Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 2.7e-100 368.6 182 100.0
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 3.1e-64 248.8 175 72.0
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 1.5e-45 186.8 180 55.6
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 2.0e-42 176.4 178 53.9
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 6.0e-39 164.9 177 50.8
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 6.0e-39 164.9 179 54.2
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 1.5e-37 160.2 165 54.5
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 7.3e-37 157.9 137 56.2
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 2.8e-36 156.0 177 52.0
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 2.6e-34 149.4 186 48.4
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 4.9e-33 145.2 165 46.1
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 7.1e-32 141.4 180 45.6
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 4.6e-31 138.7 152 51.3
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 1.3e-30 137.1 182 42.3
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 1.1e-29 134.0 144 49.3
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 1.5e-29 133.7 171 46.8
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 4.3e-29 132.1 137 51.8
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 4.3e-29 132.1 137 51.8
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 4.3e-29 132.1 177 41.2
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 5.6e-29 131.7 140 50.7
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 5.6e-29 131.7 182 44.0
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 7.3e-29 131.3 171 45.0
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 1.2e-28 130.6 181 42.5
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 2.8e-28 129.4 181 42.5
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 2.8e-28 129.4 137 51.1
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 4.7e-28 128.6 152 47.4
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 1.1e-27 127.5 160 46.2
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 1.4e-27 127.1 179 43.0
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 1.8e-27 126.7 136 50.7
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 2.4e-27 126.3 165 43.0
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 3.1e-27 125.9 169 42.0
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 3.1e-27 125.9 136 50.0
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 4.0e-27 125.6 148 49.3
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 4.0e-27 125.6 137 48.9
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 5.2e-27 125.2 164 44.5
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 1.2e-26 124.0 136 51.5
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 1.2e-26 124.0 173 42.8
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 1.5e-26 123.6 178 42.1
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 1.5e-26 123.6 164 44.5
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 3.4e-26 122.5 181 41.4
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 3.4e-26 122.5 134 51.5
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 4.4e-26 122.1 134 48.5
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 5.8e-26 121.7 155 42.6
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 5.8e-26 121.7 147 47.6
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 7.6e-26 121.3 165 43.6
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 7.6e-26 121.3 137 46.7
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 7.6e-26 121.3 180 42.2
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 1.3e-25 120.6 126 46.8
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 1.3e-25 120.6 190 38.4
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 1.7e-25 120.2 150 45.3
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 1.7e-25 120.2 138 46.4
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 2.2e-25 119.8 168 42.3
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 2.2e-25 119.8 163 43.6
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 2.9e-25 119.4 169 42.0
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 2.9e-25 119.4 179 44.7
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 3.8e-25 119.0 173 41.6
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 4.9e-25 118.6 134 47.0
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 4.9e-25 118.6 165 43.6
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 6.4e-25 118.2 172 42.4
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 6.4e-25 118.2 169 40.2
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 8.4e-25 117.9 138 49.3
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 8.4e-25 117.9 192 39.1
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 1.4e-24 117.1 184 37.5
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 1.4e-24 117.1 143 44.1
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 1.4e-24 117.1 160 43.8
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.4e-24 117.1 162 42.0
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 2.4e-24 116.3 152 42.8
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 2.4e-24 116.3 152 42.8
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 3.2e-24 115.9 134 46.3
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 3.2e-24 115.9 134 46.3
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 3.2e-24 115.9 147 43.5
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 4.2e-24 115.5 160 41.9
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 4.2e-24 115.5 135 50.4
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 7.1e-24 114.8 134 43.3
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 7.1e-24 114.8 168 41.7
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 9.3e-24 114.4 133 48.9
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 1.2e-23 114.0 131 46.6
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 1.2e-23 114.0 170 38.8
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 1.2e-23 114.0 181 37.6
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 2.1e-23 113.2 136 45.6
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.1e-23 113.2 134 45.5
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 2.1e-23 113.2 134 46.3
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 2.7e-23 112.8 136 44.9
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 2.7e-23 112.8 136 44.9
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 2.7e-23 112.8 175 40.0
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 2.7e-23 112.8 138 44.9
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 3.5e-23 112.5 131 45.8
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 3.5e-23 112.5 172 40.1
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 4.6e-23 112.1 167 40.1
