Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03722 Striga asiatica HOM05D026462 ORTHO05D004423 1.4e-63 246.1 125 100.0
MSTRG.16038 Avicennia marina HOM05D004793 ORTHO05D004423 2.3e-21 105.9 135 50.4
MSTRG.7149 Avicennia marina HOM05D004793 ORTHO05D004423 1.5e-20 103.2 137 48.2
Oeu057040.1 Olea europaea HOM05D026462 ORTHO05D049473 1.2e-11 73.6 106 48.1
Oeu030108.1 Olea europaea HOM05D026462 ORTHO05D049473 3.1e-10 68.9 107 46.7
CAN.G696.14 Capsicum annuum HOM05D018828 ORTHO05D004423 3.4e-09 65.5 128 35.9
Solyc11g012520.1 Solanum lycopersicum HOM05D018828 ORTHO05D004423 5.8e-09 64.7 127 38.6
Migut.M01424 Erythranthe guttata HOM05D018828 ORTHO05D004423 2.2e-08 62.8 136 39.7
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 2.9e-08 62.4 133 38.3
QL05p068371 Quercus lobata HOM05D004793 ORTHO05D004423 3.7e-08 62.0 131 37.4
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 3.7e-08 62.0 131 37.4
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 4.9e-08 61.6 91 40.7
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 6.4e-08 61.2 129 32.6
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 6.4e-08 61.2 128 37.5
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 8.3e-08 60.8 134 29.9
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 1.1e-07 60.5 142 33.1
Lsat_1_v5_gn_7_13860 Lactuca sativa HOM05D004793 ORTHO05D004423 1.4e-07 60.1 90 41.1
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.4e-07 60.1 79 44.3
Rhsim13G0143200 Rhododendron simsii HOM05D004793 ORTHO05D004423 1.9e-07 59.7 132 34.8
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 2.4e-07 59.3 140 32.9
Cc09_g00630 Coffea canephora HOM05D000222 ORTHO05D003997 3.2e-07 58.9 89 39.3
CiPaw.10G079700 Carya illinoinensis HOM05D004793 ORTHO05D004423 4.1e-07 58.5 143 30.8
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 4.1e-07 58.5 134 37.3
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 4.1e-07 58.5 126 37.3
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 9.2e-07 57.4 147 37.4
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 1.6e-06 56.6 125 36.8
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 1.6e-06 56.6 123 34.1
CANSAT56G2188 Cannabis sativa HOM05D004793 ORTHO05D004423 2.1e-06 56.2 93 39.8
Migut.H01618 Erythranthe guttata HOM05D026462 ORTHO05D004423 2.1e-06 56.2 116 38.8
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 2.1e-06 56.2 122 37.7
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 2.7e-06 55.8 129 36.4
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 3.5e-06 55.5 126 38.9
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 3.5e-06 55.5 138 32.6
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 3.5e-06 55.5 140 33.6
DCAR_002230 Daucus carota HOM05D004793 ORTHO05D004423 4.6e-06 55.1 139 33.8
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 4.6e-06 55.1 127 39.4
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 6.0e-06 54.7 133 36.8
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 6.0e-06 54.7 133 33.1
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 7.8e-06 54.3 133 33.8
TPR.G6007 Trifolium pratense HOM05D004793 ORTHO05D004423 7.8e-06 54.3 142 33.8


User provided reference genes

Program Settings