Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold76G25043 Striga asiatica HOM05D005322 ORTHO05D006746 0.0e+00 1078.2 569 100.0
MSTRG.8297 Avicennia marina HOM05D005322 ORTHO05D006746 3.9e-113 412.9 612 45.4
Migut.F01569 Erythranthe guttata HOM05D005322 ORTHO05D006746 2.2e-111 407.1 598 47.5
Oeu050977.1 Olea europaea HOM05D005322 ORTHO05D006746 4.2e-83 313.2 599 41.4
Oeu030825.1 Olea europaea HOM05D005322 ORTHO05D006746 3.6e-74 283.5 441 45.4
Dinv36981 Davidia involucrata HOM05D005322 ORTHO05D006746 6.6e-68 262.7 445 40.9
SalBow6G3962 Salvia bowleyana HOM05D005322 ORTHO05D006746 2.9e-63 247.3 515 37.5
CSS0048225 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 1.1e-62 245.4 357 44.8
Rhsim07G0215300 Rhododendron simsii HOM05D005322 ORTHO05D006746 2.1e-61 241.1 307 46.6
CAN.G179.11 Capsicum annuum HOM05D005322 ORTHO05D006746 1.1e-59 235.3 391 40.9
Hma1.2p1_0080F.1_g042150 Hydrangea macrophylla HOM05D005322 ORTHO05D006746 1.6e-58 231.5 574 34.5
Sopen01g030500 Solanum pennellii HOM05D005322 ORTHO05D006746 1.1e-57 228.8 400 41.2
TAR381G1522 Trochodendron aralioides HOM05D005322 ORTHO05D006746 2.3e-57 227.6 335 42.7
Cfa006826 Carpinus fangiana HOM05D005322 ORTHO05D006746 6.8e-57 226.1 427 37.9
Haze_03937 Corylus avellana HOM05D005322 ORTHO05D006746 6.8e-57 226.1 337 42.4
Lj5A206G51 Lonicera japonica HOM05D005322 ORTHO05D006746 3.4e-56 223.8 465 36.1
Solyc01g068540.3 Solanum lycopersicum HOM05D005322 ORTHO05D006746 4.4e-56 223.4 427 39.6
Manes.13G104500 Manihot esculenta HOM05D005322 ORTHO05D006746 9.9e-56 222.2 308 44.5
Gorai.003G035800 Gossypium raimondii HOM05D005322 ORTHO05D006746 1.3e-55 221.9 338 44.1
QL06p037497 Quercus lobata HOM05D005322 ORTHO05D006746 2.2e-55 221.1 295 44.7
Atru.chr3.1164 Acer truncatum HOM05D005322 ORTHO05D006746 1.1e-54 218.8 471 37.8
Duzib264G0018 Durio zibethinus HOM05D005322 ORTHO05D006746 1.4e-54 218.4 319 45.5
Manes.12G121000 Manihot esculenta HOM05D005322 ORTHO05D006746 1.4e-54 218.4 437 38.2
RcHm_v2.0_Chr2g0109931 Rosa chinensis HOM05D005322 ORTHO05D006746 1.9e-54 218.0 467 37.7
Atru.chr3.1145 Acer truncatum HOM05D005322 ORTHO05D006746 2.4e-54 217.6 471 37.8
CSS0043740 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 2.4e-54 217.6 599 33.4
Gohir.D03G034100 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.4e-54 217.6 319 43.6
Potri.006G280800 Populus trichocarpa HOM05D005322 ORTHO05D006746 2.4e-54 217.6 292 42.1
CANSAT11G0958 Cannabis sativa HOM05D005322 ORTHO05D006746 4.1e-54 216.9 475 35.4
Nn4g23001 Nelumbo nucifera HOM05D005322 ORTHO05D006746 4.1e-54 216.9 379 40.4
Lsat_1_v5_gn_2_82180 Lactuca sativa HOM05D005322 ORTHO05D006746 5.4e-54 216.5 578 33.2
Gohir.A11G049800 Gossypium hirsutum HOM05D005322 ORTHO05D006746 7.1e-54 216.1 318 45.9
