Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold770G53576 Striga asiatica HOM05D028093 ORTHO05D404801 8.3e-108 393.7 192 100.0
SGA_v2.0_scaffold452G51837 Striga asiatica HOM05D028093 ORTHO05D002873 1.5e-64 250.0 219 66.2
SGA_v2.0_scaffold326G48717 Striga asiatica HOM05D028093 ORTHO05D002873 4.8e-63 245.0 223 65.0
SGA_v2.0_scaffold63G21717 Striga asiatica HOM05D028093 ORTHO05D006255 1.8e-54 216.5 180 66.7
SGA_v2.0_scaffold62G21483 Striga asiatica HOM05D002426 ORTHO05D002873 3.9e-41 172.2 140 68.6
SGA_v2.0_scaffold17G08005 Striga asiatica HOM05D000381 ORTHO05D001117 2.9e-12 76.3 97 49.5
Rhsim13G0189600 Rhododendron simsii HOM05D000381 ORTHO05D001117 8.3e-07 58.2 95 36.8
Gohir.A10G036600 Gossypium hirsutum HOM05D000381 ORTHO05D001117 1.1e-06 57.8 93 39.8
CAN.G370.81 Capsicum annuum HOM05D000381 ORTHO05D001117 1.9e-06 57.0 109 33.9
Gohir.D05G157500 Gossypium hirsutum HOM05D000381 ORTHO05D001117 1.9e-06 57.0 96 37.5
Gorai.009G162000 Gossypium raimondii HOM05D000381 ORTHO05D001117 1.9e-06 57.0 96 37.5
Eucgr.D00485 Eucalyptus grandis HOM05D000381 ORTHO05D001117 2.4e-06 56.6 97 37.1
FvH4_3g07720 Fragaria vesca HOM05D000381 ORTHO05D001117 2.4e-06 56.6 90 35.6
TAR629G3111 Trochodendron aralioides HOM05D000381 ORTHO05D001117 4.1e-06 55.8 86 40.7
TAR627G0023 Trochodendron aralioides HOM05D000381 ORTHO05D001117 5.4e-06 55.5 92 38.0
TAR627G0986 Trochodendron aralioides HOM05D000381 ORTHO05D001117 5.4e-06 55.5 92 38.0
Duzib192G0465 Durio zibethinus HOM05D000381 ORTHO05D001117 9.2e-06 54.7 96 36.5
QL05p047433 Quercus lobata HOM05D000381 ORTHO05D001117 9.2e-06 54.7 94 35.1


User provided reference genes

Program Settings