Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03534 Striga asiatica HOM05D009327 ORTHO05D011487 1.4e-67 259.6 138 100.0
Migut.M01593 Erythranthe guttata HOM05D009327 ORTHO05D011487 8.6e-22 107.5 124 58.9
Oeu005541.1 Olea europaea HOM05D009327 ORTHO05D011487 7.3e-13 77.8 94 53.2
Lsat_1_v5_gn_9_89420 Lactuca sativa HOM05D009327 ORTHO05D011487 6.2e-12 74.7 124 40.3
COL.COLO4_07769 Corchorus olitorius HOM05D009327 ORTHO05D011487 2.3e-11 72.8 108 48.1
MD03G1040200 Malus domestica HOM05D009327 ORTHO05D011487 2.3e-11 72.8 126 41.3
Thecc.07G003900 Theobroma cacao HOM05D009327 ORTHO05D011487 1.5e-10 70.1 117 41.0
Nitab4.5_0024826g0010 Nicotiana tabacum HOM05D009327 ORTHO05D011487 3.4e-10 68.9 89 49.4
Nitab4.5_0000152g0160 Nicotiana tabacum HOM05D009327 ORTHO05D011487 7.5e-10 67.8 89 49.4
Haze_09900 Corylus avellana HOM05D009327 ORTHO05D011487 1.3e-09 67.0 101 46.5
Prupe.6G032500 Prunus persica HOM05D009327 ORTHO05D011487 2.9e-09 65.9 113 42.5
Peaxi162Scf00232g00417 Petunia axillaris HOM05D009327 ORTHO05D011487 8.3e-09 64.3 95 50.5
Hma1.2p1_0193F.1_g084170 Hydrangea macrophylla HOM05D009327 ORTHO05D011487 1.9e-08 63.2 126 39.7
Dinv10378 Davidia involucrata HOM05D000872 ORTHO05D000777 3.2e-08 62.4 110 44.5
ECA240G0968 Erigeron canadensis HOM05D009327 ORTHO05D011487 1.6e-07 60.1 117 34.2
ATR0751G022 Amborella trichopoda HOM05D009327 ORTHO05D011487 2.7e-07 59.3 82 45.1
BcaC01g04525 Brassica carinata HOM05D000805 ORTHO05D000624 1.7e-06 56.6 102 44.1
C03p39560 Brassica napus HOM05D000001 ORTHO05D000003 1.7e-06 56.6 102 44.1
BolC3t16223H Brassica oleracea HOM05D000001 ORTHO05D000003 1.7e-06 56.6 102 44.1
CAN.G623.56 Capsicum annuum HOM05D009327 ORTHO05D011487 1.7e-06 56.6 108 39.8
Carub.0003s0050 Capsella rubella HOM05D000805 ORTHO05D000624 2.3e-06 56.2 118 40.7
Sp3g00480 Schrenkiella parvula HOM05D000805 ORTHO05D000624 2.3e-06 56.2 102 44.1
Cfa007378 Carpinus fangiana HOM05D000805 ORTHO05D000624 3.0e-06 55.8 101 41.6
Cpa.g.sc1077.3 Carica papaya HOM05D009327 ORTHO05D011487 3.9e-06 55.5 89 44.9
Haze_14732 Corylus avellana HOM05D000805 ORTHO05D000624 5.1e-06 55.1 82 50.0
A03p32480 Brassica napus HOM05D000001 ORTHO05D000003 8.6e-06 54.3 79 49.4
BraA03t12417Z Brassica rapa HOM05D000001 ORTHO05D000003 8.6e-06 54.3 79 49.4
Ciclev10010352m.g Citrus clementina HOM05D009327 ORTHO05D011487 8.6e-06 54.3 82 46.3


User provided reference genes

Program Settings