Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03606 Striga asiatica HOM05D007695 ORTHO05D009675 3.8e-63 245.0 151 100.0
MSTRG.7074 Avicennia marina HOM05D007695 ORTHO05D009675 2.9e-39 165.6 154 75.3
Migut.M01534 Erythranthe guttata HOM05D007695 ORTHO05D009675 1.1e-38 163.7 164 59.1
Oeu034976.1 Olea europaea HOM05D000672 ORTHO05D009675 1.8e-33 146.4 148 61.5
SalBow8G0946 Salvia bowleyana HOM05D007695 ORTHO05D009675 9.1e-33 144.1 179 57.0
Hma1.2p1_0119F.1_g056770 Hydrangea macrophylla HOM05D007695 ORTHO05D009675 1.2e-29 133.7 109 67.9
GSVIVG01036789001 Vitis vinifera HOM05D007695 ORTHO05D009675 1.0e-28 130.6 151 52.3
PGSC0003DMG400030526 Solanum tuberosum HOM05D007695 ORTHO05D009675 3.0e-28 129.0 78 75.6
Dinv19595 Davidia involucrata HOM05D007695 ORTHO05D009675 3.9e-28 128.6 78 74.4
Gohir.A13G123700 Gossypium hirsutum HOM05D007695 ORTHO05D009675 3.9e-28 128.6 105 67.6
Cc05_g01290 Coffea canephora HOM05D007695 ORTHO05D009675 5.1e-28 128.3 74 81.1
Duzib213G0064 Durio zibethinus HOM05D007695 ORTHO05D009675 6.7e-28 127.9 86 72.1
vmacro09774 Vaccinium macrocarpon HOM05D007695 ORTHO05D009675 8.8e-28 127.5 83 68.7
ClCG09G022690 Citrullus lanatus HOM05D007695 ORTHO05D009675 3.3e-27 125.6 76 73.7
CsaV3_7G022890 Cucumis sativus L. HOM05D007695 ORTHO05D009675 3.3e-27 125.6 80 70.0
FAN21G0117 Fragaria x ananassa HOM05D007695 ORTHO05D009675 3.3e-27 125.6 78 71.8
CAN.G610.6 Capsicum annuum HOM05D007695 ORTHO05D009675 4.4e-27 125.2 150 59.3
FAN11G1768 Fragaria x ananassa HOM05D007695 ORTHO05D009675 4.4e-27 125.2 75 74.7
FAN25G3643 Fragaria x ananassa HOM05D007695 ORTHO05D009675 4.4e-27 125.2 75 74.7
Gohir.D13G127533 Gossypium hirsutum HOM05D007695 ORTHO05D009675 4.4e-27 125.2 80 71.2
Gorai.013G142800 Gossypium raimondii HOM05D007695 ORTHO05D009675 4.4e-27 125.2 80 71.2
Rhsim04G0004200 Rhododendron simsii HOM05D007695 ORTHO05D009675 4.4e-27 125.2 83 68.7
TWI32G1143 Tripterygium wilfordii HOM05D007695 ORTHO05D009675 4.4e-27 125.2 82 70.7
Actinidia37127 Actinidia chinensis HOM05D007695 ORTHO05D009675 5.7e-27 124.8 161 58.4
Duzib187G1742 Durio zibethinus HOM05D000001 ORTHO05D000003 5.7e-27 124.8 78 74.4
COL.COLO4_32235 Corchorus olitorius HOM05D007695 ORTHO05D009675 7.4e-27 124.4 74 74.3
Thecc.07G171400 Theobroma cacao HOM05D007695 ORTHO05D009675 7.4e-27 124.4 74 77.0
Nitab4.5_0007560g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 9.7e-27 124.0 79 72.2
Nitab4.5_0010557g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 9.7e-27 124.0 79 72.2
Peaxi162Scf00225g00098 Petunia axillaris HOM05D007695 ORTHO05D009675 2.2e-26 122.9 151 54.3
CSS0012508 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 2.8e-26 122.5 83 68.7
