Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24961 Striga asiatica HOM05D007762 ORTHO05D008066 1.9e-119 432.6 221 100.0
MSTRG.5650 Avicennia marina HOM05D007762 ORTHO05D008066 3.3e-15 86.3 241 34.0
Migut.L01955 Erythranthe guttata HOM05D007762 ORTHO05D008066 8.9e-13 78.2 210 35.2
QL07p048844 Quercus lobata HOM05D007762 ORTHO05D008066 2.9e-11 73.2 229 31.4
Dinv35582 Davidia involucrata HOM05D007762 ORTHO05D008066 2.1e-09 67.0 264 26.5
MSTRG.26781 Avicennia marina HOM05D007762 ORTHO05D008066 6.0e-09 65.5 251 29.9
PGR031G1528 Punica granatum HOM05D007762 ORTHO05D008066 1.0e-08 64.7 236 27.5
Atru.chr8.1998 Acer truncatum HOM05D007762 ORTHO05D008066 1.3e-08 64.3 263 28.1
Duzib106G0002 Durio zibethinus HOM05D007762 ORTHO05D008066 1.3e-08 64.3 247 26.3
Gorai.001G249600 Gossypium raimondii HOM05D007762 ORTHO05D008066 2.3e-08 63.5 232 27.6
THA.LOC104805538 Tarenaya hassleriana HOM05D007762 ORTHO05D008066 2.3e-08 63.5 207 30.9
CiPaw.10G146800 Carya illinoinensis HOM05D007762 ORTHO05D008066 3.0e-08 63.2 207 28.0
Migut.J00315 Erythranthe guttata HOM05D007762 ORTHO05D008066 3.0e-08 63.2 195 30.3
Gohir.A13G092305 Gossypium hirsutum HOM05D007762 ORTHO05D008066 3.0e-08 63.2 225 28.4
Gohir.A13G092310 Gossypium hirsutum HOM05D007762 ORTHO05D008066 3.0e-08 63.2 225 28.4
Actinidia11265 Actinidia chinensis HOM05D007762 ORTHO05D008066 3.9e-08 62.8 256 25.8
Oeu001858.1 Olea europaea HOM05D007762 ORTHO05D008066 3.9e-08 62.8 226 29.2
Gohir.D13G098400 Gossypium hirsutum HOM05D007762 ORTHO05D008066 5.1e-08 62.4 227 27.3
Hma1.2p1_1889F.1_g306660 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 5.1e-08 62.4 257 26.1
Hma1.2p1_2197F.1_g316916 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 5.1e-08 62.4 257 26.1
Cc06_g02460 Coffea canephora HOM05D007762 ORTHO05D008066 6.6e-08 62.0 260 28.8
Thhalv10017273m.g Eutrema salsugineum HOM05D005320 ORTHO05D008066 6.6e-08 62.0 179 31.8
arahy.Tifrunner.gnm1.ann1.LX2K9J Arachis hypogaea HOM05D007762 ORTHO05D008066 8.6e-08 61.6 210 28.6
vmacro20167 Vaccinium macrocarpon HOM05D007762 ORTHO05D008066 8.6e-08 61.6 233 29.2
Eucgr.A01283 Eucalyptus grandis HOM05D007762 ORTHO05D008066 1.9e-07 60.5 236 28.4
Sabra06G0066600 Salix brachista HOM05D007762 ORTHO05D003096 2.5e-07 60.1 261 26.1
GSVIVG01034144001 Vitis vinifera HOM05D007762 ORTHO05D008066 2.5e-07 60.1 259 28.2
Thecc.05G036900 Theobroma cacao HOM05D007762 ORTHO05D008066 3.3e-07 59.7 252 27.4
CAN.G92.14 Capsicum annuum HOM05D007762 ORTHO05D008066 4.3e-07 59.3 237 28.3
Solyc10g086560.3 Solanum lycopersicum HOM05D007762 ORTHO05D008066 4.3e-07 59.3 236 28.4
Sopen10g035940 Solanum pennellii HOM05D007762 ORTHO05D008066 5.6e-07 58.9 232 27.6
BcaB02g09262 Brassica carinata HOM05D005320 ORTHO05D008066 7.3e-07 58.5 180 30.0
Nitab4.5_0008097g0020 Nicotiana tabacum HOM05D007762 ORTHO05D008066 7.3e-07 58.5 257 26.8
Potri.006G087300 Populus trichocarpa HOM05D007762 ORTHO05D008066 9.6e-07 58.2 263 27.0
A05p08290 Brassica napus HOM05D005320 ORTHO05D008066 2.8e-06 56.6 186 32.3
CARHR131870 Cardamine hirsuta HOM05D005320 ORTHO05D008066 2.8e-06 56.6 181 31.5
Dinv37157 Davidia involucrata HOM05D007762 ORTHO05D008066 2.8e-06 56.6 265 25.7
Rhsim05G0194300 Rhododendron simsii HOM05D007762 ORTHO05D008066 2.8e-06 56.6 256 25.8
Oeu023077.1 Olea europaea HOM05D007762 ORTHO05D008066 3.6e-06 56.2 255 28.6
Peaxi162Scf00165g00078 Petunia axillaris HOM05D007762 ORTHO05D008066 3.6e-06 56.2 253 25.7
Lj3g0025123 Lotus japonicus HOM05D007762 ORTHO05D008066 4.7e-06 55.8 237 25.3
Manes.09G092000 Manihot esculenta HOM05D007762 ORTHO05D008066 4.7e-06 55.8 236 25.4
COL.COLO4_14776 Corchorus olitorius HOM05D007762 ORTHO05D008066 8.1e-06 55.1 228 27.2


User provided reference genes

Program Settings