CiPaw.07G042000 Carya illinoinensis HOM05D005322 ORTHO05D006746 9.2e-54 215.7 399 37.1
Nitab4.5_0002103g0070 Nicotiana tabacum HOM05D005322 ORTHO05D006746 1.6e-53 214.9 460 39.1
Nn5g29007 Nelumbo nucifera HOM05D005322 ORTHO05D006746 2.7e-53 214.2 398 41.5
CSS0004865 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 3.5e-53 213.8 590 33.4
Sed0015871 Sechium edule HOM05D005322 ORTHO05D006746 3.5e-53 213.8 402 40.3
Thecc.01G083200 Theobroma cacao HOM05D005322 ORTHO05D006746 1.0e-52 212.2 449 39.2
Potri.018G000700 Populus trichocarpa HOM05D005322 ORTHO05D006746 1.7e-52 211.5 342 40.1
ClCG01G018150 Citrullus lanatus HOM05D005322 ORTHO05D006746 3.9e-52 210.3 596 32.7
Gorai.007G058000 Gossypium raimondii HOM05D005322 ORTHO05D006746 3.9e-52 210.3 308 46.1
MD15G1306300 Malus domestica HOM05D005322 ORTHO05D006746 3.9e-52 210.3 458 37.8
Ciclev10026033m.g Citrus clementina HOM05D005322 ORTHO05D006746 8.6e-52 209.1 322 43.5
Gohir.D11G053300 Gossypium hirsutum HOM05D005322 ORTHO05D006746 1.1e-51 208.8 315 44.8
Cc07_g07800 Coffea canephora HOM05D005322 ORTHO05D006746 1.9e-51 208.0 283 48.8
HanXRQChr12g0355811 Helianthus annuus HOM05D005322 ORTHO05D006746 4.3e-51 206.8 299 42.5
Lj2g0022469 Lotus japonicus HOM05D005322 ORTHO05D006746 9.5e-51 205.7 365 39.7
CsaV3_6G044720 Cucumis sativus L. HOM05D005322 ORTHO05D006746 2.1e-50 204.5 586 34.3
Ah.02g129230 Amaranthus hybridus HOM05D005322 ORTHO05D006746 2.8e-50 204.1 298 43.0
Prupe.6G210300 Prunus persica HOM05D005322 ORTHO05D006746 2.8e-50 204.1 383 41.0
ECA232G1574 Erigeron canadensis HOM05D005322 ORTHO05D006746 3.6e-50 203.8 440 36.6
ECA238G4016 Erigeron canadensis HOM05D005322 ORTHO05D006746 3.6e-50 203.8 301 43.5
FAN28G0408 Fragaria x ananassa HOM05D005322 ORTHO05D006746 3.6e-50 203.8 450 36.2
Peaxi162Scf00309g00413 Petunia axillaris HOM05D005322 ORTHO05D006746 3.6e-50 203.8 370 41.1
TWI77G0556 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 3.6e-50 203.8 308 42.5
FvH4_1g18920 Fragaria vesca HOM05D005322 ORTHO05D006746 4.7e-50 203.4 589 32.4
FAN19G2338 Fragaria x ananassa HOM05D005322 ORTHO05D006746 4.7e-50 203.4 593 32.7
ECA238G0277 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.1e-49 202.2 424 37.5
TWI74G0553 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 1.4e-49 201.8 315 41.0
THA.LOC104807657 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 1.8e-49 201.4 376 38.0
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 2.4e-49 201.1 336 37.2
vmacro11204 Vaccinium macrocarpon HOM05D005322 ORTHO05D006746 4.0e-49 200.3 371 37.7
Cpa.g.sc129.20 Carica papaya HOM05D005322 ORTHO05D006746 6.8e-49 199.5 649 29.7
FAN23G1375 Fragaria x ananassa HOM05D005322 ORTHO05D006746 6.8e-49 199.5 424 37.3
Lalb_Chr05g0216181 Lupinus albus HOM05D005322 ORTHO05D006746 6.8e-49 199.5 432 35.9
