Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 5.2e-55 217.6 121 100.0
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 2.3e-34 149.1 133 67.7
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 2.5e-25 119.0 122 60.7
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.2e-24 116.7 120 57.5
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.8e-23 112.8 117 56.4
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 2.3e-23 112.5 120 55.0
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 2.0e-22 109.4 125 54.4
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 2.0e-22 109.4 120 55.8
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 2.6e-22 109.0 120 56.7
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 4.4e-22 108.2 117 56.4
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 7.5e-22 107.5 113 56.6
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 7.5e-22 107.5 121 54.5
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 9.8e-22 107.1 127 51.2
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 1.3e-21 106.7 121 51.2
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 2.2e-21 105.9 122 54.1
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 2.2e-21 105.9 120 50.8
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.2e-21 105.9 122 51.6
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 2.9e-21 105.5 119 52.1
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 2.9e-21 105.5 116 51.7
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 4.9e-21 104.8 123 53.7
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 4.9e-21 104.8 121 52.9
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 4.9e-21 104.8 118 54.2
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 6.4e-21 104.4 119 51.3
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 6.4e-21 104.4 121 52.9
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 6.4e-21 104.4 120 50.0
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 8.3e-21 104.0 126 51.6
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 8.3e-21 104.0 122 50.8
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 8.3e-21 104.0 123 51.2
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 8.3e-21 104.0 122 50.8
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 1.4e-20 103.2 125 51.2
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 1.4e-20 103.2 125 51.2
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 1.4e-20 103.2 120 50.8
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.4e-20 103.2 121 50.4
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 1.9e-20 102.8 121 50.4
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 2.4e-20 102.4 124 50.0
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 3.2e-20 102.1 117 53.8
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 3.2e-20 102.1 116 55.2
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 3.2e-20 102.1 105 59.0
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 4.1e-20 101.7 118 52.5
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 4.1e-20 101.7 120 50.8
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 4.1e-20 101.7 111 52.3
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 4.1e-20 101.7 120 51.7
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 5.4e-20 101.3 124 46.8
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 5.4e-20 101.3 120 57.5
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 7.0e-20 100.9 116 55.2
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 9.2e-20 100.5 120 50.0
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 9.2e-20 100.5 126 52.4
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.2e-19 100.1 111 52.3
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 1.6e-19 99.8 119 52.9
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.6e-19 99.8 120 52.5
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.6e-19 99.8 116 50.9
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.0e-19 99.4 118 50.8
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.7e-19 99.0 118 50.8
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.7e-19 99.0 118 50.8
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 4.6e-19 98.2 121 50.4
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 6.0e-19 97.8 118 50.8
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 6.0e-19 97.8 115 51.3
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 6.0e-19 97.8 110 53.6
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 7.8e-19 97.4 124 50.0
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 1.0e-18 97.1 108 51.9
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 2.3e-18 95.9 122 50.0
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 2.3e-18 95.9 123 49.6
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.3e-18 95.9 120 51.7
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 3.0e-18 95.5 102 55.9
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 3.9e-18 95.1 110 48.2
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 6.6e-18 94.4 118 49.2
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 6.6e-18 94.4 143 44.8
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 8.6e-18 94.0 119 47.9
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 8.6e-18 94.0 124 47.6
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 8.6e-18 94.0 65 66.2
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.5e-17 93.2 64 67.2
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 1.5e-17 93.2 110 52.7
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 3.3e-17 92.0 66 65.2
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 4.3e-17 91.7 118 48.3
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 4.3e-17 91.7 110 50.0
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 7.3e-17 90.9 65 60.0
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 9.5e-17 90.5 118 48.3
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 1.2e-16 90.1 118 49.2
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 1.2e-16 90.1 116 46.6
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 2.1e-16 89.4 123 47.2
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 2.1e-16 89.4 58 67.2
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 2.8e-16 89.0 111 46.8
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 3.6e-16 88.6 79 60.8
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 6.2e-16 87.8 106 51.9
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 8.1e-16 87.4 112 48.2
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 1.1e-15 87.0 126 46.0
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.4e-15 86.7 118 47.5
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 1.4e-15 86.7 126 44.4
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 2.3e-15 85.9 122 45.9
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 3.1e-15 85.5 55 67.3
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 4.0e-15 85.1 108 47.2
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 6.8e-15 84.3 126 45.2
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 6.8e-15 84.3 108 46.3
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 8.9e-15 84.0 115 44.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 2.6e-14 82.4 100 52.0
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 7.5e-14 80.9 108 50.0
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 1.3e-13 80.1 121 43.0
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 1.1e-12 77.0 107 48.6
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.1e-12 77.0 67 55.2
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.1e-12 77.0 67 55.2
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.2e-12 75.5 97 47.4
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 3.2e-12 75.5 109 45.0
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 9.2e-12 73.9 123 42.3
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 2.7e-11 72.4 119 41.2
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.5e-11 72.0 91 47.3
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 6.0e-11 71.2 123 42.3
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.0e-10 68.9 97 45.4
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.9e-09 66.2 119 38.7
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 9.5e-09 63.9 58 55.2
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 2.3e-07 59.3 68 51.5
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.5e-06 56.6 105 41.0
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 7.6e-06 54.3 115 37.4


User provided reference genes

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