Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold77G25307 Striga asiatica HOM05D004548 ORTHO05D005402 2.5e-124 448.7 224 100.0
MSTRG.17963 Avicennia marina HOM05D004548 ORTHO05D005402 3.3e-108 395.2 217 86.6
Migut.N00675 Erythranthe guttata HOM05D004548 ORTHO05D005402 2.2e-104 382.5 222 83.8
Lj1A1122T48 Lonicera japonica HOM05D004548 ORTHO05D005402 5.0e-96 354.8 216 79.6
SalBow3G2027 Salvia bowleyana HOM05D004548 ORTHO05D005402 8.5e-96 354.0 222 75.7
TAR374G1650 Trochodendron aralioides HOM05D004548 ORTHO05D005402 2.5e-95 352.4 216 81.0
Rhsim12G0068000 Rhododendron simsii HOM05D004548 ORTHO05D005402 1.6e-94 349.7 223 74.9
CSS0047568 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 2.3e-93 345.9 216 77.8
unitig_0.g417 Utricularia gibba HOM05D004548 ORTHO05D005402 4.0e-93 345.1 219 78.5
GSVIVG01025270001 Vitis vinifera HOM05D004548 ORTHO05D005402 3.4e-92 342.0 216 75.9
Prupe.1G211800 Prunus persica HOM05D004548 ORTHO05D005402 5.7e-92 341.3 217 77.4
Peaxi162Scf01242g00029 Petunia axillaris HOM05D004548 ORTHO05D005402 9.8e-92 340.5 224 75.4
Hma1.2p1_0738F.1_g210920 Hydrangea macrophylla HOM05D004548 ORTHO05D005402 8.3e-91 337.4 217 74.7
Peaxi162Scf00235g00217 Petunia axillaris HOM05D004548 ORTHO05D005402 1.1e-90 337.0 217 75.6
Nitab4.5_0007144g0020 Nicotiana tabacum HOM05D004548 ORTHO05D005402 5.4e-90 334.7 216 76.4
CAN.G874.37 Capsicum annuum HOM05D004548 ORTHO05D005402 7.0e-90 334.3 224 74.1
CiPaw.06G111100 Carya illinoinensis HOM05D004548 ORTHO05D005402 7.0e-90 334.3 217 76.5
Gohir.D09G002300 Gossypium hirsutum HOM05D004548 ORTHO05D005402 7.0e-90 334.3 217 75.1
FvH4_4g22210 Fragaria vesca HOM05D004548 ORTHO05D005402 1.2e-89 333.6 223 73.5
FAN07G0049 Fragaria x ananassa HOM05D004548 ORTHO05D005402 1.6e-89 333.2 223 73.5
Gorai.006G002800 Gossypium raimondii HOM05D004548 ORTHO05D005402 1.6e-89 333.2 217 74.7
HanXRQChr04g0124971 Helianthus annuus HOM05D004548 ORTHO05D005402 1.6e-89 333.2 221 73.3
Gohir.A09G002500 Gossypium hirsutum HOM05D004548 ORTHO05D005402 2.7e-89 332.4 217 74.2
Nitab4.5_0001348g0030 Nicotiana tabacum HOM05D004548 ORTHO05D005402 2.7e-89 332.4 216 75.9
Manes.12G130500 Manihot esculenta HOM05D004548 ORTHO05D005402 7.7e-89 330.9 216 73.6
Oeu058204.1 Olea europaea HOM05D004548 ORTHO05D005402 7.7e-89 330.9 224 73.7
Solyc06g082980.3 Solanum lycopersicum HOM05D004548 ORTHO05D005402 1.0e-88 330.5 216 73.6
Oeu058206.1 Olea europaea HOM05D004548 ORTHO05D005402 1.3e-88 330.1 224 73.7
Cfa019955 Carpinus fangiana HOM05D004548 ORTHO05D005402 1.7e-88 329.7 222 72.1
QL03p048368 Quercus lobata HOM05D004548 ORTHO05D005402 1.7e-88 329.7 222 73.9
RcHm_v2.0_Chr4g0428441 Rosa chinensis HOM05D004548 ORTHO05D005402 2.3e-88 329.3 223 72.6
