Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.6e-247 859.0 428 100.0
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.4e-184 649.8 420 76.4
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 4.8e-180 634.8 419 76.8
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 6.3e-172 607.8 427 72.4
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.0e-170 602.8 434 70.7
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 2.0e-170 602.8 416 73.6
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 1.7e-169 599.7 423 71.9
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 5.0e-169 598.2 415 73.0
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 2.5e-168 595.9 425 71.1
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.6e-167 593.2 417 72.9
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 2.3e-166 589.3 422 71.1
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 3.0e-166 589.0 416 72.4
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 3.0e-166 589.0 416 72.4
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 6.7e-166 587.8 416 72.6
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 7.4e-165 584.3 433 68.8
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.7e-164 583.2 417 71.0
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 5.9e-162 574.7 433 69.3
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.3e-161 573.5 427 68.4
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 3.8e-161 572.0 423 70.2
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.1e-160 570.5 423 70.0
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 3.2e-160 568.9 419 70.6
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 7.2e-160 567.8 427 68.6
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 8.0e-159 564.3 422 68.7
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.0e-158 563.9 424 69.1
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.0e-158 563.9 420 69.8
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 2.3e-158 562.8 422 68.5
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 3.9e-158 562.0 428 68.0
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 6.7e-158 561.2 420 70.2
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 6.7e-158 561.2 427 67.7
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.5e-157 560.1 430 68.6
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 3.3e-157 558.9 420 68.3
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 7.4e-157 557.8 417 70.0
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.7e-156 556.6 385 73.2
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.1e-155 553.9 427 67.7
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 4.5e-154 548.5 427 65.3
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 3.8e-153 545.4 408 69.4
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 8.5e-153 544.3 417 67.6
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.1e-152 543.9 418 69.1
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.1e-152 543.9 430 65.1
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.9e-152 543.1 385 71.4
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 2.5e-152 542.7 401 69.1
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 4.2e-152 542.0 417 68.3
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 5.5e-152 541.6 414 68.1
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 3.6e-151 538.9 410 67.8
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 4.7e-151 538.5 418 67.0
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.7e-151 538.5 414 70.0
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 8.0e-151 537.7 360 74.7
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.4e-150 537.0 420 67.6
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 2.3e-150 536.2 419 67.1
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 2.3e-150 536.2 419 66.8
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 3.0e-150 535.8 419 66.6
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 8.8e-150 534.3 422 66.4
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.2e-149 533.9 424 65.3
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.2e-149 533.9 427 66.7
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.5e-149 533.5 391 70.3
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 2.6e-149 532.7 421 67.9
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 4.4e-149 531.9 422 65.9
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.3e-148 530.4 417 67.4
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.3e-148 530.4 387 70.0
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.3e-148 530.4 427 65.8
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.8e-148 529.3 345 76.8
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 3.7e-148 528.9 421 66.3
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 4.8e-148 528.5 378 69.6
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 6.3e-148 528.1 355 73.2
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 1.4e-147 526.9 402 68.2
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.4e-147 526.9 416 66.6
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.4e-147 526.9 423 64.1
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 2.4e-147 526.2 381 71.4
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 3.1e-147 525.8 419 64.9
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 3.1e-147 525.8 370 71.6
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 5.3e-147 525.0 417 65.9
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 9.1e-147 524.2 403 66.0
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 9.1e-147 524.2 433 63.3
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.2e-146 523.9 355 73.2
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 2.7e-146 522.7 355 73.0
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.7e-146 522.7 355 73.0
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.7e-146 522.7 355 73.2
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 4.5e-146 521.9 417 65.7
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 7.7e-146 521.2 420 66.2
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.3e-145 520.4 399 66.4
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 1.3e-145 520.4 385 68.1
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.3e-145 520.4 447 63.1
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.7e-145 520.0 420 65.5
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.0e-145 518.5 399 68.7
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 5.0e-145 518.5 389 66.8
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 8.5e-145 517.7 403 65.0
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 1.1e-144 517.3 472 60.6
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.9e-144 516.5 363 70.2
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 9.4e-144 514.2 422 65.2
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 1.6e-143 513.5 418 63.6
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 1.6e-143 513.5 418 63.6
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.1e-143 513.1 378 67.2
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 2.3e-142 509.6 405 64.0
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 2.3e-142 509.6 405 64.0
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 5.2e-142 508.4 405 63.5
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.5e-141 506.9 357 69.2
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.8e-139 500.0 308 79.2
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 4.1e-139 498.8 418 64.4
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 9.1e-139 497.7 420 63.6
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 1.2e-138 497.3 457 58.9
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 3.0e-134 482.6 426 62.4
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.3e-132 477.2 353 69.7
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.1e-128 464.2 393 62.1
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.1e-123 447.6 367 62.7
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 1.7e-121 440.3 349 62.8
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.0e-121 439.5 353 60.9
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.2e-119 434.1 322 69.6
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 3.0e-113 412.9 357 59.4
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 2.4e-107 393.3 299 66.6
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.8e-102 377.1 349 58.5
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 2.2e-100 370.2 291 66.3
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 7.9e-82 308.5 328 50.9
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 5.1e-81 305.8 324 54.0
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 4.5e-77 292.7 316 48.7
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 6.4e-76 288.9 298 48.3
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.3e-71 274.6 199 67.3
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 6.7e-65 252.3 181 71.3
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.2e-50 204.9 178 59.0
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 4.5e-45 186.4 144 61.1
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 3.1e-38 163.7 136 65.4
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 4.2e-35 153.3 123 65.9
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 6.8e-33 146.0 102 68.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.8e-23 114.0 133 48.1
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.7e-20 104.8 159 38.4
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.6e-18 98.2 107 48.6
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.5e-16 91.7 64 67.2
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 8.6e-12 75.9 71 54.9


User provided reference genes

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