Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 3.3e-69 265.0 141 100.0
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.3e-25 120.2 131 55.7
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 3.0e-22 109.0 168 43.5
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 3.0e-22 109.0 134 50.7
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 6.7e-22 107.8 139 44.6
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 1.5e-21 106.7 152 42.1
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 6.3e-20 101.3 157 43.3
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 1.8e-19 99.8 134 44.8
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 4.1e-19 98.6 147 44.2
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 5.3e-19 98.2 129 45.0
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 5.9e-18 94.7 143 44.1
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 5.9e-18 94.7 149 43.0
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 1.0e-17 94.0 157 39.5
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 1.3e-17 93.6 148 40.5
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 1.3e-17 93.6 150 41.3
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.9e-16 89.7 144 43.8
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.9e-16 89.7 144 43.8
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 4.2e-16 88.6 149 39.6
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 5.5e-16 88.2 142 37.3
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 7.2e-16 87.8 138 45.7
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 7.2e-16 87.8 160 38.1
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 9.4e-16 87.4 147 38.8
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.6e-15 86.7 158 36.7
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.1e-15 86.3 134 43.3
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.7e-15 85.9 162 39.5
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.7e-15 85.9 159 39.6
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 4.7e-15 85.1 147 36.7
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 6.1e-15 84.7 148 41.2
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 1.0e-14 84.0 140 40.0
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 1.0e-14 84.0 156 37.2
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 1.0e-14 84.0 159 37.7
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.4e-14 83.6 165 36.4
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.4e-14 83.6 143 38.5
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.8e-14 83.2 132 43.2
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 3.0e-14 82.4 153 37.3
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 3.0e-14 82.4 152 40.1
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 3.9e-14 82.0 143 38.5
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.9e-14 82.0 141 40.4
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.2e-14 81.6 138 40.6
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 5.2e-14 81.6 144 39.6
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 6.7e-14 81.3 150 39.3
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.7e-14 81.3 158 36.7
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 8.8e-14 80.9 155 37.4
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 8.8e-14 80.9 141 39.7
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 8.8e-14 80.9 152 37.5
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.1e-13 80.5 149 35.6
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 1.1e-13 80.5 167 34.7
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.5e-13 80.1 165 34.5
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.0e-13 79.7 138 39.9
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.0e-13 79.7 161 36.0
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.6e-13 79.3 143 39.2
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.6e-13 79.3 163 35.6
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.6e-13 79.3 146 37.0
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 3.3e-13 79.0 142 39.4
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 4.4e-13 78.6 164 35.4
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 4.4e-13 78.6 159 34.6
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 4.4e-13 78.6 153 37.9
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 4.4e-13 78.6 165 32.7
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 4.4e-13 78.6 151 37.1
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 5.7e-13 78.2 161 36.6
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 5.7e-13 78.2 135 35.6
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 7.4e-13 77.8 159 37.7
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 7.4e-13 77.8 149 38.9
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 7.4e-13 77.8 156 35.3
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 7.4e-13 77.8 156 35.3
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 9.7e-13 77.4 156 37.8
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.3e-12 77.0 159 34.0
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 1.3e-12 77.0 100 46.0
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 1.7e-12 76.6 157 36.9
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 2.2e-12 76.3 160 34.4
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.2e-12 76.3 153 35.3
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 2.8e-12 75.9 142 37.3
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 2.8e-12 75.9 167 31.7
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 2.8e-12 75.9 172 36.0
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.8e-12 75.9 159 33.3
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 4.8e-12 75.1 130 40.8
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.1e-11 73.9 148 35.8
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 1.4e-11 73.6 134 35.8
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 1.4e-11 73.6 152 34.2
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 1.8e-11 73.2 163 33.7
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 1.8e-11 73.2 127 39.4
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 1.8e-11 73.2 144 36.1
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 1.8e-11 73.2 153 37.3
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 2.4e-11 72.8 160 33.8
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.4e-11 72.8 170 32.9
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 2.4e-11 72.8 134 39.6
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.1e-11 72.4 101 44.6
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 3.1e-11 72.4 158 32.3
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 4.1e-11 72.0 141 36.2
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 5.3e-11 71.6 135 37.8
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 5.3e-11 71.6 150 34.0
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 7.0e-11 71.2 164 36.6
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 9.1e-11 70.9 139 37.4
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 9.1e-11 70.9 135 40.7
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 9.1e-11 70.9 135 40.7
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 9.1e-11 70.9 104 40.4
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 1.2e-10 70.5 88 44.3
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 1.2e-10 70.5 93 44.1
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 1.6e-10 70.1 118 39.0
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 2.0e-10 69.7 138 42.0
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 2.0e-10 69.7 138 42.0
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 2.0e-10 69.7 171 31.6
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 3.5e-10 68.9 147 35.4
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 4.5e-10 68.6 135 37.0
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 4.5e-10 68.6 134 38.1
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 7.7e-10 67.8 130 35.4
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 1.0e-09 67.4 154 33.1
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 1.3e-09 67.0 168 32.1
Zm00001eb432720 Zea mays HOM05D005211 ORTHO05D006148 1.3e-09 67.0 170 32.9
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 1.7e-09 66.6 158 34.8
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 2.2e-09 66.2 167 34.1
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 2.9e-09 65.9 117 36.8
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 3.8e-09 65.5 142 38.0
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 5.0e-09 65.1 142 37.3
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 6.5e-09 64.7 94 40.4
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 8.5e-09 64.3 164 32.3
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.1e-08 63.9 101 39.6
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.5e-08 63.5 72 47.2
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.5e-08 63.5 133 36.1
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 1.9e-08 63.2 144 36.8
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 1.9e-08 63.2 126 36.5
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.5e-08 62.8 144 34.0
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 3.2e-08 62.4 133 35.3
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 3.2e-08 62.4 133 35.3
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 3.2e-08 62.4 116 37.9
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 3.2e-08 62.4 149 34.2
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 4.2e-08 62.0 44 61.4
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 4.2e-08 62.0 93 44.1
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 4.2e-08 62.0 84 42.9
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 7.2e-08 61.2 42 64.3
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 9.4e-08 60.8 133 36.1
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 1.2e-07 60.5 141 34.0
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 1.2e-07 60.5 134 35.1
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 1.2e-07 60.5 117 35.0
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 1.2e-07 60.5 134 35.1
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 1.2e-07 60.5 117 35.0
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 4.7e-07 58.5 123 35.8
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 4.0e-06 55.5 38 57.9


User provided reference genes

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