Lsat_1_v5_gn_5_6480 Lactuca sativa HOM05D004548 ORTHO05D005402 2.9e-88 328.9 222 72.1
Lsat_1_v5_gn_8_83161 Lactuca sativa HOM05D004548 ORTHO05D005402 2.9e-88 328.9 222 72.1
MD13G1133800 Malus domestica HOM05D004548 ORTHO05D005402 2.9e-88 328.9 221 74.7
FAN12G2246 Fragaria x ananassa HOM05D004548 ORTHO05D005402 6.6e-88 327.8 223 72.6
Sopen06g034370 Solanum pennellii HOM05D004548 ORTHO05D005402 8.6e-88 327.4 216 72.7
PGSC0003DMG400027684 Solanum tuberosum HOM05D004548 ORTHO05D005402 8.6e-88 327.4 216 72.7
Potri.003G160500 Populus trichocarpa HOM05D004548 ORTHO05D005402 1.9e-87 326.2 216 72.7
Aqoxy1G02233 Aquilegia oxysepala HOM05D004548 ORTHO05D005402 2.5e-87 325.9 215 74.0
SGA_v2.0_scaffold95G28703 Striga asiatica HOM05D004548 ORTHO05D005402 2.5e-87 325.9 186 86.6
Duzib187G0077 Durio zibethinus HOM05D004548 ORTHO05D005402 3.3e-87 325.5 217 72.8
TWI18G0021 Tripterygium wilfordii HOM05D004548 ORTHO05D005402 3.3e-87 325.5 221 72.9
Atru.chr12.1469 Acer truncatum HOM05D004548 ORTHO05D005402 4.3e-87 325.1 216 74.5
Glyma.09G186700 Glycine max HOM05D004548 ORTHO05D005402 7.3e-87 324.3 218 73.9
Lj2g0001774 Lotus japonicus HOM05D004548 ORTHO05D005402 9.5e-87 323.9 217 73.7
Nn4g22076 Nelumbo nucifera HOM05D004548 ORTHO05D005402 1.0e-85 320.5 220 71.8
PGR119G2305 Punica granatum HOM05D004548 ORTHO05D005402 1.0e-85 320.5 223 71.7
ECA236G1448 Erigeron canadensis HOM05D004548 ORTHO05D005402 1.8e-85 319.7 216 71.3
Cc01_g15960 Coffea canephora HOM05D004548 ORTHO05D005402 8.9e-85 317.4 217 66.8
Thecc.01G240000 Theobroma cacao HOM05D004548 ORTHO05D005402 2.0e-84 316.2 217 71.0
Eucgr.J01653 Eucalyptus grandis HOM05D004548 ORTHO05D005402 2.6e-84 315.8 221 68.3
THA.LOC104807222 Tarenaya hassleriana HOM05D004548 ORTHO05D005402 4.4e-84 315.1 221 72.4
MBI07_g42009_MAGBIO Magnolia biondii HOM05D004548 ORTHO05D005402 1.3e-83 313.5 217 71.4
COL.COLO4_06519 Corchorus olitorius HOM05D004548 ORTHO05D005402 6.4e-83 311.2 219 69.9
Sc17g0004750 Simmondsia chinensis HOM05D004548 ORTHO05D005402 6.4e-83 311.2 223 68.2
BraA07t29333Z Brassica rapa HOM05D004548 ORTHO05D005402 8.3e-83 310.8 215 71.6
Carub.0001s1957 Capsella rubella HOM05D004548 ORTHO05D005402 8.3e-83 310.8 222 70.3
HPP92_007022 Vanilla planifolia HOM05D004548 ORTHO05D005402 8.3e-83 310.8 217 69.1
ClCG07G012080 Citrullus lanatus HOM05D004548 ORTHO05D005402 1.4e-82 310.1 220 66.8
A07p16050 Brassica napus HOM05D004548 ORTHO05D005402 1.8e-82 309.7 215 71.2
Phvul.004G160000 Phaseolus vulgaris HOM05D004548 ORTHO05D005402 1.8e-82 309.7 207 73.4
BcaB03g14416 Brassica carinata HOM05D004548 ORTHO05D005402 2.4e-82 309.3 215 70.7
CANSAT80G0994 Cannabis sativa HOM05D004548 ORTHO05D005402 2.4e-82 309.3 223 68.2
