Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 4.3e-101 371.3 187 100.0
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 1.1e-43 180.6 176 56.2
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.9e-42 174.9 186 57.0
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.0e-41 174.1 201 51.2
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.9e-40 169.9 190 54.2
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 5.6e-40 168.3 165 55.8
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 1.6e-39 166.8 176 49.4
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 8.0e-39 164.5 176 51.1
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 2.3e-38 162.9 176 50.0
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 3.0e-38 162.5 171 52.6
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 6.8e-38 161.4 183 54.6
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 2.6e-37 159.5 174 48.9
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 4.4e-37 158.7 177 50.3
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 5.7e-37 158.3 174 53.4
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 7.5e-37 157.9 180 50.0
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 9.8e-37 157.5 177 47.5
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 1.7e-36 156.8 175 50.3
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 1.7e-36 156.8 173 52.6
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 2.2e-36 156.4 176 48.3
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.2e-36 156.4 174 52.9
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 2.2e-36 156.4 178 48.3
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 2.2e-36 156.4 174 54.0
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.9e-36 156.0 172 54.1
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 4.9e-36 155.2 182 48.9
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 6.4e-36 154.8 172 49.4
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 1.4e-35 153.7 180 48.9
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 1.8e-35 153.3 176 49.4
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 9.2e-35 151.0 175 48.0
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 9.2e-35 151.0 149 53.0
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 1.2e-34 150.6 172 49.4
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.6e-34 150.2 149 52.3
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 1.6e-34 150.2 176 47.7
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.0e-34 149.8 149 52.3
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 3.5e-34 149.1 181 47.5
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 7.8e-34 147.9 174 50.6
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 7.8e-34 147.9 181 47.5
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 1.0e-33 147.5 182 46.7
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 1.7e-33 146.7 177 46.9
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 3.0e-33 146.0 177 46.9
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 3.9e-33 145.6 175 48.6
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 8.6e-33 144.4 185 46.5
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.1e-32 144.1 178 47.8
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 1.9e-32 143.3 178 48.3
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 4.3e-32 142.1 113 61.9
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 7.3e-32 141.4 173 46.8
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 2.1e-31 139.8 182 48.9
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 2.1e-31 139.8 182 47.3
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 6.2e-31 138.3 179 45.3
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 6.2e-31 138.3 171 48.5
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 1.4e-30 137.1 108 63.0
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 2.3e-30 136.3 108 58.3
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 4.0e-30 135.6 107 61.7
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 4.0e-30 135.6 174 49.4
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 5.2e-30 135.2 171 47.4
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 6.8e-30 134.8 158 46.2
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 1.2e-29 134.0 173 44.5
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 2.0e-29 133.3 173 45.1
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 3.4e-29 132.5 186 45.2
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 4.4e-29 132.1 112 59.8
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 4.4e-29 132.1 111 57.7
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 1.7e-28 130.2 173 46.2
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 6.4e-28 128.3 106 59.4
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 1.1e-27 127.5 105 61.0
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 3.2e-27 125.9 106 56.6
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 4.1e-27 125.6 177 45.8
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 7.0e-27 124.8 176 44.9
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 7.0e-27 124.8 110 52.7
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 1.2e-26 124.0 186 40.9
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 1.0e-25 120.9 171 41.5
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 1.3e-25 120.6 106 54.7
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 2.3e-25 119.8 183 42.1
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 3.9e-25 119.0 218 35.8
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 6.6e-25 118.2 104 60.6
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.6e-25 118.2 120 50.0
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.6e-25 118.2 120 50.0
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 6.6e-25 118.2 111 55.0
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 1.1e-24 117.5 112 55.4
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 1.5e-24 117.1 112 55.4
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 1.5e-24 117.1 101 63.4
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 1.9e-24 116.7 115 52.2
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 5.6e-24 115.2 112 53.6
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.6e-23 113.6 202 41.6
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 1.8e-22 110.2 186 38.2
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 1.8e-22 110.2 196 40.8
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 1.8e-22 110.2 91 58.2
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 2.3e-22 109.8 188 37.8
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 3.1e-22 109.4 195 40.5
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 4.0e-22 109.0 105 55.2
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 5.2e-22 108.6 177 38.4
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 8.9e-22 107.8 198 37.9
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 2.0e-21 106.7 173 39.3
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 2.6e-21 106.3 86 60.5
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 5.8e-21 105.1 201 39.3
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 7.5e-21 104.8 204 36.8
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 9.8e-21 104.4 207 34.8
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 1.3e-20 104.0 118 46.6
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.7e-20 102.4 195 39.0
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 3.7e-20 102.4 129 44.2
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 8.3e-20 101.3 190 37.9
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 8.3e-20 101.3 207 37.7
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 1.1e-19 100.9 189 39.2
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 1.1e-19 100.9 202 39.1
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 1.9e-19 100.1 195 40.0
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 1.9e-19 100.1 197 37.6
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 1.9e-19 100.1 196 38.3
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 2.4e-19 99.8 109 48.6
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 3.2e-19 99.4 107 51.4
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 4.1e-19 99.0 197 37.1
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 2.7e-18 96.3 192 37.5
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.5e-18 95.9 195 38.5
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 4.6e-18 95.5 192 37.5
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 7.8e-18 94.7 103 45.6
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 3.0e-17 92.8 198 36.9
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 3.9e-17 92.4 189 37.0
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.1e-16 90.9 197 35.5
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 4.3e-16 89.0 197 33.5
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 5.6e-16 88.6 94 43.6
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.1e-15 86.7 179 34.1
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.4e-14 84.0 179 33.5
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 1.8e-14 83.6 62 56.5
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 2.3e-14 83.2 149 35.6
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 4.0e-14 82.4 83 48.2
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 4.0e-14 82.4 146 34.2
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 1.2e-13 80.9 69 52.2
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 1.2e-13 80.9 64 57.8
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 3.4e-13 79.3 126 35.7
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 9.9e-13 77.8 126 34.9
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 4.9e-12 75.5 65 49.2
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 4.9e-12 75.5 65 49.2
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 4.9e-12 75.5 65 49.2
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 4.9e-12 75.5 65 49.2


User provided reference genes

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