5
SGA_v2.0_scaffold90G27929 Striga asiatica HOM05D012724 ORTHO05D010595 2.8e-47 194.1 245 48.6
SGA_v2.0_scaffold90G27918 Striga asiatica HOM05D012724 ORTHO05D010595 2.9e-44 184.1 338 38.5
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 2.8e-39 167.5 346 36.7
SGA_v2.0_scaffold7G03843 Striga asiatica HOM05D012724 ORTHO05D010595 2.6e-37 161.0 447 32.2
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 3.5e-26 124.0 224 38.4
SGA_v2.0_scaffold7G03767 Striga asiatica HOM05D012724 ORTHO05D010595 1.9e-24 118.2 196 42.9
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 5.8e-21 106.7 146 42.5
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 2.1e-15 88.2 140 40.7
SGA_v2.0_scaffold7G04012 Striga asiatica HOM05D000449 ORTHO05D010595 5.8e-13 80.1 227 29.5
SGA_v2.0_scaffold7G04010 Striga asiatica HOM05D012724 ORTHO05D010595 1.3e-12 79.0 162 32.7
SGA_v2.0_scaffold7G03732 Striga asiatica HOM05D003543 ORTHO05D004112 1.9e-11 75.1 170 35.3
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 4.6e-10 70.5 71 53.5
SGA_v2.0_scaffold902G53710 Striga asiatica HOM05D001429 ORTHO05D001420 6.7e-09 66.6 43 76.7
SGA_v2.0_scaffold90G27922 Striga asiatica HOM05D012724 ORTHO05D010595 6.7e-09 66.6 70 50.0
Oeu028341.1 Olea europaea HOM05D000007 ORTHO05D000039 1.9e-08 65.1 114 36.0
Phvul.004G051300 Phaseolus vulgaris HOM05D000007 ORTHO05D000039 3.3e-08 64.3 147 30.6
FAN18G2360 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.6e-08 63.5 159 30.2
FAN18G3215 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.6e-08 63.5 159 30.2
SGA_v2.0_scaffold7G03932 Striga asiatica HOM05D000002 ORTHO05D010595 7.4e-08 63.2 115 36.5
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 7.4e-08 63.2 201 29.4
A02p25510 Brassica napus HOM05D000007 ORTHO05D000017 1.3e-07 62.4 98 30.6
BraA02t07538Z Brassica rapa HOM05D000007 ORTHO05D000017 2.1e-07 61.6 98 29.6
Ca_25332_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 2.8e-07 61.2 135 29.6
MSTRG.13115 Avicennia marina HOM05D000007 ORTHO05D000017 3.7e-07 60.8 94 33.0
BcaC03g16267 Brassica carinata HOM05D000007 ORTHO05D000017 3.7e-07 60.8 98 29.6
C02p40630 Brassica napus HOM05D000007 ORTHO05D000017 3.7e-07 60.8 98 29.6
BolC2t10085H Brassica oleracea HOM05D000007 ORTHO05D000017 3.7e-07 60.8 98 29.6
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 3.7e-07 60.8 191 23.6
PSO210G5368 Papaver somniferum HOM05D000007 ORTHO05D000017 3.7e-07 60.8 96 35.4
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 4.8e-07 60.5 222 25.2
Duzib268G0869 Durio zibethinus HOM05D001429 ORTHO05D001420 6.2e-07 60.1 43 65.1
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 6.2e-07 60.1 80 42.5
Oeu025157.1 Olea europaea HOM05D000007 ORTHO05D000039 8.1e-07 59.7 155 29.7
Thecc.01G395600 Theobroma cacao HOM05D001429 ORTHO05D001420 8.1e-07 59.7 43 65.1
GSVIVG01018290001 Vitis vinifera HOM05D001429 ORTHO05D001420 8.1e-07 59.7 43 62.8
Gohir.A08G138700 Gossypium hirsutum HOM05D001429 ORTHO05D001420 1.1e-06 59.3 43 62.8
Gorai.004G166200 Gossypium raimondii HOM05D001429 ORTHO05D001420 1.1e-06 59.3 43 62.8
Manes.05G055400 Manihot esculenta HOM05D001429 ORTHO05D001420 1.1e-06 59.3 43 65.1
Oeu009401.1 Olea europaea HOM05D000007 ORTHO05D000017 1.1e-06 59.3 97 36.1
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 1.1e-06 59.3 115 34.8
Phvul.004G050400 Phaseolus vulgaris HOM05D000222 ORTHO05D000039 1.4e-06 58.9 175 26.9
Psat7g148960 Pisum sativum HOM05D000007 ORTHO05D000039 1.4e-06 58.9 150 25.3
Cfa007609 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.8e-06 58.5 97 38.1
MSTRG.20686 Avicennia marina HOM05D001429 ORTHO05D001420 2.4e-06 58.2 41 68.3
FvH4_5g11823 Fragaria vesca HOM05D000007 ORTHO05D000039 2.4e-06 58.2 149 30.9
