Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold76G25041 Striga asiatica HOM05D005780 ORTHO05D007289 2.1e-183 645.6 328 100.0
SalBow6G1112 Salvia bowleyana HOM05D005780 ORTHO05D007289 8.1e-79 298.1 292 56.5
SalBow6G4646 Salvia bowleyana HOM05D005780 ORTHO05D007289 8.1e-79 298.1 292 56.5
MSTRG.8290 Avicennia marina HOM05D005780 ORTHO05D007289 1.1e-78 297.7 273 60.1
MSTRG.251 Avicennia marina HOM05D005780 ORTHO05D007289 2.4e-78 296.6 277 58.5
Migut.F01304 Erythranthe guttata HOM05D005780 ORTHO05D007289 2.4e-78 296.6 280 57.9
Oeu018986.1 Olea europaea HOM05D005780 ORTHO05D007289 2.2e-68 263.5 264 54.5
Dinv16281 Davidia involucrata HOM05D005780 ORTHO05D007289 6.1e-66 255.4 273 53.8
unitig_22.g6680 Utricularia gibba HOM05D005780 ORTHO05D007289 2.8e-63 246.5 261 51.7
Lj8A74T69 Lonicera japonica HOM05D005780 ORTHO05D007289 4.1e-62 242.7 168 70.2
Rhsim09G0170100 Rhododendron simsii HOM05D005780 ORTHO05D007289 1.5e-61 240.7 289 49.5
TAR623G0797 Trochodendron aralioides HOM05D005780 ORTHO05D007289 3.4e-61 239.6 169 71.0
Cc02_g07200 Coffea canephora HOM05D005780 ORTHO05D007289 4.5e-61 239.2 271 47.6
Gohir.A10G226266 Gossypium hirsutum HOM05D005780 ORTHO05D007289 1.0e-60 238.0 167 69.5
Gohir.D10G238600 Gossypium hirsutum HOM05D005780 ORTHO05D007289 1.3e-60 237.7 167 69.5
Gorai.011G274500 Gossypium raimondii HOM05D005780 ORTHO05D007289 1.3e-60 237.7 167 69.5
Duzib114G0105 Durio zibethinus HOM05D005780 ORTHO05D007289 2.9e-60 236.5 162 71.0
Prupe.2G243100 Prunus persica HOM05D005780 ORTHO05D007289 5.0e-60 235.7 168 66.1
Actinidia02380 Actinidia chinensis HOM05D005780 ORTHO05D007289 1.4e-59 234.2 258 51.6
Thecc.10G030600 Theobroma cacao HOM05D005780 ORTHO05D007289 1.9e-59 233.8 162 71.0
CANSAT56G3446 Cannabis sativa HOM05D005780 ORTHO05D007289 2.5e-59 233.4 165 67.9
GSVIVG01016433001 Vitis vinifera HOM05D005780 ORTHO05D007289 5.5e-59 232.3 271 50.9
Nitab4.5_0002822g0060 Nicotiana tabacum HOM05D005780 ORTHO05D007289 9.4e-59 231.5 157 72.0
Gohir.A10G226300 Gossypium hirsutum HOM05D005780 ORTHO05D007289 1.2e-58 231.1 269 50.9
Atru.chr12.271 Acer truncatum HOM05D005780 ORTHO05D007289 1.6e-58 230.7 165 67.3
Cfa001395 Carpinus fangiana HOM05D005780 ORTHO05D007289 2.7e-58 229.9 168 66.7
Cpa.g.sc19.252 Carica papaya HOM05D005780 ORTHO05D007289 6.1e-58 228.8 160 68.1
CiPaw.01G293600 Carya illinoinensis HOM05D005780 ORTHO05D007289 1.0e-57 228.0 168 66.7
Hund13812 Selenicereus undatus HOM05D005780 ORTHO05D007289 1.0e-57 228.0 157 72.6
Nn2g13534 Nelumbo nucifera HOM05D005780 ORTHO05D007289 2.3e-57 226.9 266 48.5
Sc14g0004720 Simmondsia chinensis HOM05D005780 ORTHO05D007289 2.3e-57 226.9 163 68.7
Ciclev10032579m.g Citrus clementina HOM05D005780 ORTHO05D007289 3.9e-57 226.1 167 66.5
Potri.008G062100 Populus trichocarpa HOM05D005780 ORTHO05D007289 5.1e-57 225.7 161 67.7
