Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold79G25561 Striga asiatica HOM05D011325 ORTHO05D000630 3.5e-200 701.4 358 100.0
SGA_v2.0_scaffold79G25559 Striga asiatica HOM05D011325 ORTHO05D000630 5.4e-84 315.5 415 51.3
Nitab4.5_0000205g0040 Nicotiana tabacum HOM05D059491 ORTHO05D000630 6.3e-24 115.9 411 29.4
Oeu032035.1 Olea europaea HOM05D011325 ORTHO05D000630 1.2e-22 111.7 422 28.2
Peaxi162Scf00234g00042 Petunia axillaris HOM05D000174 ORTHO05D000630 2.6e-22 110.5 390 29.7
Solyc11g072210.1 Solanum lycopersicum HOM05D000174 ORTHO05D000630 6.5e-21 105.9 356 26.4
Sopen11g029860 Solanum pennellii HOM05D000174 ORTHO05D000630 1.4e-20 104.8 338 26.9
Cc01_g06930 Coffea canephora HOM05D000174 ORTHO05D000630 9.4e-20 102.1 391 29.7
GSVIVG01014844001 Vitis vinifera HOM05D000174 ORTHO05D000630 3.6e-19 100.1 390 27.2
Dinv40916 Davidia involucrata HOM05D008543 ORTHO05D000630 4.6e-19 99.8 334 29.3
Oeu025932.1 Olea europaea HOM05D011325 ORTHO05D000630 6.1e-19 99.4 363 30.3
Sopen07g034340 Solanum pennellii HOM05D011325 ORTHO05D000630 1.8e-18 97.8 345 33.3
CAN.G1085.7 Capsicum annuum HOM05D000174 ORTHO05D000630 3.9e-18 96.7 385 27.8
Nitab4.5_0009408g0010 Nicotiana tabacum HOM05D008543 ORTHO05D000630 3.9e-18 96.7 405 27.7
PGSC0003DMG400022147 Solanum tuberosum HOM05D008543 ORTHO05D000630 2.0e-17 94.4 369 30.4
SGA_v2.0_scaffold79G25560 Striga asiatica HOM05D011325 ORTHO05D000630 4.3e-17 93.2 67 73.1
PGSC0003DMG400034376 Solanum tuberosum HOM05D000174 ORTHO05D000630 5.7e-17 92.8 401 25.9
Cc05_g15710 Coffea canephora HOM05D000174 ORTHO05D000630 7.4e-17 92.4 343 26.5
Rhsim06G0235100 Rhododendron simsii HOM05D000174 ORTHO05D000630 6.3e-16 89.4 413 26.4
Solyc07g066160.1 Solanum lycopersicum HOM05D011325 ORTHO05D000630 8.2e-16 89.0 345 33.0
HanXRQChr03g0079361 Helianthus annuus HOM05D000174 ORTHO05D000630 6.9e-15 85.9 328 27.4
CAN.G623.74 Capsicum annuum HOM05D008543 ORTHO05D000630 9.1e-15 85.5 369 27.4
Oeu006263.1 Olea europaea HOM05D008543 ORTHO05D000630 9.1e-15 85.5 421 26.1
Peaxi162Scf00232g00062 Petunia axillaris HOM05D008543 ORTHO05D000630 1.2e-14 85.1 304 27.0
Migut.N02396 Erythranthe guttata HOM05D000174 ORTHO05D000630 1.5e-14 84.7 458 25.1
Oeu052027.2 Olea europaea HOM05D000784 ORTHO05D000116 2.0e-14 84.3 306 26.1
Nitab4.5_0000152g0060 Nicotiana tabacum HOM05D008543 ORTHO05D000630 4.5e-14 83.2 430 25.8
Sc16g0010820 Simmondsia chinensis HOM05D008543 ORTHO05D000630 5.9e-14 82.8 334 25.7
Actinidia03675 Actinidia chinensis HOM05D000174 ORTHO05D000630 3.8e-13 80.1 360 30.8
Lj1C901G3 Lonicera japonica HOM05D000174 ORTHO05D000630 8.5e-13 79.0 332 32.2
arahy.Tifrunner.gnm1.ann1.YK7I6N Arachis hypogaea HOM05D008543 ORTHO05D000630 1.9e-12 77.8 360 23.9
MD03G1043000 Malus domestica HOM05D000174 ORTHO05D000630 1.9e-12 77.8 414 24.9
MD11G1046000 Malus domestica HOM05D000174 ORTHO05D000630 2.5e-12 77.4 420 25.2
Nitab4.5_0025069g0010 Nicotiana tabacum HOM05D059491 ORTHO05D000630 2.5e-12 77.4 333 27.9
Oeu032036.1 Olea europaea HOM05D011325 ORTHO05D000630 2.5e-12 77.4 94 47.9
CSS0041839 Camellia sinensis var. sinensis HOM05D008543 ORTHO05D000630 4.2e-12 76.6 453 24.5
Lj8C183G11 Lonicera japonica HOM05D000174 ORTHO05D000630 5.5e-12 76.3 290 25.9
HanXRQChr13g0409261 Helianthus annuus HOM05D000174 ORTHO05D000630 7.2e-12 75.9 312 26.9