Aqoxy1G01977 Aquilegia oxysepala HOM05D007695 ORTHO05D009675 3.7e-26 122.1 83 67.5
Sopen05g004520 Solanum pennellii HOM05D007695 ORTHO05D009675 3.7e-26 122.1 151 60.9
FvH4_3g15210 Fragaria vesca HOM05D007695 ORTHO05D009675 4.8e-26 121.7 75 73.3
Glyma.08G167800 Glycine max HOM05D007695 ORTHO05D009675 6.3e-26 121.3 77 70.1
Cfa010552 Carpinus fangiana HOM05D007695 ORTHO05D009675 8.2e-26 120.9 78 71.8
Solyc05g008750.3 Solanum lycopersicum HOM05D007695 ORTHO05D009675 8.2e-26 120.9 150 60.0
CiPaw.11G064100 Carya illinoinensis HOM05D007695 ORTHO05D009675 1.4e-25 120.2 155 52.3
FAN16G2644 Fragaria x ananassa HOM05D007695 ORTHO05D009675 1.4e-25 120.2 75 72.0
MD05G1224500 Malus domestica HOM05D007695 ORTHO05D009675 1.4e-25 120.2 80 66.2
Sed0008622 Sechium edule HOM05D007695 ORTHO05D009675 1.4e-25 120.2 77 67.5
QL04p080880 Quercus lobata HOM05D007695 ORTHO05D009675 1.8e-25 119.8 80 66.2
RcHm_v2.0_Chr5g0025651 Rosa chinensis HOM05D007695 ORTHO05D009675 2.4e-25 119.4 75 70.7
Potri.007G068500 Populus trichocarpa HOM05D007695 ORTHO05D009675 4.1e-25 118.6 79 68.4
Glyma.15G259802 Glycine max HOM05D007695 ORTHO05D009675 6.9e-25 117.9 150 59.3
Lsat_1_v5_gn_7_110340 Lactuca sativa HOM05D007695 ORTHO05D009675 6.9e-25 117.9 81 65.4
Lalb_Chr25g0284741 Lupinus albus HOM05D007695 ORTHO05D009675 6.9e-25 117.9 77 68.8
Psat1g013560 Pisum sativum HOM05D007695 ORTHO05D009675 6.9e-25 117.9 77 70.1
Sc09g0007600 Simmondsia chinensis HOM05D007695 ORTHO05D009675 9.1e-25 117.5 83 63.9
Ciclev10006169m.g Citrus clementina HOM05D007695 ORTHO05D009675 1.2e-24 117.1 80 63.8
Eucgr.F04454 Eucalyptus grandis HOM05D007695 ORTHO05D009675 1.2e-24 117.1 77 71.4
Lj3g0020370 Lotus japonicus HOM05D007695 ORTHO05D009675 1.2e-24 117.1 77 66.2
MD10G1206200 Malus domestica HOM05D007695 ORTHO05D009675 1.2e-24 117.1 134 51.5
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 2.0e-24 116.3 70 74.3
TPR.G33812 Trifolium pratense HOM05D007695 ORTHO05D009675 2.6e-24 115.9 74 73.0
CANSAT80G0100 Cannabis sativa HOM05D007695 ORTHO05D009675 4.5e-24 115.2 74 64.9
DCAR_016834 Daucus carota HOM05D007695 ORTHO05D009675 4.5e-24 115.2 141 51.1
VMungo0147G0001 Vigna mungo HOM05D007695 ORTHO05D009675 7.7e-24 114.4 73 69.9
Os02g0170200 Oryza sativa ssp. japonica HOM05D007695 ORTHO05D009675 1.0e-23 114.0 72 72.2
Potri.005G095700 Populus trichocarpa HOM05D007695 ORTHO05D009675 1.3e-23 113.6 71 69.0
Sabra05G0078900 Salix brachista HOM05D007695 ORTHO05D009675 2.9e-23 112.5 103 66.0
Zm00001eb233100 Zea mays HOM05D007695 ORTHO05D009675 3.8e-23 112.1 72 69.4
HPP92_016681 Vanilla planifolia HOM05D007695 ORTHO05D009675 6.5e-23 111.3 79 64.6
