Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold79G25602 Striga asiatica HOM05D004596 ORTHO05D005853 5.2e-248 860.9 545 100.0
Migut.N00215 Erythranthe guttata HOM05D004596 ORTHO05D005853 5.2e-131 472.2 552 61.1
MSTRG.4066 Avicennia marina HOM05D004596 ORTHO05D005853 4.4e-130 469.2 554 63.9
Oeu064241.3 Olea europaea HOM05D004596 ORTHO05D005853 4.2e-96 356.3 725 42.1
Dinv44581 Davidia involucrata HOM05D004596 ORTHO05D005853 2.1e-95 354.0 565 50.4
Hma1.2p1_0549F.1_g177070 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 2.5e-88 330.5 527 50.3
Hma1.2p1_0549F.1_g177080 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 7.2e-88 328.9 531 49.7
CSS0040136 Camellia sinensis var. sinensis HOM05D004596 ORTHO05D005853 2.7e-87 327.0 562 48.6
Cc03_g04360 Coffea canephora HOM05D004596 ORTHO05D005853 3.3e-85 320.1 562 47.5
Rhsim04G0196700 Rhododendron simsii HOM05D004596 ORTHO05D005853 4.1e-83 313.2 543 48.6
GSVIVG01018052001 Vitis vinifera HOM05D004596 ORTHO05D005853 9.1e-83 312.0 545 47.5
QL06p000822 Quercus lobata HOM05D004596 ORTHO05D005853 1.2e-82 311.6 558 47.3
Potri.008G158600 Populus trichocarpa HOM05D004596 ORTHO05D005853 8.5e-81 305.4 544 50.4
TAR362G0583 Trochodendron aralioides HOM05D004596 ORTHO05D005853 1.9e-80 304.3 568 49.8
Peaxi162Scf00316g00026 Petunia axillaris HOM05D004596 ORTHO05D005853 3.2e-80 303.5 534 49.1
Sopen09g031650 Solanum pennellii HOM05D004596 ORTHO05D005853 1.2e-79 301.6 536 47.9
Nitab4.5_0002652g0030 Nicotiana tabacum HOM05D004596 ORTHO05D005853 6.1e-79 299.3 551 47.9
Sabra08G0120900 Salix brachista HOM05D004596 ORTHO05D005853 7.9e-79 298.9 582 52.6
Solyc09g082800.3 Solanum lycopersicum HOM05D004596 ORTHO05D005853 1.4e-78 298.1 536 47.8
PGSC0003DMG400030169 Solanum tuberosum HOM05D004596 ORTHO05D005853 6.7e-78 295.8 536 47.6
CAN.G1435.8 Capsicum annuum HOM05D004596 ORTHO05D005853 2.0e-77 294.3 540 47.6
Nitab4.5_0000224g0010 Nicotiana tabacum HOM05D004596 ORTHO05D005853 2.6e-77 293.9 594 44.8
Lsat_1_v5_gn_5_103320 Lactuca sativa HOM05D004596 ORTHO05D005853 5.7e-77 292.7 550 49.6
Cfa008428 Carpinus fangiana HOM05D004596 ORTHO05D005853 6.3e-76 289.3 571 45.4
MELO3C006495.2 Cucumis melo HOM05D004596 ORTHO05D005853 6.3e-76 289.3 571 45.9
ClCG05G004810 Citrullus lanatus HOM05D004596 ORTHO05D005853 8.2e-76 288.9 571 44.7
Sabra10G0061500 Salix brachista HOM05D004596 ORTHO05D005853 8.2e-76 288.9 576 44.1
CsaV3_3G012850 Cucumis sativus L. HOM05D004596 ORTHO05D005853 2.4e-75 287.3 567 44.1
PGR142G3885 Punica granatum HOM05D004596 ORTHO05D005853 7.0e-75 285.8 546 46.5
TAR633G0587 Trochodendron aralioides HOM05D004596 ORTHO05D005853 1.2e-74 285.0 558 47.7
Potri.010G081400 Populus trichocarpa HOM05D004596 ORTHO05D005853 2.2e-73 280.8 556 46.2
DCAR_024187 Daucus carota HOM05D004596 ORTHO05D005853 1.1e-72 278.5 555 45.9