Actinidia30352 Actinidia chinensis HOM05D008543 ORTHO05D000630 2.7e-11 73.9 388 25.3
arahy.Tifrunner.gnm1.ann1.1FA9DV Arachis hypogaea HOM05D008543 ORTHO05D000630 3.6e-11 73.6 397 23.4
Aqoxy4G02266 Aquilegia oxysepala HOM05D000174 ORTHO05D000630 4.7e-11 73.2 308 26.0
Rhsim04G0007800 Rhododendron simsii HOM05D000174 ORTHO05D000630 4.7e-11 73.2 327 30.6
Atru.chr2.3896 Acer truncatum HOM05D000174 ORTHO05D000630 1.0e-10 72.0 368 23.1
ECA240G0792 Erigeron canadensis HOM05D000174 ORTHO05D000630 1.8e-10 71.2 381 24.7
CARHR269600 Cardamine hirsuta HOM05D000174 ORTHO05D000630 2.3e-10 70.9 293 25.3
Oeu052885.1 Olea europaea HOM05D008543 ORTHO05D000630 2.3e-10 70.9 353 25.5
FAN25G3117 Fragaria x ananassa HOM05D000174 ORTHO05D000630 3.0e-10 70.5 355 27.3
RcHm_v2.0_Chr5g0074621 Rosa chinensis HOM05D000174 ORTHO05D000630 3.0e-10 70.5 453 25.2
Sed0000150 Sechium edule HOM05D014059 ORTHO05D019015 3.9e-10 70.1 240 28.3
Cpa.g.sc12.67 Carica papaya HOM05D000174 ORTHO05D000630 6.7e-10 69.3 347 26.5
FAN11G0349 Fragaria x ananassa HOM05D000174 ORTHO05D000630 6.7e-10 69.3 399 25.6
DCAR_013757 Daucus carota HOM05D000174 ORTHO05D000630 8.8e-10 68.9 357 25.8
TAR636G0894 Trochodendron aralioides HOM05D008543 ORTHO05D000630 8.8e-10 68.9 354 24.3
FvH4_3g41600 Fragaria vesca HOM05D000174 ORTHO05D000630 1.1e-09 68.6 398 27.1
FAN21G0599 Fragaria x ananassa HOM05D000174 ORTHO05D000630 1.5e-09 68.2 350 27.1
Nitab4.5_0003570g0030 Nicotiana tabacum HOM05D008543 ORTHO05D000630 2.0e-09 67.8 109 36.7
Oeu025931.1 Olea europaea HOM05D011325 ORTHO05D000630 2.0e-09 67.8 377 24.9
Sopen10g025660 Solanum pennellii HOM05D011325 ORTHO05D000630 2.0e-09 67.8 106 41.5
AL8G31830 Arabidopsis lyrata HOM05D000174 ORTHO05D000630 2.6e-09 67.4 306 26.1
QL01p020579 Quercus lobata HOM05D008543 ORTHO05D000630 2.6e-09 67.4 327 26.3
Actinidia23303 Actinidia chinensis HOM05D000174 ORTHO05D000630 3.3e-09 67.0 197 27.9
Prupe.6G035400 Prunus persica HOM05D000174 ORTHO05D000630 4.4e-09 66.6 444 23.6
CSS0016853 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000630 9.7e-09 65.5 105 41.0
THA.LOC104817725 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 9.7e-09 65.5 319 26.0
TAR627G0908 Trochodendron aralioides HOM05D000174 ORTHO05D000630 1.7e-08 64.7 250 26.0
Eucgr.F03645 Eucalyptus grandis HOM05D008543 ORTHO05D000630 2.2e-08 64.3 320 25.6
Sopen10g026890 Solanum pennellii HOM05D011325 ORTHO05D000630 2.2e-08 64.3 106 40.6
BcaNung02386 Brassica carinata HOM05D000174 ORTHO05D001526 3.7e-08 63.5 275 23.6
Oeu032037.1 Olea europaea HOM05D011325 ORTHO05D000630 3.7e-08 63.5 94 44.7
Ah.06g195070 Amaranthus hybridus HOM05D000174 ORTHO05D000630 4.8e-08 63.2 288 31.9
Nn1g07630 Nelumbo nucifera HOM05D000174 ORTHO05D000630 4.8e-08 63.2 369 23.0
PGR042G3277 Punica granatum HOM05D000174 ORTHO05D001526 8.2e-08 62.4 283 26.5
unitig_578.g16756 Utricularia gibba HOM05D000174 ORTHO05D001526 8.2e-08 62.4 299 24.4
BraA03t15420Z Brassica rapa HOM05D000174 ORTHO05D001526 1.1e-07 62.0 278 24.8
QL07p014639 Quercus lobata HOM05D008543 ORTHO05D000630 1.1e-07 62.0 288 26.0
Sabra04G0138600 Salix brachista HOM05D000174 ORTHO05D001526 1.8e-07 61.2 241 25.3
Sed0007909 Sechium edule HOM05D014059 ORTHO05D019015 1.8e-07 61.2 240 25.4
