Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold778G53583 Striga asiatica HOM05D008624 ORTHO05D011001 1.6e-131 472.6 219 100.0
SGA_v2.0_scaffold51G18794 Striga asiatica HOM05D008624 ORTHO05D011001 8.4e-72 274.2 327 47.4
SGA_v2.0_scaffold51G18798 Striga asiatica HOM05D008624 ORTHO05D011001 4.3e-68 261.9 315 46.3
SGA_v2.0_scaffold51G18799 Striga asiatica HOM05D008624 ORTHO05D011001 1.4e-66 256.9 217 59.4
SGA_v2.0_scaffold17G07912 Striga asiatica HOM05D008624 ORTHO05D011001 1.9e-63 246.5 212 62.3
SGA_v2.0_scaffold17G07915 Striga asiatica HOM05D008624 ORTHO05D011001 5.7e-60 235.0 294 49.0
FAN07G0473 Fragaria x ananassa HOM05D008624 ORTHO05D011001 2.1e-22 110.2 123 41.5
FAN07G2663 Fragaria x ananassa HOM05D008624 ORTHO05D011001 3.6e-22 109.4 145 35.9
FvH4_4g24132 Fragaria vesca HOM05D008624 ORTHO05D011001 1.0e-21 107.8 115 41.7
FAN07G0895 Fragaria x ananassa HOM05D008624 ORTHO05D011001 1.4e-21 107.5 230 32.6
FvH4_4g36141 Fragaria vesca HOM05D008624 ORTHO05D011001 3.0e-21 106.3 125 42.4
FAN12G1209 Fragaria x ananassa HOM05D008624 ORTHO05D011001 5.2e-21 105.5 125 42.4
FAN12G3911 Fragaria x ananassa HOM05D008624 ORTHO05D011001 8.8e-21 104.8 116 41.4
FvH4_4g36220 Fragaria vesca HOM05D008624 ORTHO05D011001 1.5e-20 104.0 178 33.7
FAN12G1756 Fragaria x ananassa HOM05D008624 ORTHO05D011001 2.8e-19 99.8 166 33.7
RcHm_v2.0_Chr5g0058501 Rosa chinensis HOM05D008624 ORTHO05D011001 2.8e-19 99.8 200 33.0
FAN12G1889 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-18 97.8 129 36.4
FAN22G0543 Fragaria x ananassa HOM05D008624 ORTHO05D011001 1.1e-18 97.8 137 36.5
FAN15G1232 Fragaria x ananassa HOM05D008624 ORTHO05D011001 2.4e-18 96.7 202 34.2
FAN17G0739 Fragaria x ananassa HOM05D008624 ORTHO05D011001 2.4e-18 96.7 106 40.6
SGA_v2.0_scaffold475G52115 Striga asiatica HOM05D031175 ORTHO05D030682 2.4e-18 96.7 209 34.4
FAN12G4261 Fragaria x ananassa HOM05D008624 ORTHO05D011001 5.4e-18 95.5 127 40.2
FvH4_4g12110 Fragaria vesca HOM05D008624 ORTHO05D011001 9.1e-18 94.7 121 40.5
FAN20G2662 Fragaria x ananassa HOM05D008624 ORTHO05D011001 1.2e-17 94.4 202 33.2
FAN15G3060 Fragaria x ananassa HOM05D008624 ORTHO05D011001 5.0e-16 89.0 130 38.5
SGA_v2.0_scaffold418G51272 Striga asiatica HOM05D031175 ORTHO05D030682 1.5e-15 87.4 89 49.4
SGA_v2.0_scaffold475G52112 Striga asiatica HOM05D031175 ORTHO05D030682 1.5e-15 87.4 89 49.4
FAN15G1633 Fragaria x ananassa HOM05D008624 ORTHO05D011001 2.5e-15 86.7 112 41.1
FAN15G2936 Fragaria x ananassa HOM05D008624 ORTHO05D011001 4.2e-15 85.9 112 41.1
FAN15G3684 Fragaria x ananassa HOM05D008624 ORTHO05D011001 4.2e-15 85.9 112 41.1
FvH4_2g07000 Fragaria vesca HOM05D008624 ORTHO05D011001 1.4e-13 80.9 112 40.2
FAN06G0988 Fragaria x ananassa HOM05D008624 ORTHO05D011001 1.4e-13 80.9 121 36.4
FAN06G4950 Fragaria x ananassa HOM05D008624 ORTHO05D011001 1.2e-09 67.8 81 38.3
SGA_v2.0_scaffold350G49626 Striga asiatica HOM05D031175 ORTHO05D030682 5.9e-09 65.5 118 37.3


User provided reference genes

Program Settings