Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 6.3e-128 460.7 218 100.0
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 3.3e-44 182.6 183 50.8
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 2.0e-41 173.3 122 64.8
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 7.6e-41 171.4 209 44.5
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 2.2e-40 169.9 207 45.4
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 1.2e-38 164.1 216 42.6
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 2.2e-35 153.3 219 42.5
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 6.3e-35 151.8 207 41.1
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 1.8e-34 150.2 117 60.7
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 2.4e-34 149.8 113 57.5
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 2.4e-34 149.8 121 55.4
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 4.1e-34 149.1 208 41.8
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 2.0e-33 146.7 121 54.5
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 2.0e-33 146.7 121 54.5
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 2.6e-33 146.4 92 66.3
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 1.3e-32 144.1 177 45.2
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 1.3e-32 144.1 89 65.2
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 2.2e-32 143.3 172 43.0
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.1e-31 141.0 179 42.5
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 1.1e-31 141.0 99 63.6
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 2.5e-31 139.8 105 60.0
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 1.2e-30 137.5 119 52.9
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.6e-30 137.1 173 42.8
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 2.7e-30 136.3 93 63.4
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 2.7e-30 136.3 118 53.4
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 3.6e-30 136.0 120 50.8
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.8e-29 133.7 89 62.9
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 8.8e-29 131.3 215 37.7
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 1.5e-28 130.6 84 64.3
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 7.4e-28 128.3 203 37.9
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 2.2e-27 126.7 123 46.3
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 4.8e-27 125.6 199 39.7
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 8.2e-27 124.8 185 42.2
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 2.4e-26 123.2 112 50.0
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 4.1e-26 122.5 84 60.7
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 4.1e-26 122.5 111 51.4
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 6.9e-26 121.7 199 37.2
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 1.5e-25 120.6 144 45.1
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 1.5e-25 120.6 113 47.8
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 2.0e-25 120.2 167 44.3
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 3.4e-25 119.4 155 43.2
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 4.5e-25 119.0 100 56.0
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 7.7e-25 118.2 172 39.5
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 1.3e-24 117.5 169 38.5
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 2.9e-24 116.3 84 60.7
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 6.5e-24 115.2 94 54.3
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 4.2e-23 112.5 84 56.0
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 4.2e-23 112.5 115 47.0
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 5.5e-23 112.1 122 46.7
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 7.2e-23 111.7 82 59.8
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 9.4e-23 111.3 84 53.6
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 9.4e-23 111.3 175 40.0
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 2.1e-22 110.2 84 53.6
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 2.1e-22 110.2 186 39.2
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 3.9e-21 105.9 95 51.6
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 5.2e-21 105.5 87 51.7
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 2.6e-20 103.2 83 53.0
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 4.4e-20 102.4 80 52.5
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 4.4e-20 102.4 83 51.8
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 5.7e-20 102.1 84 48.8
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 1.7e-19 100.5 81 46.9
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.8e-19 99.8 83 50.6
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 2.8e-19 99.8 82 54.9
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 1.4e-18 97.4 83 49.4
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 3.5e-17 92.8 105 39.0
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 5.9e-17 92.0 70 57.1
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 5.9e-17 92.0 110 37.3
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 2.9e-16 89.7 83 44.6
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.9e-15 87.0 74 48.6
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 1.9e-15 87.0 82 47.6
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 3.2e-15 86.3 81 45.7
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 7.2e-15 85.1 52 63.5
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 9.4e-15 84.7 81 46.9
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 9.4e-15 84.7 178 35.4
Cre02.g091193 Chlamydomonas reinhardtii HOM05D007737 ORTHO05D009754 2.1e-14 83.6 64 54.7
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 4.0e-13 79.3 104 35.6
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 1.2e-12 77.8 76 44.7
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.5e-12 77.4 47 70.2
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 3.3e-12 76.3 76 43.4
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 3.3e-12 76.3 76 43.4
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 4.4e-12 75.9 84 38.1
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 7.5e-12 75.1 111 32.4
PRCOL_00000087 Prasinoderma coloniale HOM05D003082 ORTHO05D003497 2.8e-11 73.2 72 45.8
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 6.3e-11 72.0 91 36.3
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 8.2e-11 71.6 111 31.5
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 8.2e-11 71.6 76 40.8
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 1.8e-10 70.5 91 35.2
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 1.2e-09 67.8 76 38.2
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 1.0e-08 64.7 85 42.4
EL10Ac1g00699 Beta vulgaris HOM05D007737 ORTHO05D009754 1.0e-08 64.7 57 52.6
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 1.5e-07 60.8 34 70.6
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 1.5e-07 60.8 44 63.6
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 2.7e-06 56.6 33 63.6


User provided reference genes

Program Settings