AUR62002656 Chenopodium quinoa HOM05D005322 ORTHO05D006746 8.9e-49 199.1 336 39.6
Actinidia11927 Actinidia chinensis HOM05D005322 ORTHO05D006746 2.0e-48 198.0 327 41.6
Gohir.A02G146400 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.0e-48 198.0 274 45.3
Aqoxy5G02272 Aquilegia oxysepala HOM05D005322 ORTHO05D006746 3.4e-48 197.2 342 41.2
THA.LOC104807095 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 5.8e-48 196.4 320 42.5
Phvul.002G142700 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 7.6e-48 196.1 313 43.1
arahy.Tifrunner.gnm1.ann1.072AWD Arachis hypogaea HOM05D005322 ORTHO05D006746 9.9e-48 195.7 300 43.0
arahy.Tifrunner.gnm1.ann1.BDDW1F Arachis hypogaea HOM05D005322 ORTHO05D006746 9.9e-48 195.7 300 43.0
Hund25262 Selenicereus undatus HOM05D005322 ORTHO05D006746 1.3e-47 195.3 459 34.6
MELO3C007693.2 Cucumis melo HOM05D005322 ORTHO05D006746 2.2e-47 194.5 588 31.8
Sc22g0002020 Simmondsia chinensis HOM05D005322 ORTHO05D006746 2.9e-47 194.1 356 39.6
MBI16_g26241_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 3.8e-47 193.7 414 37.4
AUR62044121 Chenopodium quinoa HOM05D005322 ORTHO05D006746 6.4e-47 193.0 325 39.7
Aa31LG6G14810 Aethionema arabicum HOM05D005322 ORTHO05D006746 1.1e-46 192.2 564 30.0
BcaB01g00273 Brassica carinata HOM05D005322 ORTHO05D006746 1.1e-46 192.2 323 41.8
Duzib147G0396 Durio zibethinus HOM05D005322 ORTHO05D006746 2.4e-46 191.0 322 41.6
Medtr7g076850 Medicago truncatula HOM05D005322 ORTHO05D006746 3.2e-46 190.7 323 42.1
MD01G1045600 Malus domestica HOM05D005322 ORTHO05D006746 5.4e-46 189.9 463 35.0
Glyma.01G019600 Glycine max HOM05D005322 ORTHO05D006746 7.1e-46 189.5 299 41.5
PSO210G4083 Papaver somniferum HOM05D005322 ORTHO05D006746 2.1e-45 188.0 409 37.9
PSO761G0065 Papaver somniferum HOM05D005322 ORTHO05D006746 7.8e-45 186.0 390 38.7
A09p46440 Brassica napus HOM05D005322 ORTHO05D006746 1.0e-44 185.7 289 43.3
BraA09t40109Z Brassica rapa HOM05D005322 ORTHO05D006746 1.0e-44 185.7 289 43.3
Ca_25206_v3 Cicer arietinum L. HOM05D005322 ORTHO05D006746 3.0e-44 184.1 407 38.1
PGSC0003DMG400000839 Solanum tuberosum HOM05D000365 ORTHO05D000154 3.0e-44 184.1 311 43.4
Sp5g08900 Schrenkiella parvula HOM05D005322 ORTHO05D006746 3.9e-44 183.7 325 42.2
Medtr5g030750 Medicago truncatula HOM05D005322 ORTHO05D006746 6.6e-44 183.0 283 41.3
EL10Ac6g13300 Beta vulgaris HOM05D005322 ORTHO05D006746 1.1e-43 182.2 454 34.8
Psat5g132240 Pisum sativum HOM05D005322 ORTHO05D006746 1.9e-43 181.4 273 43.6
Phvul.010G030900 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 2.5e-43 181.0 299 41.5
TPR.G30490 Trifolium pratense HOM05D005322 ORTHO05D006746 5.6e-43 179.9 327 39.8
Psat2g134960 Pisum sativum HOM05D005322 ORTHO05D006746 7.3e-43 179.5 319 38.2
C08p28800 Brassica napus HOM05D005322 ORTHO05D006746 1.6e-42 178.3 322 40.7