vmacro10198 Vaccinium macrocarpon HOM05D005780 ORTHO05D007289 6.7e-57 225.3 157 68.8
Solyc03g079850.4 Solanum lycopersicum HOM05D005780 ORTHO05D007289 3.3e-56 223.0 168 66.7
Sopen03g027310 Solanum pennellii HOM05D005780 ORTHO05D007289 3.3e-56 223.0 168 66.7
Eucgr.L02372 Eucalyptus grandis HOM05D005780 ORTHO05D007289 5.7e-56 222.2 161 68.3
Manes.07G122900 Manihot esculenta HOM05D005780 ORTHO05D007289 1.3e-55 221.1 159 66.0
Eucgr.J00968 Eucalyptus grandis HOM05D005780 ORTHO05D007289 2.8e-55 219.9 161 68.9
BcaC06g32303 Brassica carinata HOM05D005780 ORTHO05D007289 3.7e-55 219.5 161 63.4
C09p70870 Brassica napus HOM05D005780 ORTHO05D007289 3.7e-55 219.5 161 63.4
BolC9t59846H Brassica oleracea HOM05D005780 ORTHO05D007289 3.7e-55 219.5 161 63.4
PSO339G4705 Papaver somniferum HOM05D005780 ORTHO05D007289 3.7e-55 219.5 166 63.9
arahy.Tifrunner.gnm1.ann1.BF464R Arachis hypogaea HOM05D005780 ORTHO05D007289 4.8e-55 219.2 274 46.0
CAN.G115.6 Capsicum annuum HOM05D005780 ORTHO05D007289 4.8e-55 219.2 168 66.1
PGR044G2210 Punica granatum HOM05D005780 ORTHO05D007289 4.8e-55 219.2 177 63.3
PSO384G4288 Papaver somniferum HOM05D005780 ORTHO05D007289 6.3e-55 218.8 166 64.5
RcHm_v2.0_Chr1g0368881 Rosa chinensis HOM05D005780 ORTHO05D007289 1.4e-54 217.6 168 64.3
FvH4_7g23620 Fragaria vesca HOM05D005780 ORTHO05D007289 2.4e-54 216.9 168 63.1
MD01G1142100 Malus domestica HOM05D005780 ORTHO05D007289 2.4e-54 216.9 167 63.5
Haze_17154 Corylus avellana HOM05D005780 ORTHO05D007289 3.1e-54 216.5 204 55.4
Gohir.A13G017500 Gossypium hirsutum HOM05D005780 ORTHO05D007289 4.1e-54 216.1 167 63.5
FAN03G3464 Fragaria x ananassa HOM05D005780 ORTHO05D007289 6.9e-54 215.3 168 62.5
Sp6g36970 Schrenkiella parvula HOM05D005780 ORTHO05D007289 6.9e-54 215.3 161 63.4
Glyma.11G225300 Glycine max HOM05D005780 ORTHO05D007289 2.0e-53 213.8 265 46.4
Gohir.D13G018600 Gossypium hirsutum HOM05D005780 ORTHO05D007289 2.0e-53 213.8 167 62.9
HanXRQChr09g0246921 Helianthus annuus HOM05D005780 ORTHO05D007289 2.0e-53 213.8 164 61.6
Carub.0006s0481 Capsella rubella HOM05D005780 ORTHO05D007289 2.6e-53 213.4 168 61.9
Glyma.18G032000 Glycine max HOM05D005780 ORTHO05D007289 2.6e-53 213.4 265 46.8
Phvul.001G238600 Phaseolus vulgaris HOM05D005780 ORTHO05D007289 2.6e-53 213.4 267 46.8
AL6G15850 Arabidopsis lyrata HOM05D005780 ORTHO05D007289 3.4e-53 213.0 161 63.4
Lalb_Chr15g0084461 Lupinus albus HOM05D005780 ORTHO05D007289 3.4e-53 213.0 162 65.4
Aqoxy1G00787 Aquilegia oxysepala HOM05D005780 ORTHO05D007289 1.0e-52 211.5 160 63.8
Lsat_1_v5_gn_9_63040 Lactuca sativa HOM05D005780 ORTHO05D007289 1.7e-52 210.7 165 61.8
Sabra08G0045700 Salix brachista HOM05D005780 ORTHO05D007289 1.7e-52 210.7 198 54.5
Duzib128G1582 Durio zibethinus HOM05D005780 ORTHO05D007289 3.8e-52 209.5 268 48.5
