Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03735 Striga asiatica HOM05D002959 ORTHO05D003237 9.3e-96 353.6 187 100.0
SGA_v2.0_scaffold131G34461 Striga asiatica HOM05D002959 ORTHO05D003237 4.0e-14 82.4 65 60.0
Migut.M00412 Erythranthe guttata HOM05D002959 ORTHO05D003237 3.7e-12 75.9 67 55.2
MSTRG.6556 Avicennia marina HOM05D002959 ORTHO05D003237 1.4e-11 73.9 76 50.0
Oeu041931.2 Olea europaea HOM05D002959 ORTHO05D003237 6.0e-10 68.6 64 48.4
CAN.G846.4 Capsicum annuum HOM05D002959 ORTHO05D003237 7.8e-10 68.2 76 44.7
ECA233G6126 Erigeron canadensis HOM05D002959 ORTHO05D003237 1.7e-09 67.0 62 53.2
Prupe.3G218400 Prunus persica HOM05D002959 ORTHO05D003237 2.3e-09 66.6 64 50.0
HanXRQChr15g0496411 Helianthus annuus HOM05D002959 ORTHO05D003237 3.0e-09 66.2 76 43.4
MD17G1095300 Malus domestica HOM05D002959 ORTHO05D003237 3.0e-09 66.2 64 51.6
Lsat_1_v5_gn_8_128621 Lactuca sativa HOM05D002959 ORTHO05D003237 3.9e-09 65.9 76 44.7
PGR042G1226 Punica granatum HOM05D002959 ORTHO05D003237 3.9e-09 65.9 71 45.1
DCAR_012948 Daucus carota HOM05D002959 ORTHO05D003237 6.6e-09 65.1 67 49.3
FAN09G0349 Fragaria x ananassa HOM05D002959 ORTHO05D003237 6.6e-09 65.1 71 43.7
Peaxi162Scf00007g00929 Petunia axillaris HOM05D002959 ORTHO05D003237 6.6e-09 65.1 69 46.4
unitig_699.g19615 Utricularia gibba HOM05D000109 ORTHO05D003237 6.6e-09 65.1 67 46.3
Sopen07g026060 Solanum pennellii HOM05D002959 ORTHO05D003237 8.6e-09 64.7 69 44.9
CAN.G846.3 Capsicum annuum HOM05D002959 ORTHO05D003237 1.5e-08 63.9 75 44.0
Cc05_g04870 Coffea canephora HOM05D002959 ORTHO05D003237 1.9e-08 63.5 71 43.7
Nitab4.5_0002137g0130 Nicotiana tabacum HOM05D002959 ORTHO05D003237 1.9e-08 63.5 69 46.4
PGSC0003DMG400025497 Solanum tuberosum HOM05D002959 ORTHO05D003237 1.9e-08 63.5 67 47.8
Nn1g03594 Nelumbo nucifera HOM05D002959 ORTHO05D003237 2.5e-08 63.2 67 47.8
RcHm_v2.0_Chr2g0159721 Rosa chinensis HOM05D002959 ORTHO05D003237 2.5e-08 63.2 71 43.7
Solyc07g052430.3 Solanum lycopersicum HOM05D002959 ORTHO05D003237 2.5e-08 63.2 69 43.5
FAN05G3149 Fragaria x ananassa HOM05D002959 ORTHO05D003237 5.6e-08 62.0 65 46.2
FAN02G0167 Fragaria x ananassa HOM05D002959 ORTHO05D003237 1.2e-07 60.8 65 44.6
CAN.G846.2 Capsicum annuum HOM05D002959 ORTHO05D003237 2.1e-07 60.1 78 39.7
FAN14G2056 Fragaria x ananassa HOM05D002959 ORTHO05D003237 2.8e-07 59.7 65 44.6
Nitab4.5_0009026g0020 Nicotiana tabacum HOM05D002959 ORTHO05D003237 2.8e-07 59.7 69 42.0
FvH4_6g43380 Fragaria vesca HOM05D002959 ORTHO05D003237 3.6e-07 59.3 65 44.6
MD17G1095500 Malus domestica HOM05D002959 ORTHO05D003237 3.6e-07 59.3 64 46.9