PGR031G1473 Punica granatum HOM05D005322 ORTHO05D006746 1.1e-41 175.6 323 39.9
BcaB01g00278 Brassica carinata HOM05D005322 ORTHO05D006746 1.8e-41 174.9 322 40.4
BolC8t50481H Brassica oleracea HOM05D005322 ORTHO05D006746 1.8e-41 174.9 322 40.4
Glyma.09G203100 Glycine max HOM05D005322 ORTHO05D006746 3.1e-41 174.1 294 38.1
Thhalv10010289m.g Eutrema salsugineum HOM05D005322 ORTHO05D006746 6.9e-41 172.9 485 34.6
AT3G53440 Arabidopsis thaliana HOM05D005322 ORTHO05D006746 2.0e-40 171.4 300 42.3
CARHR163340 Cardamine hirsuta HOM05D005322 ORTHO05D006746 5.8e-40 169.9 397 36.0
AL5G34360 Arabidopsis lyrata HOM05D005322 ORTHO05D006746 1.7e-39 168.3 341 38.1
Carub.0005s2001 Capsella rubella HOM05D005322 ORTHO05D006746 2.9e-39 167.5 409 36.2
Nitab4.5_0001888g0010 Nicotiana tabacum HOM05D005322 ORTHO05D006746 1.4e-38 165.2 253 43.5
unitig_62.g23938 Utricularia gibba HOM05D005322 ORTHO05D006746 7.1e-38 162.9 316 38.3
HPP92_000395 Vanilla planifolia HOM05D005322 ORTHO05D006746 1.7e-36 158.3 423 34.8
Zm00001eb297530 Zea mays HOM05D005322 ORTHO05D006746 1.6e-34 151.8 335 36.1
Nitab4.5_0008618g0020 Nicotiana tabacum HOM05D005322 ORTHO05D006746 3.6e-34 150.6 206 47.1
GSVIVG01008306001 Vitis vinifera HOM05D005322 ORTHO05D006746 6.9e-33 146.4 157 52.2
CDE01G0382 Ceratophyllum demersum HOM05D005322 ORTHO05D006746 9.9e-32 142.5 294 37.4
Actinidia36382 Actinidia chinensis HOM05D005322 ORTHO05D006746 2.2e-31 141.4 424 32.1
DCAR_025854 Daucus carota HOM05D005322 ORTHO05D006746 8.4e-31 139.4 245 40.0
Zm00001eb345110 Zea mays HOM05D005322 ORTHO05D006746 7.1e-30 136.3 278 36.3
SHI12143 Sapria himalayana HOM05D005322 ORTHO05D006746 1.1e-22 112.5 232 35.3
ATR0807G165 Amborella trichopoda HOM05D005322 ORTHO05D006746 1.2e-21 109.0 216 34.3
SEGI_16708 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 4.6e-21 107.1 333 30.9
Mapoly0062s0031 Marchantia polymorpha HOM05D005322 ORTHO05D006746 7.4e-19 99.8 445 26.3
VMungo0464G0122 Vigna mungo HOM05D000074 ORTHO05D006746 1.8e-17 95.1 248 32.3
SEGI_41064 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 2.4e-17 94.7 242 36.0
Rhsim10G0081400 Rhododendron simsii HOM05D005322 ORTHO05D006746 5.3e-17 93.6 459 26.6
Zm00001eb345140 Zea mays HOM05D005322 ORTHO05D006746 1.8e-12 78.6 274 28.1
AagrBONN_evm.TU.Sc2ySwM_368.532 Anthoceros agrestis HOM05D005322 ORTHO05D006746 2.5e-11 74.7 280 24.6
vmacro05480 Vaccinium macrocarpon HOM05D005322 ORTHO05D006746 3.1e-09 67.8 355 23.7
MBI16_g31813_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 3.4e-08 64.3 186 33.3
DCAR_025850 Daucus carota HOM05D005322 ORTHO05D006746 2.9e-07 61.2 55 56.4
VMungo1215G2194 Vigna mungo HOM05D005322 ORTHO05D006746 5.0e-07 60.5 47 59.6


User provided reference genes

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