Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 1.2e-159 566.6 311 100.0
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 1.6e-63 247.3 365 48.8
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 2.9e-62 243.0 375 48.0
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 3.4e-58 229.6 360 48.1
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 5.8e-58 228.8 357 47.1
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 2.4e-56 223.4 377 45.6
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.6e-55 220.7 379 44.1
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 5.0e-54 215.7 357 47.1
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 8.6e-54 214.9 357 45.7
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 1.1e-53 214.5 366 45.6
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 1.9e-53 213.8 362 44.8
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 3.3e-53 213.0 355 45.4
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 5.6e-53 212.2 375 44.3
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 9.5e-53 211.5 358 45.0
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 9.5e-53 211.5 349 45.6
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 1.6e-52 210.7 376 43.6
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 3.6e-52 209.5 382 43.7
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 8.1e-52 208.4 378 43.4
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 1.1e-51 208.0 389 42.4
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.4e-51 207.6 384 41.9
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.8e-51 207.2 376 43.1
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.8e-51 207.2 354 44.4
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 2.3e-51 206.8 364 44.5
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 4.0e-51 206.1 379 42.7
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.0e-51 206.1 357 46.2
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 6.8e-51 205.3 371 43.9
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 8.9e-51 204.9 379 44.3
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 8.9e-51 204.9 354 44.9
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 1.2e-50 204.5 377 44.8
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 1.2e-50 204.5 387 42.9
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 1.5e-50 204.1 360 43.6
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 2.0e-50 203.8 365 45.2
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 2.0e-50 203.8 363 43.0
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 2.0e-50 203.8 352 45.2
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 2.6e-50 203.4 368 43.5
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 4.4e-50 202.6 346 45.1
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 5.8e-50 202.2 355 45.9
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 7.5e-50 201.8 361 44.3
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 7.5e-50 201.8 349 45.0
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 7.5e-50 201.8 374 40.4
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 1.3e-49 201.1 340 46.8
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 1.3e-49 201.1 377 43.5
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 2.2e-49 200.3 379 42.7
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.9e-49 199.9 354 41.2
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 2.9e-49 199.9 340 43.5
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 2.9e-49 199.9 399 42.1
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 4.9e-49 199.1 381 44.1
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 1.1e-48 198.0 380 42.4
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 1.1e-48 198.0 378 43.4
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 1.4e-48 197.6 372 44.4
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 3.2e-48 196.4 361 43.2
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 3.2e-48 196.4 350 44.3
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 4.1e-48 196.1 368 43.8
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 1.2e-47 194.5 364 42.0
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 1.2e-47 194.5 363 42.4
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 1.2e-47 194.5 320 48.4
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 1.6e-47 194.1 367 41.4
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 2.7e-47 193.4 349 41.8
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 4.6e-47 192.6 359 42.9
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 7.8e-47 191.8 329 42.6
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.0e-46 191.4 452 41.2
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.3e-46 191.0 368 42.7
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 4.3e-45 186.0 374 42.2
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 9.5e-45 184.9 347 44.7
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 1.2e-44 184.5 376 41.0
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 1.2e-44 184.5 335 43.0
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 1.2e-44 184.5 378 39.9
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 1.2e-44 184.5 351 43.3
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.2e-44 184.5 362 40.6
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 3.6e-44 183.0 314 43.6
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 3.6e-44 183.0 332 40.4
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 3.6e-44 183.0 357 42.0
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 6.2e-44 182.2 367 42.2
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.1e-43 181.4 362 42.5
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 1.4e-43 181.0 392 40.6
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 1.8e-43 180.6 352 42.6
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 2.3e-43 180.3 375 42.9
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 2.3e-43 180.3 373 41.8
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.0e-43 179.5 349 43.8
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 8.9e-43 178.3 342 41.8
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.2e-42 177.9 374 40.9
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.5e-42 177.6 362 42.3
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 2.6e-42 176.8 389 38.0
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 5.8e-42 175.6 380 41.6
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.6e-42 175.3 352 42.6
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 9.9e-42 174.9 378 40.7
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.7e-41 174.1 340 43.2
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 2.2e-41 173.7 389 40.6
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 2.2e-41 173.7 322 44.7
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 3.7e-41 172.9 330 42.4