Manes.15G033300 Manihot esculenta HOM05D004596 ORTHO05D005853 9.4e-72 275.4 534 53.6
Sed0001129 Sechium edule HOM05D004596 ORTHO05D005853 8.0e-71 272.3 525 45.0
Ca_20830_v3 Cicer arietinum L. HOM05D004596 ORTHO05D005853 3.9e-70 270.0 548 46.5
vmacro08381 Vaccinium macrocarpon HOM05D004596 ORTHO05D005853 6.7e-70 269.2 538 45.2
Haze_11239 Corylus avellana HOM05D004596 ORTHO05D005853 1.1e-69 268.5 573 42.4
Actinidia04506 Actinidia chinensis HOM05D004596 ORTHO05D005853 1.5e-69 268.1 551 44.5
VMungo0720G1744 Vigna mungo HOM05D004596 ORTHO05D005853 1.5e-69 268.1 560 43.9
Phvul.007G062700 Phaseolus vulgaris HOM05D004596 ORTHO05D005853 3.3e-69 266.9 545 44.4
TPR.G29898 Trifolium pratense HOM05D004596 ORTHO05D005853 2.8e-68 263.8 588 43.5
TWI73G0280 Tripterygium wilfordii HOM05D004596 ORTHO05D005853 2.6e-66 257.3 587 41.7
Ciclev10004189m.g Citrus clementina HOM05D004596 ORTHO05D005853 7.7e-66 255.8 564 45.7
Glyma.20G151300 Glycine max HOM05D004596 ORTHO05D005853 2.2e-65 254.2 565 42.7
Lj5g0008006 Lotus japonicus HOM05D004596 ORTHO05D005853 2.9e-65 253.8 552 43.3
Gohir.D10G149100 Gossypium hirsutum HOM05D004596 ORTHO05D005853 8.5e-65 252.3 525 45.7
Lalb_Chr02g0140731 Lupinus albus HOM05D004596 ORTHO05D005853 8.5e-65 252.3 559 43.6
Glyma.10G243000 Glycine max HOM05D004596 ORTHO05D005853 1.9e-64 251.1 551 42.5
Gorai.011G166400 Gossypium raimondii HOM05D004596 ORTHO05D005853 9.4e-64 248.8 528 45.6
Thecc.04G239700 Theobroma cacao HOM05D004596 ORTHO05D005853 1.6e-63 248.1 529 43.7
Prupe.1G022600 Prunus persica HOM05D004596 ORTHO05D005853 2.1e-63 247.7 579 42.8
MBI11_g37065_MAGBIO Magnolia biondii HOM05D004596 ORTHO05D005853 3.6e-63 246.9 584 40.6
CiPaw.01G194700 Carya illinoinensis HOM05D004596 ORTHO05D005853 1.4e-62 245.0 425 51.5
CANSAT78G0708 Cannabis sativa HOM05D004596 ORTHO05D005853 1.5e-61 241.5 567 45.0
Duzib151G0659 Durio zibethinus HOM05D004596 ORTHO05D005853 2.2e-60 237.7 525 44.4
Cpa.g.sc44.129 Carica papaya HOM05D004596 ORTHO05D005853 2.8e-60 237.3 542 46.1
Lj3C724G8 Lonicera japonica HOM05D004596 ORTHO05D005853 4.8e-60 236.5 562 41.6
Aqoxy2G03471 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 6.3e-60 236.1 557 40.9
MD16G1200600 Malus domestica HOM05D004596 ORTHO05D005853 5.3e-59 233.0 524 43.1
Hund20642 Selenicereus undatus HOM05D004596 ORTHO05D005853 7.0e-59 232.6 524 34.9
Hma1.2p1_1311F.1_g274870 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 9.1e-59 232.3 516 35.3
FvH4_4g01620 Fragaria vesca HOM05D004596 ORTHO05D005853 2.2e-57 227.6 566 42.8
HanXRQChr10g0294771 Helianthus annuus HOM05D004596 ORTHO05D005853 3.8e-57 226.9 521 45.7
ATR0665G133 Amborella trichopoda HOM05D004596 ORTHO05D005853 6.5e-57 226.1 585 40.2
AUR62038647 Chenopodium quinoa HOM05D004596 ORTHO05D005853 4.2e-56 223.4 557 41.1