EL10Ac2g03268 Beta vulgaris HOM05D007695 ORTHO05D009675 1.1e-22 110.5 155 57.4
BcaC08g47483 Brassica carinata HOM05D007695 ORTHO05D009675 1.1e-22 110.5 79 64.6
A07p44310 Brassica napus HOM05D007695 ORTHO05D009675 1.1e-22 110.5 79 64.6
C06p53060 Brassica napus HOM05D007695 ORTHO05D009675 1.1e-22 110.5 79 64.6
BolC6t40323H Brassica oleracea HOM05D007695 ORTHO05D009675 1.1e-22 110.5 79 64.6
BraA07t31939Z Brassica rapa HOM05D007695 ORTHO05D009675 1.1e-22 110.5 79 64.6
PGR031G0168 Punica granatum HOM05D007695 ORTHO05D009675 1.1e-22 110.5 135 54.1
ECA236G2936 Erigeron canadensis HOM05D007695 ORTHO05D009675 1.4e-22 110.2 81 60.5
unitig_748.g7621 Utricularia gibba HOM05D000001 ORTHO05D000003 1.4e-22 110.2 94 54.3
HanXRQChr15g0494421 Helianthus annuus HOM05D007695 ORTHO05D009675 1.9e-22 109.8 106 60.4
Carub.0002s2607 Capsella rubella HOM05D007695 ORTHO05D009675 2.5e-22 109.4 80 63.8
CARHR072850 Cardamine hirsuta HOM05D007695 ORTHO05D009675 2.5e-22 109.4 78 65.4
Aa31LG4G1810 Aethionema arabicum HOM05D007695 ORTHO05D009675 5.5e-22 108.2 103 54.4
AL2G39670 Arabidopsis lyrata HOM05D007695 ORTHO05D009675 5.5e-22 108.2 78 65.4
Sp5g34250 Schrenkiella parvula HOM05D007695 ORTHO05D009675 7.2e-22 107.8 73 64.4
BcaB02g08673 Brassica carinata HOM05D007695 ORTHO05D009675 1.2e-21 107.1 159 51.6
Hund12430 Selenicereus undatus HOM05D007695 ORTHO05D009675 1.6e-21 106.7 66 75.8
AUR62037645 Chenopodium quinoa HOM05D007695 ORTHO05D009675 2.7e-21 105.9 150 53.3
THA.LOC104808131 Tarenaya hassleriana HOM05D007695 ORTHO05D009675 2.7e-21 105.9 73 67.1
PSO384G4287 Papaver somniferum HOM05D007695 ORTHO05D009675 4.7e-21 105.1 72 62.5
PSO339G5408 Papaver somniferum HOM05D007695 ORTHO05D009675 1.0e-20 104.0 72 61.1
AT1G79200 Arabidopsis thaliana HOM05D007695 ORTHO05D009675 1.4e-20 103.6 142 52.1
Thhalv10019257m.g Eutrema salsugineum HOM05D007695 ORTHO05D009675 2.3e-20 102.8 138 50.0
SEGI_05035 Sequoiadendron giganteum HOM05D007695 ORTHO05D009675 1.7e-18 96.7 74 56.8
Ah.16g106010 Amaranthus hybridus HOM05D007695 ORTHO05D009675 4.8e-18 95.1 61 75.4
Pp3c22_2020 Physcomitrium patens HOM05D007695 ORTHO05D009675 7.0e-17 91.3 75 54.7
Mapoly0004s0265 Marchantia polymorpha HOM05D007695 ORTHO05D009675 1.2e-16 90.5 107 43.0
Peaxi162Scf00225g00095 Petunia axillaris HOM05D007695 ORTHO05D009675 7.2e-14 81.3 54 68.5
CBR_g3127 Chara braunii HOM05D000017 ORTHO05D000013 4.7e-13 78.6 77 49.4
SMO145G0213 Selaginella moellendorffii HOM05D007695 ORTHO05D009675 1.7e-10 70.1 59 49.2
Cre06.g255250 Chlamydomonas reinhardtii HOM05D007695 ORTHO05D009675 4.8e-10 68.6 81 39.5
Phvul.005G059400 Phaseolus vulgaris HOM05D007695 ORTHO05D009675 5.0e-07 58.5 128 45.3


User provided reference genes

Program Settings