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 3.7e-41 172.9 330 42.7
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 8.3e-41 171.8 360 41.9
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.1e-40 171.4 346 44.5
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 1.4e-40 171.0 341 43.7
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 2.4e-40 170.2 359 39.8
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 2.4e-40 170.2 341 41.9
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 3.2e-40 169.9 344 43.3
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 3.2e-40 169.9 342 41.5
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 4.1e-40 169.5 347 40.1
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 9.2e-40 168.3 359 42.3
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 1.2e-39 167.9 301 44.5
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 2.7e-39 166.8 338 42.6
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 2.7e-39 166.8 338 42.0
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 2.7e-39 166.8 334 42.2
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 1.3e-38 164.5 355 40.8
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.3e-38 164.5 290 46.9
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 1.3e-38 164.5 332 42.5
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.7e-38 164.1 365 39.5
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.3e-38 163.7 366 39.3
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.0e-38 163.3 293 46.1
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 6.6e-38 162.2 323 39.9
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 1.1e-37 161.4 348 43.7
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 1.1e-37 161.4 326 41.7
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 1.5e-37 161.0 346 41.9
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.5e-37 160.2 361 41.0
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 2.5e-37 160.2 290 42.8
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 3.3e-37 159.8 309 41.4
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 9.6e-37 158.3 371 39.1
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 1.2e-36 157.9 244 48.8
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 4.7e-36 156.0 340 38.5
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 4.7e-36 156.0 336 41.7
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 6.2e-36 155.6 337 39.5
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 6.2e-36 155.6 300 43.3
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.1e-35 153.3 275 42.9
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 3.1e-35 153.3 288 42.7
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 5.2e-35 152.5 308 39.6
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 6.8e-35 152.1 371 41.5
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 8.9e-35 151.8 323 37.8
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 2.6e-34 150.2 361 37.1
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 3.4e-34 149.8 331 40.5
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.7e-33 147.5 346 37.3
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 8.4e-33 145.2 311 41.2
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 7.1e-32 142.1 306 39.2
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 7.8e-31 138.7 313 39.9
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 1.7e-30 137.5 309 38.8
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 3.9e-30 136.3 184 52.2
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 1.5e-29 134.4 339 36.9
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 2.5e-29 133.7 301 39.5
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 2.8e-28 130.2 195 48.2
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 2.8e-28 130.2 249 41.0
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.1e-27 128.3 207 48.3
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 4.0e-27 126.3 194 47.9
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 5.3e-27 125.9 371 33.7
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 4.4e-26 122.9 261 41.8
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 5.8e-26 122.5 376 34.6
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 7.6e-26 122.1 328 36.9
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 7.6e-26 122.1 328 36.9
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 7.6e-26 122.1 251 38.6
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 7.6e-26 122.1 382 33.8
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 2.2e-25 120.6 322 35.4
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.4e-24 117.9 241 40.2
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 3.5e-23 113.2 241 39.0
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 4.6e-23 112.8 303 37.0
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 6.6e-22 109.0 208 44.2
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 1.5e-21 107.8 364 31.3
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 2.5e-21 107.1 208 43.8
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 2.5e-21 107.1 208 43.8
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.3e-20 104.8 208 43.3
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.3e-20 104.8 288 36.8
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 1.6e-20 104.4 249 36.9
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 8.1e-20 102.1 254 39.4
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 4.0e-19 99.8 121 56.2
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 5.8e-18 95.9 250 38.4
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 6.4e-17 92.4 202 40.1
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.2e-15 88.2 195 42.6
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.1e-13 81.6 277 30.3
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 1.2e-10 71.6 291 32.6
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 4.5e-10 69.7 159 40.3
SMO340G0107 Selaginella moellendorffii HOM05D003676 ORTHO05D004262 4.5e-10 69.7 282 27.7
PSO700G0244 Papaver somniferum HOM05D065651 ORTHO05D004262 8.4e-09 65.5 250 33.6
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 8.4e-09 65.5 308 29.5
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 8.4e-09 65.5 308 29.5
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.2e-07 61.6 313 29.7
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 2.7e-07 60.5 120 40.0
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 3.5e-07 60.1 63 55.6
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 6.0e-07 59.3 47 70.2
PSO170G2947 Papaver somniferum HOM05D065651 ORTHO05D004262 7.9e-07 58.9 247 31.2
Gorai.006G262100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.3e-06 58.2 47 68.1
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 3.9e-06 56.6 45 68.9


User provided reference genes

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