Ciclev10029256m.g Citrus clementina HOM05D004548 ORTHO05D005402 2.4e-82 309.3 216 71.8
Aa31LG7G10030 Aethionema arabicum HOM05D004548 ORTHO05D005402 3.2e-82 308.9 218 68.8
PSO675G5153 Papaver somniferum HOM05D004548 ORTHO05D005402 5.4e-82 308.1 219 68.0
Actinidia33989 Actinidia chinensis HOM05D004548 ORTHO05D005402 7.0e-82 307.8 195 76.4
BcaB03g14346 Brassica carinata HOM05D004548 ORTHO05D005402 7.0e-82 307.8 219 70.8
CsaV3_4G002070 Cucumis sativus L. HOM05D004548 ORTHO05D005402 7.0e-82 307.8 221 65.2
PSO541G3463 Papaver somniferum HOM05D004548 ORTHO05D005402 9.2e-82 307.4 219 67.6
HPP92_007039 Vanilla planifolia HOM05D004548 ORTHO05D005402 9.2e-82 307.4 218 67.9
Lalb_Chr14g0371281 Lupinus albus HOM05D004548 ORTHO05D005402 1.2e-81 307.0 217 71.9
C07p23420 Brassica napus HOM05D004548 ORTHO05D005402 1.6e-81 306.6 219 70.8
BolC7t42875H Brassica oleracea HOM05D004548 ORTHO05D005402 1.6e-81 306.6 219 70.8
MELO3C017829.2 Cucumis melo HOM05D004548 ORTHO05D005402 2.0e-81 306.2 221 64.7
Sp1g17810 Schrenkiella parvula HOM05D004548 ORTHO05D005402 2.0e-81 306.2 220 70.9
VMungo0464G1792 Vigna mungo HOM05D004548 ORTHO05D005402 2.7e-81 305.8 207 72.5
AL1G32850 Arabidopsis lyrata HOM05D004548 ORTHO05D005402 7.8e-81 304.3 218 68.8
Hund23298 Selenicereus undatus HOM05D004548 ORTHO05D005402 7.8e-81 304.3 216 66.2
BolC5t30565H Brassica oleracea HOM05D004548 ORTHO05D005402 1.0e-80 303.9 218 69.3
Sed0003942 Sechium edule HOM05D004548 ORTHO05D005402 1.0e-80 303.9 214 66.4
Thhalv10008732m.g Eutrema salsugineum HOM05D004548 ORTHO05D005402 2.3e-80 302.8 216 70.4
TPR.G38962 Trifolium pratense HOM05D004548 ORTHO05D005402 3.0e-80 302.4 217 69.1
CARHR020520 Cardamine hirsuta HOM05D004548 ORTHO05D005402 5.0e-80 301.6 206 72.8
Medtr6g084920 Medicago truncatula HOM05D004548 ORTHO05D005402 5.0e-80 301.6 217 69.1
FAN17G2493 Fragaria x ananassa HOM05D004548 ORTHO05D005402 8.6e-80 300.8 280 57.5
AT1G20050 Arabidopsis thaliana HOM05D004548 ORTHO05D005402 1.9e-79 299.7 219 68.0
BcaB07g32020 Brassica carinata HOM05D004548 ORTHO05D005402 1.6e-78 296.6 220 70.5
Glyma.09G186900 Glycine max HOM05D004548 ORTHO05D005402 2.1e-78 296.2 218 66.1
BraA06t24724Z Brassica rapa HOM05D004548 ORTHO05D005402 2.8e-78 295.8 221 66.5
ATR0665G198 Amborella trichopoda HOM05D004548 ORTHO05D005402 4.7e-78 295.0 211 66.4
TPR.G38981 Trifolium pratense HOM05D004548 ORTHO05D005402 3.4e-76 288.9 217 65.9
Glyma.09G186800 Glycine max HOM05D004548 ORTHO05D005402 4.4e-76 288.5 210 66.2
PGR119G0727 Punica granatum HOM05D004548 ORTHO05D005402 1.7e-75 286.6 223 62.8
Hund18283 Selenicereus undatus HOM05D004548 ORTHO05D005402 1.4e-74 283.5 209 63.2