Eucgr.I02190 Eucalyptus grandis HOM05D005780 ORTHO05D007289 6.5e-52 208.8 161 65.2
MELO3C008260.2 Cucumis melo HOM05D005780 ORTHO05D007289 8.5e-52 208.4 156 64.1
VMungo1383G0024 Vigna mungo HOM05D005780 ORTHO05D007289 8.5e-52 208.4 267 46.4
Lj6g0000720 Lotus japonicus HOM05D005780 ORTHO05D007289 1.1e-51 208.0 164 61.6
THA.LOC104816572 Tarenaya hassleriana HOM05D005780 ORTHO05D007289 1.1e-51 208.0 161 62.1
ATR0210G010 Amborella trichopoda HOM05D005780 ORTHO05D007289 1.4e-51 207.6 158 62.7
Thhalv10014411m.g Eutrema salsugineum HOM05D005780 ORTHO05D007289 2.5e-51 206.8 158 62.7
DCAR_011758 Daucus carota HOM05D005780 ORTHO05D007289 3.2e-51 206.5 157 62.4
HanXRQChr07g0202011 Helianthus annuus HOM05D005780 ORTHO05D007289 4.2e-51 206.1 164 62.2
Sed0009457 Sechium edule HOM05D005780 ORTHO05D007289 7.2e-51 205.3 162 61.1
THA.LOC104823134 Tarenaya hassleriana HOM05D005780 ORTHO05D007289 7.2e-51 205.3 161 62.1
Hma1.2p1_0039F.1_g024930 Hydrangea macrophylla HOM05D005780 ORTHO05D007289 9.4e-51 204.9 131 73.3
Hma1.2p1_0039F.1_g024940 Hydrangea macrophylla HOM05D005780 ORTHO05D007289 9.4e-51 204.9 131 73.3
Ca_17131_v3 Cicer arietinum L. HOM05D005780 ORTHO05D007289 1.2e-50 204.5 162 62.3
Aa31LG11G6960 Aethionema arabicum HOM05D005780 ORTHO05D007289 1.6e-50 204.1 177 57.6
CsaV3_6G001510 Cucumis sativus L. HOM05D005780 ORTHO05D007289 1.6e-50 204.1 162 61.1
COL.COLO4_25579 Corchorus olitorius HOM05D005780 ORTHO05D007289 2.1e-50 203.8 184 57.6
Sed0012096 Sechium edule HOM05D005780 ORTHO05D007289 2.1e-50 203.8 162 58.0
BraA10t45082Z Brassica rapa HOM05D005780 ORTHO05D007289 2.7e-50 203.4 180 55.6
MD07G1207800 Malus domestica HOM05D005780 ORTHO05D007289 4.7e-50 202.6 170 62.4
ECA238G2932 Erigeron canadensis HOM05D005780 ORTHO05D007289 1.4e-49 201.1 168 60.7
Psat5g125560 Pisum sativum HOM05D005780 ORTHO05D007289 2.3e-49 200.3 162 61.7
Lsat_1_v5_gn_2_117001 Lactuca sativa HOM05D005780 ORTHO05D007289 3.0e-49 199.9 160 63.8
TPR.G33709 Trifolium pratense HOM05D005780 ORTHO05D007289 5.2e-49 199.1 162 61.1
arahy.Tifrunner.gnm1.ann1.Y0QE0E Arachis hypogaea HOM05D005780 ORTHO05D007289 8.8e-49 198.4 317 39.7
Peaxi162Scf00140g01357 Petunia axillaris HOM05D005780 ORTHO05D007289 8.8e-49 198.4 131 72.5
Medtr3g069620 Medicago truncatula HOM05D005780 ORTHO05D007289 2.6e-48 196.8 269 43.5
ECA232G1234 Erigeron canadensis HOM05D005780 ORTHO05D007289 9.7e-48 194.9 267 43.1
Nitab4.5_0000399g0020 Nicotiana tabacum HOM05D005780 ORTHO05D007289 4.5e-45 186.0 147 64.6
EL10Ac2g04667 Beta vulgaris HOM05D005780 ORTHO05D007289 3.8e-44 183.0 173 55.5
MBI14_g02858_MAGBIO Magnolia biondii HOM05D005780 ORTHO05D007289 5.0e-44 182.6 253 45.5
Mapoly0001s0310 Marchantia polymorpha HOM05D005780 ORTHO05D007289 5.0e-44 182.6 180 52.2