C07p61070 Brassica napus HOM05D000174 ORTHO05D001526 2.4e-07 60.8 275 23.3
BolC7t46532H Brassica oleracea HOM05D000174 ORTHO05D001526 2.4e-07 60.8 275 23.3
A03p63500 Brassica napus HOM05D000174 ORTHO05D001526 3.1e-07 60.5 278 24.5
Duzib052G0399 Durio zibethinus HOM05D000174 ORTHO05D001526 3.1e-07 60.5 251 25.5
FAN16G0761 Fragaria x ananassa HOM05D000174 ORTHO05D000630 4.1e-07 60.1 456 25.2
Sp6g18050 Schrenkiella parvula HOM05D000174 ORTHO05D000630 4.1e-07 60.1 255 25.1
CSS0027724 Camellia sinensis var. sinensis HOM05D008543 ORTHO05D000630 5.3e-07 59.7 116 34.5
Carub.0008s1652 Capsella rubella HOM05D000174 ORTHO05D000630 5.3e-07 59.7 303 24.4
DCAR_017611 Daucus carota HOM05D000174 ORTHO05D000630 5.3e-07 59.7 115 33.9
Nitab4.5_0007754g0010 Nicotiana tabacum HOM05D000174 ORTHO05D001526 7.0e-07 59.3 295 26.1
Duzib132G0848 Durio zibethinus HOM05D000174 ORTHO05D001526 9.1e-07 58.9 185 27.0
THA.LOC104811702 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 9.1e-07 58.9 341 24.3
BcaC01g06408 Brassica carinata HOM05D000174 ORTHO05D000630 1.2e-06 58.5 257 30.7
CANSAT54G2384 Cannabis sativa HOM05D008543 ORTHO05D000630 1.2e-06 58.5 342 22.2
CARHR159010 Cardamine hirsuta HOM05D000174 ORTHO05D000630 1.2e-06 58.5 119 36.1
DCAR_006286 Daucus carota HOM05D000174 ORTHO05D001526 1.5e-06 58.2 272 24.3
SGA_v2.0_scaffold7G03548 Striga asiatica HOM05D008543 ORTHO05D000630 1.5e-06 58.2 149 28.2
AL7G15890 Arabidopsis lyrata HOM05D000174 ORTHO05D001526 2.0e-06 57.8 272 24.3
AT4G35280 Arabidopsis thaliana HOM05D000174 ORTHO05D001526 2.0e-06 57.8 277 24.2
BcaB08g35982 Brassica carinata HOM05D000174 ORTHO05D000630 2.0e-06 57.8 288 24.3
Cc10_g04030 Coffea canephora HOM05D000174 ORTHO05D001526 2.6e-06 57.4 258 26.7
Thecc.02G044700 Theobroma cacao HOM05D000174 ORTHO05D001526 2.6e-06 57.4 231 25.5
unitig_8.g2987 Utricularia gibba HOM05D055333 ORTHO05D051511 2.6e-06 57.4 88 53.4
CARHR243600 Cardamine hirsuta HOM05D000174 ORTHO05D001526 3.5e-06 57.0 247 25.5
Eucgr.I01518 Eucalyptus grandis HOM05D000174 ORTHO05D001526 3.5e-06 57.0 242 24.4
BolC3t14028H Brassica oleracea HOM05D000174 ORTHO05D000630 4.5e-06 56.6 257 30.7
Cfa010152 Carpinus fangiana HOM05D019813 ORTHO05D000630 4.5e-06 56.6 294 31.3
Lsat_1_v5_gn_9_88600 Lactuca sativa HOM05D000174 ORTHO05D000630 4.5e-06 56.6 427 20.6
MD10G1139600 Malus domestica HOM05D000174 ORTHO05D001526 4.5e-06 56.6 240 24.6
Potri.004G205300 Populus trichocarpa HOM05D000174 ORTHO05D001526 4.5e-06 56.6 263 24.0
QL08p000516 Quercus lobata HOM05D000174 ORTHO05D000630 4.5e-06 56.6 409 22.5
C03p16000 Brassica napus HOM05D000174 ORTHO05D000630 5.9e-06 56.2 257 30.7
Lj3g0001949 Lotus japonicus HOM05D000174 ORTHO05D001526 5.9e-06 56.2 248 27.4
MBI15_g44395_MAGBIO Magnolia biondii HOM05D000174 ORTHO05D000630 5.9e-06 56.2 122 33.6
Peaxi162Scf00051g00034 Petunia axillaris HOM05D000174 ORTHO05D001526 5.9e-06 56.2 254 25.2
Cc02_g24700 Coffea canephora HOM05D001867 ORTHO05D001708 7.7e-06 55.8 247 20.6
Nitab4.5_0000633g0100 Nicotiana tabacum HOM05D000174 ORTHO05D001526 7.7e-06 55.8 286 25.2
TAR625G1147 Trochodendron aralioides HOM05D000174 ORTHO05D001526 7.7e-06 55.8 243 25.1


User provided reference genes

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