CANSAT64G0672 Cannabis sativa HOM05D002959 ORTHO05D003237 4.7e-07 58.9 73 39.7
CARHR126200 Cardamine hirsuta HOM05D002959 ORTHO05D003237 4.7e-07 58.9 76 38.2
Dinv39701 Davidia involucrata HOM05D002959 ORTHO05D003237 4.7e-07 58.9 62 46.8
Lj1A759T41 Lonicera japonica HOM05D002959 ORTHO05D003237 4.7e-07 58.9 61 47.5
Lj1A760T25 Lonicera japonica HOM05D002959 ORTHO05D003237 4.7e-07 58.9 61 47.5
Manes.12G075500 Manihot esculenta HOM05D002959 ORTHO05D003237 4.7e-07 58.9 76 38.2
Hma1.2p1_0948F.1_g240420 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 8.1e-07 58.2 67 44.8
Hma1.2p1_1768F.1_g301525 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 8.1e-07 58.2 67 44.8
Sabra09G0090200 Salix brachista HOM05D002959 ORTHO05D003237 8.1e-07 58.2 62 45.2
Carub.0004s1373 Capsella rubella HOM05D002959 ORTHO05D003237 1.1e-06 57.8 76 39.5
PGSC0003DMG400025496 Solanum tuberosum HOM05D002959 ORTHO05D003237 1.1e-06 57.8 69 42.0
AT2G32380 Arabidopsis thaliana HOM05D002959 ORTHO05D003237 1.4e-06 57.4 76 38.2
ECA233G3122 Erigeron canadensis HOM05D000906 ORTHO05D000713 1.4e-06 57.4 69 40.6
Manes.13G070900 Manihot esculenta HOM05D002959 ORTHO05D003237 1.4e-06 57.4 59 45.8
Potri.009G117800 Populus trichocarpa HOM05D002959 ORTHO05D003237 1.4e-06 57.4 64 42.2
TAR626G0389 Trochodendron aralioides HOM05D002959 ORTHO05D003237 1.4e-06 57.4 57 47.4
Ciclev10016979m.g Citrus clementina HOM05D002959 ORTHO05D003237 1.8e-06 57.0 67 43.3
Aa31LG5G4670 Aethionema arabicum HOM05D002959 ORTHO05D003237 2.4e-06 56.6 71 39.4
arahy.Tifrunner.gnm1.ann1.18208U Arachis hypogaea HOM05D002959 ORTHO05D003237 2.4e-06 56.6 71 39.4
arahy.Tifrunner.gnm1.ann1.X4J0KT Arachis hypogaea HOM05D002959 ORTHO05D003237 2.4e-06 56.6 71 39.4
Solyc07g052440.3 Solanum lycopersicum HOM05D002959 ORTHO05D003237 2.4e-06 56.6 69 40.6
HanXRQChr15g0496401 Helianthus annuus HOM05D002959 ORTHO05D003237 3.1e-06 56.2 69 39.1
Sp4g14750 Schrenkiella parvula HOM05D002959 ORTHO05D003237 3.1e-06 56.2 63 42.9
AL4G27750 Arabidopsis lyrata HOM05D002959 ORTHO05D003237 4.0e-06 55.8 76 36.8
Hma1.2p1_1768F.1_g301550 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 4.0e-06 55.8 64 42.2
QL08p033321 Quercus lobata HOM05D002959 ORTHO05D003237 5.2e-06 55.5 64 45.3
Carub.0001s0449 Capsella rubella HOM05D002959 ORTHO05D003237 6.8e-06 55.1 71 39.4
Cpa.g.sc4.170 Carica papaya HOM05D002959 ORTHO05D003237 6.8e-06 55.1 76 36.8
Cc05_g04880 Coffea canephora HOM05D002959 ORTHO05D003237 8.9e-06 54.7 73 34.2
Thhalv10017325m.g Eutrema salsugineum HOM05D002959 ORTHO05D003237 8.9e-06 54.7 71 38.0


User provided reference genes

Program Settings