AUR62013297 Chenopodium quinoa HOM05D004548 ORTHO05D005402 1.6e-73 280.0 206 62.1
BcaC05g25903 Brassica carinata HOM05D004548 ORTHO05D005402 8.6e-72 274.2 199 70.9
CSS0003180 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 1.9e-71 273.1 204 63.7
CSS0047688 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 1.9e-71 273.1 204 63.7
Nn3g16208 Nelumbo nucifera HOM05D004548 ORTHO05D005402 5.6e-71 271.6 167 80.2
BcaB03g14342 Brassica carinata HOM05D004548 ORTHO05D005402 7.3e-71 271.2 215 64.7
vmacro15975 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 7.3e-71 271.2 183 73.2
EL10Ac8g18737 Beta vulgaris HOM05D004548 ORTHO05D005402 2.1e-70 269.6 211 59.2
A06p16180 Brassica napus HOM05D004548 ORTHO05D005402 4.7e-70 268.5 198 68.2
SEGI_00448 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 1.1e-69 267.3 215 58.1
Zm00001eb334120 Zea mays HOM05D004548 ORTHO05D005402 1.1e-69 267.3 216 59.7
DCAR_019172 Daucus carota HOM05D004548 ORTHO05D005402 2.3e-69 266.2 156 80.1
CDE04G3258 Ceratophyllum demersum HOM05D004548 ORTHO05D005402 4.0e-69 265.4 209 60.8
BcaB03g14411 Brassica carinata HOM05D004548 ORTHO05D005402 5.2e-69 265.0 215 64.2
Os01g0103600 Oryza sativa ssp. japonica HOM05D004548 ORTHO05D005402 6.8e-69 264.6 214 62.6
arahy.Tifrunner.gnm1.ann1.Y6E3CC Arachis hypogaea HOM05D004548 ORTHO05D005402 1.3e-67 260.4 217 62.2
Haze_12526 Corylus avellana HOM05D004548 ORTHO05D005402 1.7e-67 260.0 219 61.2
arahy.Tifrunner.gnm1.ann1.L8Q3U6 Arachis hypogaea HOM05D004548 ORTHO05D005402 2.9e-67 259.2 204 64.7
Ca_25508_v3 Cicer arietinum L. HOM05D004548 ORTHO05D005402 8.3e-67 257.7 184 70.7
TPR.G21858 Trifolium pratense HOM05D004548 ORTHO05D005402 4.6e-65 251.9 175 72.0
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 8.6e-64 247.7 171 70.2
BcaC05g25905 Brassica carinata HOM05D004548 ORTHO05D005402 1.1e-63 247.3 207 65.2
vmacro04885 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 1.2e-62 243.8 223 59.6
AUR62011188 Chenopodium quinoa HOM05D004548 ORTHO05D005402 4.7e-62 241.9 171 64.3
SMO119G0501 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 2.3e-61 239.6 214 56.5
Mapoly0026s0030 Marchantia polymorpha HOM05D004548 ORTHO05D005402 4.4e-60 235.3 212 55.2
Ciclev10002435m.g Citrus clementina HOM05D004548 ORTHO05D005402 7.6e-60 234.6 211 55.0
Pp3c9_19720 Physcomitrium patens HOM05D004548 ORTHO05D005402 9.9e-60 234.2 211 56.4
Zm00001eb126960 Zea mays HOM05D004548 ORTHO05D005402 1.7e-59 233.4 219 53.4
Ciclev10029254m.g Citrus clementina HOM05D004548 ORTHO05D005402 6.4e-59 231.5 204 56.9
AagrBONN_evm.TU.Sc2ySwM_228.5752 Anthoceros agrestis HOM05D004548 ORTHO05D005402 1.1e-58 230.7 211 51.7
Psat1g039080 Pisum sativum HOM05D004548 ORTHO05D005402 1.9e-58 229.9 162 69.8
