Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold76G25127 Striga asiatica HOM05D000003 ORTHO05D000004 4.1e-81 304.7 154 100.0
SGA_v2.0_scaffold55G19740 Striga asiatica HOM05D000003 ORTHO05D000004 6.6e-15 84.7 102 46.1
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 1.5e-14 83.6 99 47.5
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 4.3e-14 82.0 102 43.1
SGA_v2.0_scaffold56G19930 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-11 73.9 98 44.9
SGA_v2.0_scaffold113G31740 Striga asiatica HOM05D000003 ORTHO05D000004 4.5e-11 72.0 70 47.1
SGA_v2.0_scaffold9G04768 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-10 70.5 70 45.7
SGA_v2.0_scaffold409G51103 Striga asiatica HOM05D000003 ORTHO05D000006 2.2e-10 69.7 89 41.6
Aa31LG11G5950 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-10 69.3 101 34.7
Aa31LG3G4270 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.9e-10 68.6 98 37.8
Aa31LG6G11540 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-09 67.4 97 38.1
Prupe.4G011200 Prunus persica HOM05D000003 ORTHO05D000004 1.9e-09 66.6 99 37.4
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-09 66.2 98 35.7
Rhsim04G0067000 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.4e-09 66.2 97 40.2
Rhsim10G0093500 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.4e-09 66.2 97 41.2
SGA_v2.0_scaffold1G00690 Striga asiatica HOM05D000003 ORTHO05D000004 3.2e-09 65.9 98 38.8
CANSAT78G2022 Cannabis sativa HOM05D000003 ORTHO05D000004 4.2e-09 65.5 99 36.4
Prupe.6G123900 Prunus persica HOM05D000003 ORTHO05D000004 4.2e-09 65.5 99 36.4
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 4.2e-09 65.5 101 37.6
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.5e-09 65.1 98 34.7
Rhsim05G0149000 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.1e-09 64.7 98 38.8
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 7.1e-09 64.7 96 36.5
Aa31sc1394G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.3e-09 64.3 98 33.7
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.3e-09 64.3 97 40.2
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-08 63.9 96 37.5
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.6e-08 63.5 97 36.1
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.6e-08 63.5 97 35.1
Aa31LG11G9070 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-08 63.2 98 33.7
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.1e-08 63.2 66 47.0
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-08 63.2 96 35.4
Rhsim01G0161700 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.7e-08 62.8 97 35.1
RhsimUnG0010200 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.7e-08 62.8 98 38.8
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.5e-08 62.4 98 35.7
Aa31LG3G6650 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.5e-08 62.4 98 33.7
Aa31LG9G3670 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.6e-08 62.0 100 38.0
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-08 62.0 97 36.1
SGA_v2.0_scaffold301G47800 Striga asiatica HOM05D000003 ORTHO05D000006 4.6e-08 62.0 90 41.1
Rhsim01G0109500 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.0e-08 61.6 97 36.1
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 6.0e-08 61.6 96 33.3
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.9e-08 61.2 98 34.7
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.9e-08 61.2 105 34.3
CANSAT21G1305 Cannabis sativa HOM05D000003 ORTHO05D000006 7.9e-08 61.2 98 36.7
RcHm_v2.0_Chr1g0344541 Rosa chinensis HOM05D000003 ORTHO05D000004 7.9e-08 61.2 97 34.0
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 7.9e-08 61.2 58 53.4
FvH4_4g06792 Fragaria vesca HOM05D000003 ORTHO05D000006 1.0e-07 60.8 98 36.7
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-07 60.8 96 36.5
CANSAT01G1668 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-07 60.5 98 35.7
Sopen11g013960 Solanum pennellii HOM05D000003 ORTHO05D000006 1.3e-07 60.5 96 32.3
Aa31LG2G15580 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-07 60.1 98 33.7
CANSAT11G2175 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-07 59.7 97 36.1
FvH4_5g31282 Fragaria vesca HOM05D000003 ORTHO05D000004 2.3e-07 59.7 89 36.0
SEGI_26678 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.3e-07 59.7 100 38.0
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 2.3e-07 59.7 102 33.3
CANSAT56G3772 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-07 59.3 100 38.0
CANSAT78G2353 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-07 59.3 99 35.4
QL01p039135 Quercus lobata HOM05D000003 ORTHO05D000006 3.0e-07 59.3 99 33.3
