Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold77G25259 Striga asiatica HOM05D044032 ORTHO05D000388 2.1e-88 328.9 162 100.0
SGA_v2.0_scaffold95G28720 Striga asiatica HOM05D044032 ORTHO05D401899 4.0e-10 68.9 57 70.2
MSTRG.20665 Avicennia marina HOM05D000562 ORTHO05D000388 7.5e-09 64.7 49 61.2
MSTRG.4955 Avicennia marina HOM05D000562 ORTHO05D000388 2.2e-08 63.2 43 65.1
MSTRG.4958 Avicennia marina HOM05D000562 ORTHO05D000388 4.9e-08 62.0 43 62.8
MSTRG.17115 Avicennia marina HOM05D000562 ORTHO05D000388 6.3e-08 61.6 43 62.8
Oeu034856.1 Olea europaea HOM05D000562 ORTHO05D000388 1.4e-07 60.5 43 60.5
MSTRG.4956 Avicennia marina HOM05D000562 ORTHO05D000388 1.8e-07 60.1 43 60.5
MSTRG.4954 Avicennia marina HOM05D000562 ORTHO05D000388 3.1e-07 59.3 43 60.5
Nitab4.5_0000204g0120 Nicotiana tabacum HOM05D000562 ORTHO05D000388 4.1e-07 58.9 43 58.1
SalBow4G1438 Salvia bowleyana HOM05D000562 ORTHO05D000388 9.2e-07 57.8 49 61.2
Oeu012018.1 Olea europaea HOM05D000562 ORTHO05D000388 2.0e-06 56.6 43 58.1
Oeu037420.1 Olea europaea HOM05D000562 ORTHO05D000388 2.7e-06 56.2 43 58.1
Glyma.03G105400 Glycine max HOM05D000562 ORTHO05D000388 4.5e-06 55.5 43 53.5
Migut.O00887 Erythranthe guttata HOM05D000562 ORTHO05D000388 5.9e-06 55.1 33 75.8
SGA_v2.0_scaffold52G19262 Striga asiatica HOM05D000562 ORTHO05D000388 5.9e-06 55.1 44 56.8
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 7.7e-06 54.7 94 46.8
Psat4g222160 Pisum sativum HOM05D000562 ORTHO05D000388 7.7e-06 54.7 43 55.8
Psat4g222200 Pisum sativum HOM05D000562 ORTHO05D000388 7.7e-06 54.7 43 55.8


User provided reference genes

Program Settings