MD16G1144400 Malus domestica HOM05D004548 ORTHO05D005402 1.2e-57 227.3 165 71.5
C05p18540 Brassica napus HOM05D004548 ORTHO05D005402 5.1e-56 221.9 218 56.4
Cfa009469 Carpinus fangiana HOM05D004548 ORTHO05D005402 2.5e-55 219.5 150 71.3
EL10Ac8g18743 Beta vulgaris HOM05D004548 ORTHO05D005402 6.2e-54 214.9 210 46.2
SMO196G0274 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 2.0e-52 209.9 202 49.5
Sabra03G0116700 Salix brachista HOM05D004548 ORTHO05D005402 3.4e-52 209.1 216 52.8
BcaC05g25899 Brassica carinata HOM05D004548 ORTHO05D005402 1.4e-50 203.8 218 53.2
Ciclev10006027m.g Citrus clementina HOM05D004548 ORTHO05D005402 9.0e-45 184.5 152 52.6
Cre12.g557900 Chlamydomonas reinhardtii HOM05D004548 ORTHO05D005402 3.4e-44 182.6 216 42.1
EL10Ac8g18745 Beta vulgaris HOM05D004548 ORTHO05D005402 1.9e-42 176.8 210 40.0
SEGI_03556 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 4.2e-42 175.6 157 59.2
Ah.14g079290 Amaranthus hybridus HOM05D004548 ORTHO05D005402 1.0e-40 171.0 203 45.3
Ah.09g224580 Amaranthus hybridus HOM05D004548 ORTHO05D005402 6.6e-40 168.3 210 44.8
EL10Ac8g18747 Beta vulgaris HOM05D004548 ORTHO05D005402 8.7e-40 167.9 314 31.8
Mapoly0072s0066 Marchantia polymorpha HOM05D004548 ORTHO05D005402 2.8e-38 162.9 214 42.1
Potri.001G070301 Populus trichocarpa HOM05D004548 ORTHO05D005402 1.8e-37 160.2 96 75.0
Oeu051508.1 Olea europaea HOM05D004548 ORTHO05D005402 3.1e-37 159.5 95 78.9
Sabra01G0049300 Salix brachista HOM05D004548 ORTHO05D000739 3.1e-37 159.5 103 78.6
Actinidia09588 Actinidia chinensis HOM05D004548 ORTHO05D005402 6.9e-37 158.3 133 62.4
EL10Ac8g18746 Beta vulgaris HOM05D004548 ORTHO05D005402 1.6e-33 147.1 203 39.4
EL10Ac8g18744 Beta vulgaris HOM05D004548 ORTHO05D005402 7.9e-33 144.8 203 38.9
FAN12G3080 Fragaria x ananassa HOM05D004548 ORTHO05D005402 1.3e-30 137.5 182 46.2
Nitab4.5_0000038g0240 Nicotiana tabacum HOM05D004548 ORTHO05D005402 1.4e-29 134.0 90 73.3
CBR_g55168 Chara braunii HOM05D004548 ORTHO05D005402 4.5e-28 129.0 129 47.3
COL.COLO4_05696 Corchorus olitorius HOM05D004548 ORTHO05D005402 6.0e-25 118.6 91 67.0
Psat5g295440 Pisum sativum HOM05D004548 ORTHO05D005402 7.9e-25 118.2 89 60.7
Oeu018311.3 Olea europaea HOM05D004548 ORTHO05D005402 2.5e-18 96.7 213 34.3
MELO3C030902.2 Cucumis melo HOM05D004548 ORTHO05D005402 9.7e-15 84.7 85 49.4
Ah.16g106680 Amaranthus hybridus HOM05D004548 ORTHO05D005402 2.8e-14 83.2 65 63.1
Oeu018323.1 Olea europaea HOM05D004548 ORTHO05D005402 1.7e-11 73.9 51 68.6
Cfa019956 Carpinus fangiana HOM05D004548 ORTHO05D005402 7.2e-10 68.6 49 65.3
Cpa.g.sc38.60 Carica papaya HOM05D004548 ORTHO05D005402 4.4e-07 59.3 42 66.7


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