FAN08G2946 Fragaria x ananassa HOM05D000007 ORTHO05D019190 2.4e-06 58.2 155 30.3
Phvul.004G030700 Phaseolus vulgaris HOM05D000007 ORTHO05D000039 2.4e-06 58.2 53 50.9
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 2.4e-06 58.2 64 43.8
Thecc.10G092800 Theobroma cacao HOM05D000007 ORTHO05D000039 2.4e-06 58.2 174 28.2
BcaB05g23737 Brassica carinata HOM05D000007 ORTHO05D000017 3.1e-06 57.8 90 30.0
Gohir.D08G160000 Gossypium hirsutum HOM05D001429 ORTHO05D001420 3.1e-06 57.8 43 62.8
Lj9A555T37 Lonicera japonica HOM05D001429 ORTHO05D001420 3.1e-06 57.8 41 65.9
Thecc.10G169100 Theobroma cacao HOM05D000007 ORTHO05D000039 3.1e-06 57.8 99 36.4
TWI32G0895 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.1e-06 57.8 150 30.0
EL10Ac2g03744 Beta vulgaris HOM05D000007 ORTHO05D000017 4.0e-06 57.4 144 30.6
Thhalv10028697m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 4.0e-06 57.4 88 30.7
Glyma.18G251400 Glycine max HOM05D001429 ORTHO05D001420 4.0e-06 57.4 43 65.1
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.0e-06 57.4 193 28.5
Peaxi162Scf00231g00251 Petunia axillaris HOM05D000007 ORTHO05D000017 4.0e-06 57.4 92 35.9
QL04p029261 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-06 57.4 138 34.1
QL05p044326 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-06 57.4 138 34.1
QL05p069384 Quercus lobata HOM05D000007 ORTHO05D000017 4.0e-06 57.4 159 26.4
QL06p011077 Quercus lobata HOM05D000003 ORTHO05D000007 4.0e-06 57.4 178 23.6
SalBow8G4267 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.0e-06 57.4 119 27.7
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 4.0e-06 57.4 143 29.4
Thecc.10G169200 Theobroma cacao HOM05D000007 ORTHO05D000039 4.0e-06 57.4 105 37.1
CSS0006185 Camellia sinensis var. sinensis HOM05D001429 ORTHO05D001420 5.3e-06 57.0 43 65.1
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.3e-06 57.0 122 33.6
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.3e-06 57.0 193 28.5
Medtr5g097680 Medicago truncatula HOM05D000007 ORTHO05D000039 5.3e-06 57.0 112 34.8
Oeu031414.1 Olea europaea HOM05D001429 ORTHO05D001420 5.3e-06 57.0 43 62.8
Oeu047069.1 Olea europaea HOM05D000007 ORTHO05D000017 5.3e-06 57.0 164 22.6
Peaxi162Scf00646g00004 Petunia axillaris HOM05D000007 ORTHO05D000017 5.3e-06 57.0 86 34.9
THA.LOC104806333 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 5.3e-06 57.0 91 31.9
TWI77G0834 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.3e-06 57.0 70 40.0
Dinv43611 Davidia involucrata HOM05D001429 ORTHO05D001420 6.9e-06 56.6 43 65.1
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 6.9e-06 56.6 169 29.6
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 6.9e-06 56.6 191 23.0
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 6.9e-06 56.6 55 47.3
Peaxi162Scf00158g10012 Petunia axillaris HOM05D000007 ORTHO05D000017 6.9e-06 56.6 99 31.3
QL04p029296 Quercus lobata HOM05D000007 ORTHO05D000039 6.9e-06 56.6 138 34.1
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 6.9e-06 56.6 85 37.6
Sp6g04950 Schrenkiella parvula HOM05D000007 ORTHO05D000017 6.9e-06 56.6 90 28.9
THA.LOC104813618 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 6.9e-06 56.6 91 31.9
Thecc.10G168300 Theobroma cacao HOM05D000007 ORTHO05D000039 6.9e-06 56.6 99 39.4
BcaB01g05040 Brassica carinata HOM05D000007 ORTHO05D000017 9.0e-06 56.2 72 34.7
Lsat_1_v5_gn_7_12161 Lactuca sativa HOM05D001429 ORTHO05D001420 9.0e-06 56.2 43 62.8
Manes.01G274200 Manihot esculenta HOM05D001429 ORTHO05D001420 9.0e-06 56.2 43 60.5
Phvul.L001689 Phaseolus vulgaris HOM05D000007 ORTHO05D000039 9.0e-06 56.2 48 50.0


User provided reference genes

Program Settings