Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 6.6e-207 723.8 362 100.0
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 4.7e-144 515.0 366 71.0
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 1.4e-140 503.4 356 70.8
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 2.9e-130 469.2 358 65.6
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 1.1e-129 467.2 361 64.5
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 5.6e-129 464.9 360 68.6
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 5.2e-127 458.4 328 66.8
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 2.6e-126 456.1 352 63.6
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 3.4e-126 455.7 337 66.2
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 4.4e-126 455.3 334 66.8
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 6.4e-125 451.4 358 64.8
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 8.3e-125 451.1 357 64.1
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 7.0e-124 448.0 341 64.2
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 2.0e-123 446.4 358 63.1
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 2.7e-123 446.0 344 64.2
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 5.9e-123 444.9 333 64.0
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 1.3e-122 443.7 329 65.3
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 4.3e-121 438.7 335 62.7
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 5.6e-121 438.3 346 64.7
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 5.6e-121 438.3 334 62.9
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 9.5e-121 437.6 361 60.4
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 3.6e-120 435.6 372 58.9
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 8.0e-120 434.5 341 62.8
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 1.8e-119 433.3 346 62.7
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 4.0e-119 432.2 354 62.1
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 6.8e-119 431.4 357 62.2
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 1.2e-118 430.6 340 63.2
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 3.4e-118 429.1 340 62.9
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 3.4e-118 429.1 329 64.4
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 4.4e-118 428.7 330 63.3
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 4.9e-117 425.2 359 59.3
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 6.4e-117 424.9 340 62.6
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 8.3e-117 424.5 336 64.3
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.1e-116 424.1 360 60.0
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.4e-116 423.7 335 63.6
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 1.9e-116 423.3 352 60.2
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 4.1e-116 422.2 354 59.3
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 5.4e-116 421.8 328 63.4
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.6e-115 420.2 367 57.5
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 2.7e-115 419.5 333 63.1
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.5e-115 419.1 341 62.5
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.3e-114 417.2 326 62.3
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 2.3e-114 416.4 326 62.0
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 3.0e-114 416.0 331 62.8
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 3.0e-114 416.0 327 61.8
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 3.9e-114 415.6 334 61.7
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 6.6e-114 414.8 331 61.6
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 1.1e-113 414.1 330 61.8
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 1.5e-113 413.7 354 58.8
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 1.9e-113 413.3 348 59.2
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 5.6e-113 411.8 331 62.2
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 9.5e-113 411.0 364 56.6
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 1.6e-112 410.2 341 61.3
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 4.7e-112 408.7 340 60.9
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 6.2e-112 408.3 340 60.9
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 1.1e-111 407.5 328 62.2
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 2.3e-111 406.4 341 60.1
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 2.3e-111 406.4 346 59.2
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 2.2e-109 399.8 333 59.8
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 3.7e-109 399.1 344 58.4
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 6.4e-109 398.3 332 59.6
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 8.3e-109 397.9 327 59.0
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 8.3e-109 397.9 342 57.3
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 1.4e-108 397.1 333 59.5
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 3.2e-108 396.0 352 58.2
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 5.4e-108 395.2 331 58.3
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 5.4e-108 395.2 335 58.8
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 4.6e-107 392.1 329 59.0
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 7.8e-107 391.3 325 59.4
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.7e-106 390.2 317 62.8
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.7e-106 390.2 343 57.7
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 2.3e-106 389.8 328 59.1
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 6.6e-106 388.3 328 58.5
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 8.6e-106 387.9 343 57.7
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.9e-105 386.7 327 59.3
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 3.3e-105 386.0 327 59.0
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 3.3e-105 386.0 345 56.5
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 5.6e-105 385.2 363 54.0
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 9.5e-105 384.4 340 55.6
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 9.5e-105 384.4 340 55.9
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 3.6e-104 382.5 328 58.5
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 3.6e-104 382.5 310 59.7
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 6.8e-103 378.3 321 58.9
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.0e-102 376.7 321 60.1
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 3.4e-102 375.9 373 54.7
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 5.8e-102 375.2 329 56.5
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 5.8e-102 375.2 303 59.1
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 9.9e-102 374.4 286 62.9
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 4.9e-101 372.1 287 64.5
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.4e-100 369.8 341 58.1
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 6.2e-96 355.1 250 67.6
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.7e-93 347.1 363 51.2
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 1.1e-92 344.4 360 53.1
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 1.1e-89 334.3 343 53.1
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 6.4e-85 318.5 262 61.1
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 1.4e-84 317.4 242 60.7
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 8.7e-82 308.1 286 52.1
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.9e-81 307.0 325 49.5
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 1.1e-79 301.2 331 46.2
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 3.2e-76 289.7 242 63.2
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 6.7e-74 282.0 255 53.7
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 1.1e-73 281.2 231 58.4
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 9.6e-73 278.1 325 46.8
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 4.8e-72 275.8 445 37.5
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 6.2e-72 275.4 253 56.1
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.4e-71 273.5 314 48.7
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 1.5e-65 254.2 288 51.0
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 7.4e-65 251.9 287 48.8
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.8e-64 250.0 215 60.9
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 6.3e-64 248.8 251 51.8
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 2.5e-60 236.9 233 53.2
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 4.2e-60 236.1 223 52.5
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 1.7e-56 224.2 345 39.1
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 7.4e-49 198.7 159 62.9
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 9.7e-49 198.4 372 35.2
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 3.8e-45 186.4 165 57.0
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 3.9e-42 176.4 124 66.9
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.5e-41 174.5 491 28.5
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 3.1e-39 166.8 414 32.9
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 1.6e-38 164.5 128 60.9
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 1.3e-37 161.4 130 56.2
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 1.2e-35 154.8 174 50.0
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 5.7e-33 146.0 109 67.0
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 9.7e-33 145.2 125 52.8
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 1.3e-24 118.2 82 65.9
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.4e-23 114.8 85 63.5
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 3.8e-21 106.7 127 49.6
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 1.4e-18 98.2 93 57.0
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 3.0e-18 97.1 63 71.4
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 7.3e-12 75.9 235 29.8
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 9.8e-09 65.5 71 52.1
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.3e-08 65.1 120 38.3


User provided reference genes

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