Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 2.6e-178 628.6 323 100.0
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.5e-138 496.5 323 80.8
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 4.8e-132 474.9 321 79.1
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 3.0e-126 455.7 324 75.6
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 2.8e-124 449.1 322 73.0
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 5.5e-120 434.9 323 71.2
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.0e-118 430.6 325 72.0
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.4e-115 420.2 321 70.1
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.8e-115 419.9 326 70.2
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.4e-115 419.5 321 70.1
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 6.9e-115 417.9 320 70.3
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 1.2e-114 417.2 322 69.9
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 1.5e-114 416.8 321 70.4
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.7e-113 413.3 322 69.3
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 2.2e-113 412.9 324 68.2
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 5.0e-113 411.8 323 69.3
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.9e-112 409.8 326 69.0
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 5.5e-112 408.3 323 67.8
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 3.0e-110 402.5 326 66.6
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 3.0e-110 402.5 325 67.4
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 8.8e-110 401.0 322 67.1
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.1e-109 400.6 324 66.4
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.5e-109 400.2 325 66.8
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 2.0e-109 399.8 320 68.8
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.6e-109 399.4 325 66.8
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.3e-108 397.1 326 66.0
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.3e-108 397.1 325 66.2
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 1.7e-108 396.7 327 66.7
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 3.7e-108 395.6 314 69.1
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 3.7e-108 395.6 276 73.9
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 4.8e-108 395.2 323 66.9
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 1.4e-107 393.7 321 68.2
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.4e-107 393.7 346 63.0
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 2.4e-107 392.9 322 65.8
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.4e-107 392.9 326 65.0
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 3.1e-107 392.5 323 67.2
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 7.0e-107 391.3 327 66.4
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 5.9e-106 388.3 332 63.9
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.0e-105 387.5 331 65.0
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.9e-105 386.0 327 64.8
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 3.8e-105 385.6 329 64.4
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 3.8e-105 385.6 322 64.9
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 6.5e-105 384.8 335 63.9
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 8.5e-105 384.4 323 65.0
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-104 384.0 329 65.0
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.5e-104 383.6 326 65.0
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 2.5e-104 382.9 327 64.8
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.5e-104 382.9 335 63.3
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 3.2e-104 382.5 327 64.2
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 5.5e-104 381.7 323 65.3
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.2e-103 380.6 249 79.9
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.2e-103 380.6 259 75.3
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.1e-103 379.8 331 64.0
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 8.0e-103 377.9 331 64.4
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.0e-102 377.5 327 63.6
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.4e-102 377.1 329 64.1
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.4e-102 377.1 236 83.1
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.8e-102 376.7 330 63.9
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 2.3e-102 376.3 285 69.8
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 3.0e-102 375.9 330 64.2
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 3.0e-102 375.9 372 59.7
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 2.0e-101 373.2 259 74.9
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 4.4e-101 372.1 330 62.4
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 5.7e-101 371.7 335 61.5
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.3e-100 370.5 289 69.2
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.2e-100 369.8 259 73.7
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 2.2e-100 369.8 323 64.7
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.7e-100 369.0 328 63.1
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 3.7e-100 369.0 259 74.1
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.1e-99 367.5 321 62.9
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.8e-99 366.7 303 67.7
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.8e-99 366.7 328 61.9
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 2.4e-99 366.3 259 73.7
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.4e-99 366.3 333 61.3
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 4.1e-99 365.5 250 74.8
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 5.3e-99 365.2 357 57.7
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 5.3e-99 365.2 259 73.0
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.7e-97 360.1 290 67.2
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 1.1e-96 357.5 330 60.0
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 3.2e-96 355.9 259 71.4
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 9.4e-96 354.4 284 67.6
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 1.2e-95 354.0 236 77.1
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 8.0e-95 351.3 250 70.0
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 2.3e-94 349.7 258 66.7
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 3.4e-93 345.9 351 57.3
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 3.4e-93 345.9 292 65.4
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 6.3e-92 341.7 268 65.3
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 4.1e-91 339.0 289 62.6
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 2.0e-90 336.7 327 57.2
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 4.7e-87 325.5 221 75.1
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.0e-86 324.3 250 67.6
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 4.5e-82 308.9 232 67.2
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 5.6e-80 302.0 333 53.8
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 6.8e-78 295.0 216 66.2
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 1.3e-76 290.8 252 61.5
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.5e-74 282.7 215 69.8
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.9e-72 276.9 214 67.8
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 3.3e-72 276.2 223 65.9
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 6.2e-71 271.9 252 54.8
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.8e-70 270.4 262 51.9
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 3.4e-69 266.2 266 51.5
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 4.9e-68 262.3 184 72.8
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 1.9e-64 250.4 262 55.7
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.1e-62 243.0 263 46.8
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 9.9e-61 238.0 254 50.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.4e-59 234.2 253 47.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 5.4e-59 232.3 274 47.4
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 6.0e-58 228.8 124 96.0
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.9e-57 226.1 248 50.0
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 4.1e-51 206.1 256 42.2
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.2e-42 177.9 129 72.9
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.7e-42 176.8 245 40.0
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.8e-39 166.0 164 59.1
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 2.4e-38 163.7 245 37.1
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 3.2e-35 153.3 317 38.2
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.3e-25 121.3 243 31.3
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 5.8e-21 105.9 237 31.2
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 6.1e-10 69.3 84 56.0
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 2.8e-07 60.5 32 93.8
SEGI_14321 Sequoiadendron giganteum HOM05D006532 ORTHO05D385294 2.4e-06 57.4 43 62.8
SGA_v2.0_scaffold103G29991 Striga asiatica HOM05D006532 ORTHO05D405299 3.1e-06 57.0 72 54.2


User provided reference genes

Program Settings