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 4.6e-23 112.1 197 40.1
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 4.6e-23 112.1 159 40.3
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 6.0e-23 111.7 137 44.5
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 7.8e-23 111.3 138 44.2
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 7.8e-23 111.3 168 41.1
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 7.8e-23 111.3 165 39.4
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 7.8e-23 111.3 143 44.8
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 1.0e-22 110.9 134 43.3
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 1.0e-22 110.9 134 43.3
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 1.0e-22 110.9 160 43.1
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 1.0e-22 110.9 180 40.0
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 1.3e-22 110.5 131 45.0
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 1.3e-22 110.5 171 38.6
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 1.7e-22 110.2 181 41.4
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 1.7e-22 110.2 165 38.8
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 1.7e-22 110.2 162 41.4
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 2.3e-22 109.8 125 48.8
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 3.0e-22 109.4 180 40.0
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 3.0e-22 109.4 158 42.4
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 3.0e-22 109.4 147 42.2
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 3.0e-22 109.4 179 40.2
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 3.9e-22 109.0 171 38.6
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 5.1e-22 108.6 168 41.7
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 5.1e-22 108.6 175 37.7
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 5.1e-22 108.6 158 41.8
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 6.6e-22 108.2 132 43.2
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 8.7e-22 107.8 172 40.1
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 8.7e-22 107.8 168 41.1
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 8.7e-22 107.8 134 47.0
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 1.1e-21 107.5 137 43.8
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 1.1e-21 107.5 168 41.1
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 1.5e-21 107.1 136 47.1
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 1.9e-21 106.7 143 46.9
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 1.9e-21 106.7 135 41.5
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 1.9e-21 106.7 135 41.5
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 1.9e-21 106.7 135 41.5
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 1.9e-21 106.7 158 43.0
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 2.5e-21 106.3 129 44.2
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 2.5e-21 106.3 151 41.7
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 2.5e-21 106.3 162 42.0
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 3.3e-21 105.9 134 43.3
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 3.3e-21 105.9 129 44.2
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 3.3e-21 105.9 170 40.0
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 3.3e-21 105.9 167 37.7
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 4.3e-21 105.5 164 39.6
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 4.3e-21 105.5 179 36.9
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 5.6e-21 105.1 165 40.6
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 9.6e-21 104.4 158 40.5
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 1.6e-20 103.6 162 38.9
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 1.6e-20 103.6 162 38.9
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 2.1e-20 103.2 144 39.6
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.1e-20 103.2 150 38.0
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.1e-20 103.2 150 38.0
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 3.6e-20 102.4 138 39.9
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 3.6e-20 102.4 134 43.3
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 3.6e-20 102.4 134 42.5
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 3.6e-20 102.4 140 40.0
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 3.6e-20 102.4 162 38.3
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 6.2e-20 101.7 132 43.2
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 6.2e-20 101.7 162 40.7
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 6.2e-20 101.7 162 40.7
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 6.2e-20 101.7 134 42.5
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 6.2e-20 101.7 171 38.0
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 8.1e-20 101.3 162 39.5
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 8.1e-20 101.3 127 44.9
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 1.1e-19 100.9 162 39.5
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 1.1e-19 100.9 135 40.0
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 2.4e-19 99.8 162 40.7
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 2.4e-19 99.8 162 40.7
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 2.4e-19 99.8 162 40.7
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 2.4e-19 99.8 143 40.6
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 4.0e-19 99.0 132 42.4
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 4.0e-19 99.0 165 38.8
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 5.3e-19 98.6 135 43.0
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 5.3e-19 98.6 132 43.9
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 6.9e-19 98.2 129 41.1
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 9.0e-19 97.8 168 33.9
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 4.5e-18 95.5 162 39.5
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 4.5e-18 95.5 167 35.9
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 9.9e-18 94.4 140 40.0
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 1.7e-17 93.6 152 37.5
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 6.4e-17 91.7 90 52.2
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 5.4e-16 88.6 140 40.7
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 2.7e-15 86.3 173 35.8
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 5.1e-14 82.0 94 44.7
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 5.1e-14 82.0 94 46.8
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 8.1e-12 74.7 99 42.4
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 1.8e-11 73.6 90 40.0
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 1.3e-09 67.4 80 42.5


User provided reference genes

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