Ah.16g102800 Amaranthus hybridus HOM05D005780 ORTHO05D007289 1.5e-43 181.0 135 67.4
Gorai.013G020600 Gossypium raimondii HOM05D005780 ORTHO05D007289 7.2e-43 178.7 142 62.0
Pp3c19_5660 Physcomitrium patens HOM05D005780 ORTHO05D007289 2.7e-42 176.8 165 52.7
HPP92_015198 Vanilla planifolia HOM05D005780 ORTHO05D007289 2.7e-42 176.8 160 54.4
Zm00001eb289450 Zea mays HOM05D005780 ORTHO05D007289 8.0e-42 175.3 160 55.0
Dinv34450 Davidia involucrata HOM05D005780 ORTHO05D007289 3.0e-41 173.3 221 46.6
FAN06G3968 Fragaria x ananassa HOM05D005780 ORTHO05D007289 4.4e-40 169.5 168 54.2
QL08p062087 Quercus lobata HOM05D005780 ORTHO05D007289 4.4e-40 169.5 130 62.3
Pp3c22_3300 Physcomitrium patens HOM05D005780 ORTHO05D007289 1.7e-39 167.5 162 50.6
Zm00001eb412440 Zea mays HOM05D005780 ORTHO05D007289 1.7e-39 167.5 160 53.1
ClCG11G006480 Citrullus lanatus HOM05D005780 ORTHO05D007289 5.3e-38 162.5 247 40.9
AagrBONN_evm.TU.Sc2ySwM_362.219 Anthoceros agrestis HOM05D005780 ORTHO05D007289 1.7e-36 157.5 159 49.1
SMO134G0044 Selaginella moellendorffii HOM05D005780 ORTHO05D007289 7.2e-35 152.1 162 50.0
CDE02G3808 Ceratophyllum demersum HOM05D005780 ORTHO05D007289 8.0e-34 148.7 129 58.9
vmacro07012 Vaccinium macrocarpon HOM05D005780 ORTHO05D007289 4.0e-33 146.4 160 51.9
Zm00001eb226980 Zea mays HOM05D005780 ORTHO05D007289 5.4e-30 136.0 129 51.9
Actinidia13899 Actinidia chinensis HOM05D005780 ORTHO05D007289 1.6e-29 134.4 162 50.6
CARHR207290 Cardamine hirsuta HOM05D005780 ORTHO05D007289 5.9e-29 132.5 110 56.4
Cre10.g457450 Chlamydomonas reinhardtii HOM05D005780 ORTHO05D007289 5.9e-29 132.5 182 38.5
AT5G05930 Arabidopsis thaliana HOM05D005780 ORTHO05D007289 2.9e-28 130.2 108 57.4
MCO05G626 Micromonas commoda HOM05D005780 ORTHO05D007289 5.5e-27 125.9 204 35.8
Zm00001eb265730 Zea mays HOM05D003504 ORTHO05D004006 4.0e-25 119.8 173 42.2
PRCOL_00006562 Prasinoderma coloniale HOM05D005780 ORTHO05D007289 3.4e-24 116.7 190 37.9
AUR62012166 Chenopodium quinoa HOM05D005780 ORTHO05D007289 2.9e-20 103.6 76 67.1
AUR62022803 Chenopodium quinoa HOM05D005780 ORTHO05D007289 2.9e-20 103.6 76 65.8
arahy.Tifrunner.gnm1.ann1.K2P72U Arachis hypogaea HOM05D005780 ORTHO05D006545 5.0e-20 102.8 102 52.9
FAN06G4825 Fragaria x ananassa HOM05D005780 ORTHO05D007289 2.5e-11 73.9 57 59.6
FAN10G2246 Fragaria x ananassa HOM05D005780 ORTHO05D007289 3.3e-11 73.6 57 59.6
FAN01G2814 Fragaria x ananassa HOM05D005780 ORTHO05D007289 1.2e-10 71.6 57 57.9
Rhsim03G0138300 Rhododendron simsii HOM05D005780 ORTHO05D007289 1.2e-08 65.1 159 34.6
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 2.0e-08 64.3 130 31.5
SEGI_25575 Sequoiadendron giganteum HOM05D005780 ORTHO05D007289 4.9e-07 59.7 57 47.4


User provided reference genes

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