Medtr4g068740 Medicago truncatula HOM05D004596 ORTHO05D005853 4.2e-56 223.4 548 42.5
Ah.13g071800 Amaranthus hybridus HOM05D004596 ORTHO05D005853 1.2e-55 221.9 545 41.8
MD13G1201100 Malus domestica HOM05D004596 ORTHO05D005853 2.7e-55 220.7 567 41.1
AUR62042985 Chenopodium quinoa HOM05D004596 ORTHO05D005853 1.0e-54 218.8 532 42.1
Nn6g34173 Nelumbo nucifera HOM05D004596 ORTHO05D005853 3.0e-54 217.2 534 41.8
Eucgr.B00983 Eucalyptus grandis HOM05D004596 ORTHO05D005853 8.8e-54 215.7 520 46.3
AL1G13810 Arabidopsis lyrata HOM05D004596 ORTHO05D005853 2.0e-53 214.5 543 43.3
Carub.0001s0340 Capsella rubella HOM05D004596 ORTHO05D005853 2.0e-53 214.5 518 43.4
FAN12G2122 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.6e-53 214.2 566 41.9
SGA_v2.0_scaffold2G01030 Striga asiatica HOM05D004596 ORTHO05D005853 3.4e-53 213.8 147 76.9
FAN22G0929 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.2e-52 211.1 536 42.7
Actinidia40113 Actinidia chinensis HOM05D004596 ORTHO05D005853 2.8e-52 210.7 319 44.5
EL10Ac3g06528 Beta vulgaris HOM05D004596 ORTHO05D005853 3.7e-52 210.3 529 42.2
Psat7g206760 Pisum sativum HOM05D004596 ORTHO05D005853 8.3e-52 209.1 565 42.3
THA.LOC104826066 Tarenaya hassleriana HOM05D004596 ORTHO05D005853 1.1e-51 208.8 528 41.5
arahy.Tifrunner.gnm1.ann1.B8VWLB Arachis hypogaea HOM05D004596 ORTHO05D005853 1.4e-51 208.4 551 40.5
FAN17G0661 Fragaria x ananassa HOM05D004596 ORTHO05D005853 1.4e-51 208.4 532 43.6
arahy.Tifrunner.gnm1.ann1.0IB5VB Arachis hypogaea HOM05D004596 ORTHO05D005853 1.8e-51 208.0 551 40.3
ECA234G3873 Erigeron canadensis HOM05D004596 ORTHO05D005853 2.4e-51 207.6 525 41.7
RcHm_v2.0_Chr4g0388191 Rosa chinensis HOM05D004596 ORTHO05D005853 3.1e-51 207.2 570 41.8
CARHR003540 Cardamine hirsuta HOM05D004596 ORTHO05D005853 1.0e-49 202.2 565 40.0
Dinv14050 Davidia involucrata HOM05D004596 ORTHO05D005853 1.3e-49 201.8 390 50.0
PSO210G2132 Papaver somniferum HOM05D004596 ORTHO05D005853 3.3e-48 197.2 601 37.6
Sp1g03030 Schrenkiella parvula HOM05D004596 ORTHO05D005853 4.2e-48 196.8 557 41.8
HPP92_023540 Vanilla planifolia HOM05D004596 ORTHO05D005853 4.2e-48 196.8 546 38.6
Thecc.08G085900 Theobroma cacao HOM05D004596 ORTHO05D005853 5.5e-48 196.4 522 43.9
AT1G04210 Arabidopsis thaliana HOM05D004596 ORTHO05D005853 7.2e-48 196.1 522 44.1
Thhalv10006614m.g Eutrema salsugineum HOM05D004596 ORTHO05D005853 7.2e-48 196.1 572 41.8
PSO461G0024 Papaver somniferum HOM05D004596 ORTHO05D005853 1.4e-46 191.8 601 37.3
A10p02640 Brassica napus HOM05D004596 ORTHO05D005853 3.0e-46 190.7 516 42.4
BolC5t29021H Brassica oleracea HOM05D004596 ORTHO05D005853 1.2e-45 188.7 518 42.3
BraA10t42531Z Brassica rapa HOM05D004596 ORTHO05D005853 1.5e-45 188.3 516 42.2
BcaC07g42199 Brassica carinata HOM05D004596 ORTHO05D005853 2.6e-45 187.6 546 41.4