Aa31sc734G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.1e-07 58.5 98 33.7
Sabra02G0111100 Salix brachista HOM05D000003 ORTHO05D000006 5.1e-07 58.5 97 36.1
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.7e-07 58.2 97 30.9
Aa31sc25G170 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.7e-07 58.2 98 32.7
Aa31sc594G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.7e-07 58.2 101 31.7
Aqoxy4G01483 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 6.7e-07 58.2 67 37.3
PSO675G4188 Papaver somniferum HOM05D000003 ORTHO05D000004 6.7e-07 58.2 97 35.1
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 6.7e-07 58.2 97 36.1
Atru.chr1.2485 Acer truncatum HOM05D000003 ORTHO05D000004 8.7e-07 57.8 104 35.6
CANSAT11G1930 Cannabis sativa HOM05D000003 ORTHO05D009135 8.7e-07 57.8 95 35.8
Rhsim08G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.7e-07 57.8 96 34.4
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.7e-07 57.8 98 36.7
TWI12G0720 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.7e-07 57.8 99 37.4
Atru.chr10.150 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 57.4 98 34.7
CANSAT11G2388 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.4 105 35.2
CANSAT35G0741 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.4 95 34.7
CANSAT80G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.4 103 35.0
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 1.1e-06 57.4 99 33.3
CSS0044575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-06 57.0 98 34.7
PSO675G7259 Papaver somniferum HOM05D000003 ORTHO05D000006 1.5e-06 57.0 128 32.8
SGA_v2.0_scaffold9G04700 Striga asiatica HOM05D000003 ORTHO05D000006 1.5e-06 57.0 78 39.7
CANSAT35G1809 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 56.6 97 36.1
Sopen00g001110 Solanum pennellii HOM05D000003 ORTHO05D000007 1.9e-06 56.6 99 30.3
CANSAT78G0730 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-06 56.2 103 34.0
CANSAT78G2405 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-06 56.2 95 35.8
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.5e-06 56.2 98 34.7
Aa31LG5G23430 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.3e-06 55.8 98 30.6
CANSAT78G1763 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 55.8 97 35.1
PSO339G5170 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-06 55.8 102 31.4
PSO675G2199 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-06 55.8 96 34.4
QL10p024010 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 55.8 101 33.7
Rhsim08G0131400 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.3e-06 55.8 98 35.7
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 3.3e-06 55.8 97 35.1
Atru.chr2.1640 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-06 55.5 96 36.5
Aqoxy5G01906 Aquilegia oxysepala HOM05D002562 ORTHO05D002808 4.3e-06 55.5 99 35.4
CANSAT64G2324 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-06 55.5 66 42.4
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-06 55.5 97 35.1
Aa31LG11G4970 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.6e-06 55.1 68 39.7
Aa31LG7G12870 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.6e-06 55.1 96 32.3
Aqoxy5G01605 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.6e-06 55.1 66 36.4
CANSAT01G2163 Cannabis sativa HOM05D000003 ORTHO05D000126 5.6e-06 55.1 97 36.1
CANSAT11G1313 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-06 55.1 99 34.3
CANSAT21G1448 Cannabis sativa HOM05D000003 ORTHO05D000006 5.6e-06 55.1 98 34.7
FvH4_6g19251 Fragaria vesca HOM05D000003 ORTHO05D000004 5.6e-06 55.1 100 31.0
Rhsim01G0140300 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.6e-06 55.1 97 33.0
Sopen03g011820 Solanum pennellii HOM05D000003 ORTHO05D000004 5.6e-06 55.1 68 42.6
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 7.4e-06 54.7 96 34.4
Aqoxy5G03270 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.4e-06 54.7 53 45.3
BolC4t22153H Brassica oleracea HOM05D000003 ORTHO05D000006 7.4e-06 54.7 96 37.5
PSO384G0430 Papaver somniferum HOM05D000003 ORTHO05D000004 7.4e-06 54.7 99 32.3
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 7.4e-06 54.7 97 34.0
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 7.4e-06 54.7 97 34.0
Atru.chr13.2319 Acer truncatum HOM05D000003 ORTHO05D000006 9.6e-06 54.3 76 38.2
Lj2g0023446 Lotus japonicus HOM05D000003 ORTHO05D000004 9.6e-06 54.3 98 29.6
PSO063G2062 Papaver somniferum HOM05D000003 ORTHO05D000006 9.6e-06 54.3 96 35.4
Rhsim02G0125400 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.6e-06 54.3 98 31.6
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 9.6e-06 54.3 70 38.6


User provided reference genes

Program Settings