Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 1.9e-68 262.3 127 100.0
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 7.5e-65 250.4 127 93.7
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 4.9e-64 247.7 127 92.9
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 4.1e-63 244.6 127 89.8
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 9.2e-63 243.4 127 91.3
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 2.1e-62 242.3 127 89.0
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.7e-62 241.9 127 88.2
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 2.7e-62 241.9 126 89.7
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 6.0e-62 240.7 127 88.2
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.0e-61 240.0 127 89.0
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.3e-61 239.6 123 89.4
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 2.3e-61 238.8 127 87.4
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 5.1e-61 237.7 127 86.6
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 5.1e-61 237.7 127 85.8
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 5.1e-61 237.7 127 87.4
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 5.1e-61 237.7 127 86.6
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 6.6e-61 237.3 127 87.4
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 6.6e-61 237.3 127 88.2
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 8.6e-61 236.9 126 86.5
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 8.6e-61 236.9 127 85.8
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 1.1e-60 236.5 125 86.4
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 1.5e-60 236.1 125 87.2
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.5e-60 236.1 125 86.4
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 1.5e-60 236.1 127 85.0
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.9e-60 235.7 125 85.6
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.9e-60 235.7 125 85.6
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 1.9e-60 235.7 127 85.0
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.9e-60 235.7 127 85.8
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 3.3e-60 235.0 125 84.8
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 3.3e-60 235.0 123 87.8
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 3.3e-60 235.0 127 85.0
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 3.3e-60 235.0 125 84.8
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 4.3e-60 234.6 127 86.6
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.3e-60 234.6 127 85.0
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 4.3e-60 234.6 126 85.7
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 4.3e-60 234.6 127 85.8
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 4.3e-60 234.6 123 86.2
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 5.6e-60 234.2 126 87.3
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.6e-60 234.2 125 84.8
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 7.3e-60 233.8 125 87.2
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 7.3e-60 233.8 127 84.3
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 9.5e-60 233.4 125 84.0
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 1.6e-59 232.6 127 85.0
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 2.1e-59 232.3 127 85.8
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 2.1e-59 232.3 126 84.9
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 2.1e-59 232.3 127 86.6
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.1e-59 232.3 127 85.0
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 2.8e-59 231.9 127 83.5
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 3.6e-59 231.5 125 86.4
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 3.6e-59 231.5 125 84.8
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 3.6e-59 231.5 127 84.3
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 4.7e-59 231.1 125 84.8
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 6.2e-59 230.7 125 84.0
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 85.8
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 85.8
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 85.8
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 85.8
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 85.8
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 8.1e-59 230.3 125 85.6
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 2.4e-58 228.8 127 83.5
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 4.0e-58 228.0 123 84.6
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 4.0e-58 228.0 127 82.7
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 5.2e-58 227.6 121 86.8
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 5.2e-58 227.6 121 86.8
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 6.8e-58 227.3 128 85.2
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 8.9e-58 226.9 126 82.5
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 8.9e-58 226.9 127 82.7
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 8.9e-58 226.9 126 83.3
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 8.9e-58 226.9 126 81.0
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 1.2e-57 226.5 127 83.5
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 1.2e-57 226.5 123 84.6
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 1.2e-57 226.5 123 83.7
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 1.2e-57 226.5 125 82.4
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 1.5e-57 226.1 123 85.4
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 1.5e-57 226.1 127 82.7
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 2.0e-57 225.7 125 84.8
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 2.0e-57 225.7 123 83.7
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 2.6e-57 225.3 126 81.0
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 3.4e-57 224.9 126 83.3
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 3.4e-57 224.9 125 84.0
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 4.4e-57 224.6 126 81.7
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 4.4e-57 224.6 123 84.6
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 5.8e-57 224.2 126 82.5
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 5.8e-57 224.2 127 83.5
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 7.6e-57 223.8 125 83.2
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 7.6e-57 223.8 125 83.2
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 7.6e-57 223.8 121 86.8
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 7.6e-57 223.8 123 82.9
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 9.9e-57 223.4 125 84.0
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.3e-56 223.0 126 82.5
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.3e-56 223.0 126 82.5
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.3e-56 223.0 126 82.5
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 1.3e-56 223.0 123 82.9
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.3e-56 223.0 126 82.5
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 1.3e-56 223.0 125 80.0
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 1.7e-56 222.6 123 82.9
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 2.2e-56 222.2 128 78.9
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.2e-56 222.2 123 81.3
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 2.9e-56 221.9 126 81.0
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 3.8e-56 221.5 123 85.4
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 8.4e-56 220.3 123 83.7
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 8.4e-56 220.3 126 79.4
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 1.4e-55 219.5 123 82.1
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.4e-55 219.5 115 86.1
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.4e-55 219.5 126 81.7
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 2.4e-55 218.8 123 81.3
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 3.2e-55 218.4 123 78.9
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 3.2e-55 218.4 126 81.0
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 7.1e-55 217.2 123 80.5
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 9.2e-55 216.9 122 78.7
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 81.3
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 1.2e-54 216.5 128 81.2
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 1.6e-54 216.1 127 78.7
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 2.7e-54 215.3 123 80.5
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 3.5e-54 214.9 126 78.6
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 4.6e-54 214.5 115 81.7
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 6.0e-54 214.2 123 81.3
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 6.0e-54 214.2 125 77.6
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 1.0e-53 213.4 123 79.7
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 1.7e-53 212.6 123 79.7
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 7.3e-52 207.2 125 76.8
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.2e-51 206.5 125 77.6
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 2.1e-51 205.7 118 80.5
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 3.6e-51 204.9 112 83.9
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 4.7e-51 204.5 110 86.4
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 6.2e-51 204.1 112 83.9
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 8.1e-51 203.8 107 86.0
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 2.4e-50 202.2 107 86.9
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 3.1e-50 201.8 112 83.0
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 2.6e-49 198.7 134 76.9
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 2.6e-49 198.7 115 80.0
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 4.9e-48 194.5 111 82.9
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 6.4e-48 194.1 101 90.1
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.4e-47 193.0 103 85.4
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 5.4e-47 191.0 126 71.4
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 2.1e-46 189.1 124 69.4
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 4.6e-46 188.0 124 72.6
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.9e-44 182.6 100 83.0
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.3e-44 181.8 100 82.0
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 9.6e-44 180.3 93 90.3
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 5.3e-42 174.5 102 82.4
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 2.6e-41 172.2 120 66.7
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 8.4e-40 167.2 98 79.6
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 7.1e-39 164.1 88 84.1
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 9.3e-39 163.7 124 61.3
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 4.6e-38 161.4 127 59.1
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 6.0e-38 161.0 102 73.5
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 3.0e-37 158.7 131 62.6
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.4e-33 145.2 69 94.2
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 1.4e-31 139.8 120 55.0
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 5.5e-31 137.9 126 56.3
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 3.5e-30 135.2 122 54.1
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.1e-27 125.9 114 58.8
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 6.2e-27 124.4 108 59.3
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.4e-26 123.2 57 93.0
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.6e-22 109.8 62 82.3
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 2.1e-22 109.4 82 54.9
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.7e-22 109.0 129 46.5
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 1.1e-20 103.6 106 48.1
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 4.3e-20 101.7 79 54.4
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.8e-16 88.6 47 87.2
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 3.3e-12 75.5 35 97.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.0e-09 66.2 32 87.5
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 2.2e-08 62.8 35 77.1
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 3.8e-08 62.0 33 78.8


User provided reference genes

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