C05p02420 Brassica napus HOM05D004596 ORTHO05D005853 3.4e-45 187.2 518 41.9
COL.COLO4_21575 Corchorus olitorius HOM05D004596 ORTHO05D005853 3.4e-45 187.2 518 34.0
Aa31LG1G20620 Aethionema arabicum HOM05D004596 ORTHO05D005853 1.7e-44 184.9 516 40.7
Atru.chr4.2330 Acer truncatum HOM05D004596 ORTHO05D005853 3.3e-40 170.6 324 38.3
Zm00001eb056920 Zea mays HOM05D004596 ORTHO05D005853 5.6e-40 169.9 558 38.4
FAN17G0232 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.8e-39 167.5 575 37.9
C08p52390 Brassica napus HOM05D004596 ORTHO05D005853 6.1e-39 166.4 555 39.6
FAN22G1518 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.3e-38 164.5 584 36.6
A09p67970 Brassica napus HOM05D004596 ORTHO05D005853 8.9e-38 162.5 545 39.3
BcaC05g24461 Brassica carinata HOM05D004596 ORTHO05D005853 4.4e-37 160.2 516 39.7
BolC8t52768H Brassica oleracea HOM05D004596 ORTHO05D005853 5.8e-37 159.8 557 39.3
BraA09t42132Z Brassica rapa HOM05D004596 ORTHO05D005853 7.5e-37 159.5 545 39.1
SEGI_05896 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 3.5e-34 150.6 596 34.2
FvH4_4g29700 Fragaria vesca HOM05D004596 ORTHO05D005853 1.7e-33 148.3 578 36.3
Aqoxy7G01427 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 3.0e-33 147.5 552 37.7
FAN07G2222 Fragaria x ananassa HOM05D004596 ORTHO05D005853 3.9e-33 147.1 576 36.5
FAN12G3612 Fragaria x ananassa HOM05D004596 ORTHO05D005853 3.9e-33 147.1 578 36.7
RcHm_v2.0_Chr4g0437941 Rosa chinensis HOM05D004596 ORTHO05D005853 1.8e-30 138.3 607 34.3
Gohir.A10G117700 Gossypium hirsutum HOM05D004596 ORTHO05D005853 1.5e-29 135.2 271 38.0
Sc13g0004790 Simmondsia chinensis HOM05D004596 ORTHO05D005853 1.6e-26 125.2 275 38.9
Mapoly0005s0269 Marchantia polymorpha HOM05D004596 ORTHO05D005853 8.1e-23 112.8 565 34.0
Pp3c8_22390 Physcomitrium patens HOM05D004596 ORTHO05D005853 3.7e-20 104.0 478 36.0
SEGI_35525 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 4.1e-19 100.5 354 31.1
Atru.chr4.2331 Acer truncatum HOM05D004596 ORTHO05D005853 6.0e-18 96.7 161 49.1
SEGI_02681 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 1.4e-14 85.5 160 35.0
FvH4_3g32250 Fragaria vesca HOM05D012906 ORTHO05D013883 4.9e-12 77.0 56 66.1
SMO118G0545 Selaginella moellendorffii HOM05D004596 ORTHO05D005853 2.4e-11 74.7 69 52.2
CDE06G0929 Ceratophyllum demersum HOM05D004596 ORTHO05D005853 3.2e-11 74.3 526 21.9
FvH4_1g24542 Fragaria vesca HOM05D004596 ORTHO05D013883 1.0e-09 69.3 56 62.5
BcaC05g24463 Brassica carinata HOM05D004596 ORTHO05D005853 8.7e-09 66.2 163 37.4
CDE07G0263 Ceratophyllum demersum HOM05D004596 ORTHO05D005853 1.9e-08 65.1 153 26.1
SEGI_10965 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 6.9e-06 56.6 169 27.8


User provided reference genes

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