Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03723 Striga asiatica HOM05D002727 ORTHO05D002856 3.0e-54 214.9 107 100.0
SGA_v2.0_scaffold122G33196 Striga asiatica HOM05D002727 ORTHO05D002856 2.0e-50 202.2 105 95.2
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 1.3e-41 172.9 123 76.4
SGA_v2.0_scaffold668G53415 Striga asiatica HOM05D002727 ORTHO05D002856 2.1e-39 165.6 120 75.8
SGA_v2.0_scaffold172G38950 Striga asiatica HOM05D002727 ORTHO05D002856 1.1e-27 126.7 74 85.1
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 1.4e-19 99.8 122 45.9
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 5.3e-19 97.8 106 50.9
SGA_v2.0_scaffold180G39653 Striga asiatica HOM05D000089 ORTHO05D000104 7.1e-16 87.4 72 69.4
CAN.G185.21 Capsicum annuum HOM05D002727 ORTHO05D002856 1.5e-10 69.7 120 36.7
Solyc05g008320.1 Solanum lycopersicum HOM05D002727 ORTHO05D002856 5.8e-10 67.8 55 54.5
Sopen05g004150 Solanum pennellii HOM05D002727 ORTHO05D002856 5.8e-10 67.8 55 54.5
PGSC0003DMG400030506 Solanum tuberosum HOM05D002727 ORTHO05D002856 5.8e-10 67.8 55 54.5
MD13G1026900 Malus domestica HOM05D002727 ORTHO05D002856 3.2e-08 62.0 78 37.2
Peaxi162Scf00205g00023 Petunia axillaris HOM05D002727 ORTHO05D002856 9.3e-08 60.5 120 35.0
TPR.G24442 Trifolium pratense HOM05D002727 ORTHO05D002856 1.2e-07 60.1 60 40.0
FAN02G0051 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.9e-07 57.4 55 41.8
FAN05G5197 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.9e-07 57.4 55 41.8
FAN14G2593 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.9e-07 57.4 55 41.8
FAN05G5380 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.0e-06 57.0 55 41.8
Oeu019229.1 Olea europaea HOM05D034535 ORTHO05D002856 1.3e-06 56.6 48 54.2
Actinidia15249 Actinidia chinensis HOM05D002727 ORTHO05D002856 1.8e-06 56.2 65 35.4
Nitab4.5_0006134g0020 Nicotiana tabacum HOM05D002727 ORTHO05D002856 1.8e-06 56.2 106 35.8
Actinidia36683 Actinidia chinensis HOM05D002727 ORTHO05D002856 3.0e-06 55.5 65 35.4
HanXRQChr15g0488631 Helianthus annuus HOM05D002727 ORTHO05D002856 3.9e-06 55.1 55 38.2
ECA232G4731 Erigeron canadensis HOM05D002727 ORTHO05D002856 6.7e-06 54.3 110 31.8
Sabra08G0096800 Salix brachista HOM05D002727 ORTHO05D002856 8.7e-06 53.9 56 37.5


User provided reference genes

Program Settings